RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 ITGA9Q13797 1035 aa19.48■□□□□ 0.71
CIRBP-220ENST00000588917 CSRP2Q16527 193 aa19.48■□□□□ 0.71
CIRBP-220ENST00000588917 DNAJC21Q5F1R6 531 aaKnown RBP19.48■□□□□ 0.71
CIRBP-220ENST00000588917 ADAMTSL4Q6UY14 1074 aa19.48■□□□□ 0.71
CIRBP-220ENST00000588917 ZNF534Q76KX8 674 aa19.48■□□□□ 0.71
CIRBP-220ENST00000588917 PTAR1Q7Z6K3 402 aaPredicted RBP19.48■□□□□ 0.71
CIRBP-220ENST00000588917 NETO1Q8TDF5 533 aa19.48■□□□□ 0.71
CIRBP-220ENST00000588917 SPATA16Q9BXB7 569 aa19.48■□□□□ 0.71
CIRBP-220ENST00000588917 DPH5Q9H2P9 285 aa19.48■□□□□ 0.71
CIRBP-220ENST00000588917 WDR26Q9H7D7 661 aa19.48■□□□□ 0.71
CIRBP-220ENST00000588917 ERVMER34-1Q9H9K5 563 aa19.48■□□□□ 0.71
CIRBP-220ENST00000588917 CAPN10Q9HC96 672 aa19.48■□□□□ 0.71
CIRBP-220ENST00000588917 GDF3Q9NR23 364 aa19.48■□□□□ 0.71
CIRBP-220ENST00000588917 PHPT1Q9NRX4 125 aaPredicted RBP19.48■□□□□ 0.71
CIRBP-220ENST00000588917 ANKRD6Q9Y2G4 727 aa19.48■□□□□ 0.71
CIRBP-220ENST00000588917 TCAF1Q9Y4C2 921 aa19.48■□□□□ 0.71
CIRBP-220ENST00000588917 CEP192Q8TEP8 1941 aa19.48■□□□□ 0.71
CIRBP-220ENST00000588917 GLYATL1P3A0A0U1RQE8 302 aa19.47■□□□□ 0.71
CIRBP-220ENST00000588917 H7C0S8 307 aa19.47■□□□□ 0.71
CIRBP-220ENST00000588917 ARHGAP33O14559 1287 aa19.47■□□□□ 0.71
CIRBP-220ENST00000588917 BUD23O43709 281 aaKnown RBP19.47■□□□□ 0.71
CIRBP-220ENST00000588917 PSMA3P25788 255 aa19.47■□□□□ 0.71
CIRBP-220ENST00000588917 MGAT1P26572 445 aa19.47■□□□□ 0.71
CIRBP-220ENST00000588917 MRPS25P82663 173 aaKnown RBP19.47■□□□□ 0.71
CIRBP-220ENST00000588917 TSTD2Q5T7W7 516 aa19.47■□□□□ 0.71
CIRBP-220ENST00000588917 RFLNAQ6ZTI6 216 aa19.47■□□□□ 0.71
CIRBP-220ENST00000588917 OXR1Q8N573 874 aa19.47■□□□□ 0.71
CIRBP-220ENST00000588917 NOA1Q8NC60 698 aaKnown RBP19.47■□□□□ 0.71
CIRBP-220ENST00000588917 PLA2G15Q8NCC3 412 aa19.47■□□□□ 0.71
CIRBP-220ENST00000588917 OR13H1Q8NG92 308 aa19.47■□□□□ 0.71
CIRBP-220ENST00000588917 NAT9Q9BTE0 207 aa19.47■□□□□ 0.71
CIRBP-220ENST00000588917 KIFC1Q9BW19 673 aa19.47■□□□□ 0.71
CIRBP-220ENST00000588917 TEX101Q9BY14 249 aa19.47■□□□□ 0.71
CIRBP-220ENST00000588917 FAM129AQ9BZQ8 928 aa19.47■□□□□ 0.71
CIRBP-220ENST00000588917 MRM3Q9HC36 420 aaKnown RBP19.47■□□□□ 0.71
CIRBP-220ENST00000588917 IL26Q9NPH9 171 aa19.47■□□□□ 0.71
CIRBP-220ENST00000588917 FAM114A2Q9NRY5 505 aa19.47■□□□□ 0.71
CIRBP-220ENST00000588917 TRPM6Q9BX84 2022 aa19.47■□□□□ 0.71
CIRBP-220ENST00000588917 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.46■□□□□ 0.71
CIRBP-220ENST00000588917 A0A1B0GVT2 93 aa19.46■□□□□ 0.71
CIRBP-220ENST00000588917 H0Y8X5 98 aa19.46■□□□□ 0.71
CIRBP-220ENST00000588917 SLC30A4O14863 429 aa19.46■□□□□ 0.71
CIRBP-220ENST00000588917 AVILO75366 819 aa19.46■□□□□ 0.71
CIRBP-220ENST00000588917 WNT1P04628 370 aa19.46■□□□□ 0.71
CIRBP-220ENST00000588917 MAGEA3P43357 314 aa19.46■□□□□ 0.71
CIRBP-220ENST00000588917 ZNF140P52738 457 aaPredicted RBP19.46■□□□□ 0.71
CIRBP-220ENST00000588917 ARL4CP56559 192 aa19.46■□□□□ 0.71
CIRBP-220ENST00000588917 CASC4Q6P4E1 433 aa19.46■□□□□ 0.71
CIRBP-220ENST00000588917 PRR23CQ6ZRP0 262 aa19.46■□□□□ 0.71
CIRBP-220ENST00000588917 CCNJLQ8IV13 435 aa19.46■□□□□ 0.71
CIRBP-220ENST00000588917 ZNF398Q8TD17 642 aa19.46■□□□□ 0.71
CIRBP-220ENST00000588917 LRRC39Q96DD0 335 aa19.46■□□□□ 0.71
CIRBP-220ENST00000588917 CDKN2AIPNLQ96HQ2 116 aa19.46■□□□□ 0.71
CIRBP-220ENST00000588917 HIC2Q96JB3 615 aa19.46■□□□□ 0.71
CIRBP-220ENST00000588917 FOXP3Q9BZS1 431 aa19.46■□□□□ 0.71
CIRBP-220ENST00000588917 CHRAC1Q9NRG0 131 aa19.46■□□□□ 0.71
CIRBP-220ENST00000588917 CA5BQ9Y2D0 317 aa19.46■□□□□ 0.71
CIRBP-220ENST00000588917 SLCO1B1Q9Y6L6 691 aa19.46■□□□□ 0.71
CIRBP-220ENST00000588917 SLC30A1Q9Y6M5 507 aa19.46■□□□□ 0.71
CIRBP-220ENST00000588917 TPRP12270 2363 aaKnown RBP19.46■□□□□ 0.71
CIRBP-220ENST00000588917 SPTY2D1-AS1A0A0U1RR47 76 aa19.45■□□□□ 0.7
CIRBP-220ENST00000588917 MYCLP1P12525 358 aaPredicted RBP19.45■□□□□ 0.7
CIRBP-220ENST00000588917 PAMP19021 973 aa19.45■□□□□ 0.7
CIRBP-220ENST00000588917 ATXN3P54252 364 aaPredicted RBP19.45■□□□□ 0.7
CIRBP-220ENST00000588917 NXPH1P58417 271 aa19.45■□□□□ 0.7
CIRBP-220ENST00000588917 KIAA1024LP59773 190 aa19.45■□□□□ 0.7
CIRBP-220ENST00000588917 IRX4P78413 519 aa19.45■□□□□ 0.7
CIRBP-220ENST00000588917 SLC7A5Q01650 507 aa19.45■□□□□ 0.7
CIRBP-220ENST00000588917 GUCY2DQ02846 1103 aa19.45■□□□□ 0.7
CIRBP-220ENST00000588917 CBLBQ13191 982 aa19.45■□□□□ 0.7
CIRBP-220ENST00000588917 PDE1CQ14123 709 aaPredicted RBP19.45■□□□□ 0.7
CIRBP-220ENST00000588917 NFATC4Q14934 902 aa19.45■□□□□ 0.7
CIRBP-220ENST00000588917 HIF1AQ16665 826 aa19.45■□□□□ 0.7
CIRBP-220ENST00000588917 GPR33Q49SQ1 333 aa19.45■□□□□ 0.7
CIRBP-220ENST00000588917 CCDC38Q502W7 563 aa19.45■□□□□ 0.7
CIRBP-220ENST00000588917 ALS2CLQ60I27 953 aa19.45■□□□□ 0.7
CIRBP-220ENST00000588917 OR13C4Q8NGS5 318 aa19.45■□□□□ 0.7
CIRBP-220ENST00000588917 SEC14L1Q92503 715 aa19.45■□□□□ 0.7
CIRBP-220ENST00000588917 ART4Q93070 314 aa19.45■□□□□ 0.7
CIRBP-220ENST00000588917 FUBP1Q96AE4 644 aaKnown RBP19.45■□□□□ 0.7
CIRBP-220ENST00000588917 VPS35Q96QK1 796 aa19.45■□□□□ 0.7
CIRBP-220ENST00000588917 GPR27Q9NS67 375 aa19.45■□□□□ 0.7
CIRBP-220ENST00000588917 SOX13Q9UN79 622 aa19.45■□□□□ 0.7
CIRBP-220ENST00000588917 OR1A2Q9Y585 309 aa19.45■□□□□ 0.7
CIRBP-220ENST00000588917 KCTD3Q9Y597 815 aa19.45■□□□□ 0.7
CIRBP-220ENST00000588917 FAM237BA0A1B0GVD1 139 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 PATE3B3GLJ2 98 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 K7ESM1 405 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 TNFRSF10CO14798 259 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 SRP72O76094 671 aaKnown RBP19.44■□□□□ 0.7
CIRBP-220ENST00000588917 SLC25A14O95258 325 aaPredicted RBP19.44■□□□□ 0.7
CIRBP-220ENST00000588917 CTSKP43235 329 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 TMPRSS15P98073 1019 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 CDK3Q00526 305 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 ACVR1Q04771 509 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 PTPRCAPQ14761 206 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 CCDC6Q16204 474 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 KIF19Q2TAC6 998 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 FAM151BQ6UXP7 276 aa19.44■□□□□ 0.7
CIRBP-220ENST00000588917 MACC1Q6ZN28 852 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms