RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 A0A096LPK6 155 aa25.91■■□□□ 1.74
SCAMP4-210ENST00000588555 AREL1O15033 823 aa25.91■■□□□ 1.74
SCAMP4-210ENST00000588555 SLC35E2BP0CK96 405 aa25.91■■□□□ 1.74
SCAMP4-210ENST00000588555 LSP1P33241 339 aa25.91■■□□□ 1.74
SCAMP4-210ENST00000588555 CA5AP35218 305 aa25.91■■□□□ 1.74
SCAMP4-210ENST00000588555 PSMD8P48556 350 aa25.91■■□□□ 1.74
SCAMP4-210ENST00000588555 CCT5P48643 541 aa25.91■■□□□ 1.74
SCAMP4-210ENST00000588555 HABP4Q5JVS0 413 aaKnown RBP25.91■■□□□ 1.74
SCAMP4-210ENST00000588555 HSD11B1LQ7Z5J1 315 aa25.91■■□□□ 1.74
SCAMP4-210ENST00000588555 SNX20Q7Z614 316 aa25.91■■□□□ 1.74
SCAMP4-210ENST00000588555 OLFM1Q99784 485 aa25.91■■□□□ 1.74
SCAMP4-210ENST00000588555 AGAP14A8MT82 685 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 PLK4O00444 970 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 PHGDHO43175 533 aaKnown RBP25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 ADAM23O75077 832 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 ADRB3P13945 408 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 SAT1P21673 171 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 SUOXP51687 545 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 RAB10P61026 200 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 CHRNA6Q15825 494 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 PUS10Q3MIT2 529 aaKnown RBP25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 RNF187Q5TA31 235 aaPredicted RBP25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 HECTD2Q5U5R9 776 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 ZDHHC20Q5W0Z9 365 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 FBXL19Q6PCT2 694 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 LVRNQ6Q4G3 990 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 MSANTD3Q96H12 275 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 HDAC8Q9BY41 377 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 VPS11Q9H270 941 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 CAMSAP3Q9P1Y5 1249 aaPredicted RBP25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 GRID1Q9ULK0 1009 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 NDUFS3O75489 264 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 DHRS4L1P0CG22 281 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 STMN1P16949 149 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 ITGALP20701 1170 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 SATB1Q01826 763 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 FAM46CQ5VWP2 391 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 LIPIQ6XZB0 460 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 ERN2Q76MJ5 926 aaKnown RBP25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 FAM111AQ96PZ2 611 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 CCDC134Q9H6E4 229 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 ASB8Q9H765 288 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 PKD2L2Q9NZM6 624 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 FAM50BQ9Y247 325 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 VPS9D1Q9Y2B5 631 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 VWA7Q9Y334 891 aa25.9■■□□□ 1.74
SCAMP4-210ENST00000588555 PLXNA2O75051 1894 aa25.89■■□□□ 1.73
SCAMP4-210ENST00000588555 GLRA3O75311 464 aa25.89■■□□□ 1.73
SCAMP4-210ENST00000588555 CDKN2DP55273 166 aa25.89■■□□□ 1.73
SCAMP4-210ENST00000588555 IRF9Q00978 393 aa25.89■■□□□ 1.73
SCAMP4-210ENST00000588555 ZNF460Q14592 562 aa25.89■■□□□ 1.73
SCAMP4-210ENST00000588555 INSCQ1MX18 579 aa25.89■■□□□ 1.73
SCAMP4-210ENST00000588555 KIAA1211LQ6NV74 962 aa25.89■■□□□ 1.73
SCAMP4-210ENST00000588555 CERS6Q6ZMG9 384 aa25.89■■□□□ 1.73
SCAMP4-210ENST00000588555 TAS2R42Q7RTR8 314 aa25.89■■□□□ 1.73
SCAMP4-210ENST00000588555 PLD6Q8N2A8 252 aaKnown RBP25.89■■□□□ 1.73
SCAMP4-210ENST00000588555 GDAP1Q8TB36 358 aa25.89■■□□□ 1.73
SCAMP4-210ENST00000588555 IQCGQ9H095 443 aaKnown RBP25.89■■□□□ 1.73
SCAMP4-210ENST00000588555 DYRK4Q9NR20 520 aa25.89■■□□□ 1.73
SCAMP4-210ENST00000588555 NFKBIL1Q9UBC1 381 aaPredicted RBP25.89■■□□□ 1.73
SCAMP4-210ENST00000588555 DCDC2Q9UHG0 476 aa25.89■■□□□ 1.73
SCAMP4-210ENST00000588555 H0Y858 1186 aa25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 OR1I1O60431 355 aa25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 SYNCRIPO60506 623 aaKnown RBP25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 GM2AP17900 193 aa25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 UGT1A6P19224 532 aa25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 UGT1A1P22309 533 aa25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 UGT1A4P22310 534 aa25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 CRABP2P29373 138 aa25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 DRD3P35462 400 aa25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 UGT1A3P35503 534 aa25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 UGT1A5P35504 534 aa25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 P2RY2P41231 377 aa25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 COPAP53621 1224 aa25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 DCDC1P59894 354 aa25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 TIAL1Q01085 375 aaKnown RBP eCLIP25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 GABPB1Q06547 395 aaPredicted RBP25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 CST6Q15828 149 aa25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 DBN1Q16643 649 aa25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 GPR33Q49SQ1 333 aa25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 SLC44A4Q53GD3 710 aa25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 FAM45BPQ6NSW5 357 aa25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 FAM45AQ8TCE6 357 aa25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 ZNF398Q8TD17 642 aa25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 BIRC8Q96P09 236 aa25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 AARSD1Q9BTE6 412 aaKnown RBP25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 C1QTNF1Q9BXJ1 281 aa25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 CD248Q9HCU0 757 aa25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 EMCNQ9ULC0 261 aa25.88■■□□□ 1.73
SCAMP4-210ENST00000588555 UBA6A0AVT1 1052 aaPredicted RBP25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 GOLGA8CPA6NN73 597 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 ADARP55265 1226 aaKnown RBP25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 ELP6Q0PNE2 266 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 CNTN1Q12860 1018 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 CCINQ13939 588 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 TERF2Q15554 542 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 Q6ZVL8 140 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 RAPH1Q70E73 1250 aa25.87■■□□□ 1.73
SCAMP4-210ENST00000588555 TECPR1Q7Z6L1 1165 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms