RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 WISP3O95389 354 aaPredicted RBP19.76■□□□□ 0.75
TRIM47-204ENST00000587339 CTSLP07711 333 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 CHRM1P11229 460 aaPredicted RBP19.76■□□□□ 0.75
TRIM47-204ENST00000587339 LHCGRP22888 699 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 PPARGP37231 505 aaPredicted RBP19.76■□□□□ 0.75
TRIM47-204ENST00000587339 SPAM1P38567 509 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 PTGER3P43115 390 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 SLC1A6P48664 564 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 SUOXP51687 545 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 TIAL1Q01085 375 aaKnown RBP eCLIP19.76■□□□□ 0.75
TRIM47-204ENST00000587339 NFATC2Q13469 925 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 LRRC73Q5JTD7 316 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 PARM1Q6UWI2 310 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 TMEM207Q6UWW9 146 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 TRPM8Q7Z2W7 1104 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 STK40Q8N2I9 435 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 TERB1Q8NA31 727 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 FGF14Q92915 247 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 FAM136AQ96C01 138 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 ASB8Q9H765 288 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 FAM50BQ9Y247 325 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 USH1CQ9Y6N9 552 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 CCT8L1PA6NM43 557 aa19.75■□□□□ 0.75
TRIM47-204ENST00000587339 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.75■□□□□ 0.75
TRIM47-204ENST00000587339 GAPDHSO14556 408 aaPredicted RBP19.75■□□□□ 0.75
TRIM47-204ENST00000587339 RHOBTB1O94844 696 aa19.75■□□□□ 0.75
TRIM47-204ENST00000587339 ITGALP20701 1170 aa19.75■□□□□ 0.75
TRIM47-204ENST00000587339 GJA4P35212 333 aa19.75■□□□□ 0.75
TRIM47-204ENST00000587339 ADARP55265 1226 aaKnown RBP19.75■□□□□ 0.75
TRIM47-204ENST00000587339 PTSQ03393 145 aa19.75■□□□□ 0.75
TRIM47-204ENST00000587339 ACAP2Q15057 778 aa19.75■□□□□ 0.75
TRIM47-204ENST00000587339 CTC1Q2NKJ3 1217 aa19.75■□□□□ 0.75
TRIM47-204ENST00000587339 FNDC3BQ53EP0 1204 aaKnown RBP19.75■□□□□ 0.75
TRIM47-204ENST00000587339 CCDC121Q6ZUS5 278 aa19.75■□□□□ 0.75
TRIM47-204ENST00000587339 SNX20Q7Z614 316 aa19.75■□□□□ 0.75
TRIM47-204ENST00000587339 ZNF398Q8TD17 642 aa19.75■□□□□ 0.75
TRIM47-204ENST00000587339 C10orf82Q8WW14 230 aa19.75■□□□□ 0.75
TRIM47-204ENST00000587339 PBXIP1Q96AQ6 731 aa19.75■□□□□ 0.75
TRIM47-204ENST00000587339 RMDN2Q96LZ7 410 aa19.75■□□□□ 0.75
TRIM47-204ENST00000587339 TTC1Q99614 292 aa19.75■□□□□ 0.75
TRIM47-204ENST00000587339 B4GALT6Q9UBX8 382 aa19.75■□□□□ 0.75
TRIM47-204ENST00000587339 TBC1D3BA6NDS4 549 aa19.74■□□□□ 0.75
TRIM47-204ENST00000587339 PKMP14618 531 aaKnown RBP19.74■□□□□ 0.75
TRIM47-204ENST00000587339 ZNF37AP17032 561 aaPredicted RBP19.74■□□□□ 0.75
TRIM47-204ENST00000587339 ZNF805Q5CZA5 627 aa19.74■□□□□ 0.75
TRIM47-204ENST00000587339 SPNS2Q8IVW8 549 aa19.74■□□□□ 0.75
TRIM47-204ENST00000587339 KDM1BQ8NB78 822 aa19.74■□□□□ 0.75
TRIM47-204ENST00000587339 OR6Y1Q8NGX8 325 aa19.74■□□□□ 0.75
TRIM47-204ENST00000587339 RFWD2Q8NHY2 731 aa19.74■□□□□ 0.75
TRIM47-204ENST00000587339 MTF2Q9Y483 593 aaPredicted RBP19.74■□□□□ 0.75
TRIM47-204ENST00000587339 DOCK8Q8NF50 2099 aa19.74■□□□□ 0.75
TRIM47-204ENST00000587339 A0A0G2JND7 137 aa19.74■□□□□ 0.75
TRIM47-204ENST00000587339 ITM2AO43736 263 aa19.74■□□□□ 0.75
TRIM47-204ENST00000587339 H2AFYO75367 372 aaKnown RBP19.74■□□□□ 0.75
TRIM47-204ENST00000587339 RBP1P09455 135 aa19.74■□□□□ 0.75
TRIM47-204ENST00000587339 NFKBIAP25963 317 aa19.74■□□□□ 0.75
TRIM47-204ENST00000587339 GDI1P31150 447 aa19.74■□□□□ 0.75
TRIM47-204ENST00000587339 OPRD1P41143 372 aa19.74■□□□□ 0.75
TRIM47-204ENST00000587339 PTPN5P54829 565 aa19.74■□□□□ 0.75
TRIM47-204ENST00000587339 TECRLQ5HYJ1 363 aa19.74■□□□□ 0.75
TRIM47-204ENST00000587339 LIPMQ5VYY2 423 aa19.74■□□□□ 0.75
TRIM47-204ENST00000587339 NAIF1Q69YI7 327 aaPredicted RBP19.74■□□□□ 0.75
TRIM47-204ENST00000587339 SERPINA9Q86WD7 417 aa19.74■□□□□ 0.75
TRIM47-204ENST00000587339 PHTF2Q8N3S3 785 aa19.74■□□□□ 0.75
TRIM47-204ENST00000587339 GPR26Q8NDV2 337 aa19.74■□□□□ 0.75
TRIM47-204ENST00000587339 CCT6BQ92526 530 aa19.74■□□□□ 0.75
TRIM47-204ENST00000587339 POMKQ9H5K3 350 aa19.74■□□□□ 0.75
TRIM47-204ENST00000587339 SYTL2Q9HCH5 934 aa19.74■□□□□ 0.75
TRIM47-204ENST00000587339 MED16Q9Y2X0 877 aa19.74■□□□□ 0.75
TRIM47-204ENST00000587339 KIF26AQ9ULI4 1882 aaPredicted RBP19.74■□□□□ 0.75
TRIM47-204ENST00000587339 TSPAN11A1L157 253 aa19.73■□□□□ 0.75
TRIM47-204ENST00000587339 LYPLA1O75608 230 aaPredicted RBP19.73■□□□□ 0.75
TRIM47-204ENST00000587339 ESR1P03372 595 aa19.73■□□□□ 0.75
TRIM47-204ENST00000587339 PYGLP06737 847 aa19.73■□□□□ 0.75
TRIM47-204ENST00000587339 MTHFRP42898 656 aa19.73■□□□□ 0.75
TRIM47-204ENST00000587339 PRKAA2P54646 552 aa19.73■□□□□ 0.75
TRIM47-204ENST00000587339 ARHGEF7Q14155 803 aa19.73■□□□□ 0.75
TRIM47-204ENST00000587339 HNRNPA1L2Q32P51 320 aaKnown RBP19.73■□□□□ 0.75
TRIM47-204ENST00000587339 CHRDL2Q6WN34 429 aa19.73■□□□□ 0.75
TRIM47-204ENST00000587339 SFTPA1Q8IWL2 248 aa19.73■□□□□ 0.75
TRIM47-204ENST00000587339 PPP4R1Q8TF05 950 aa19.73■□□□□ 0.75
TRIM47-204ENST00000587339 ABCF3Q9NUQ8 709 aa19.73■□□□□ 0.75
TRIM47-204ENST00000587339 PRDM4Q9UKN5 801 aa19.73■□□□□ 0.75
TRIM47-204ENST00000587339 COMMD10Q9Y6G5 202 aa19.73■□□□□ 0.75
TRIM47-204ENST00000587339 UPK3BL1B0FP48 263 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 UPK3BL2E5RIL1 263 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 PRMT5O14744 637 aaPredicted RBP19.72■□□□□ 0.75
TRIM47-204ENST00000587339 VPS26AO75436 327 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 KITP10721 976 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 CYP2A6P11509 494 aaPredicted RBP19.72■□□□□ 0.75
TRIM47-204ENST00000587339 ZNF30P17039 623 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 TFEBP19484 476 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 XPAP23025 273 aaPredicted RBP19.72■□□□□ 0.75
TRIM47-204ENST00000587339 ABCE1P61221 599 aaKnown RBP19.72■□□□□ 0.75
TRIM47-204ENST00000587339 ZNF234Q14588 700 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 CHRNA6Q15825 494 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 GPR33Q49SQ1 333 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 CTSL3PQ5NE16 218 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 ZDHHC20Q5W0Z9 365 aa19.72■□□□□ 0.75
TRIM47-204ENST00000587339 NAPRTQ6XQN6 538 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms