RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 DCDC1P59894 354 aa13.8□□□□□ -0.2
TRAF4-215ENST00000584944 TMPRSS15P98073 1019 aa13.8□□□□□ -0.2
TRAF4-215ENST00000584944 GRIK2Q13002 908 aa13.8□□□□□ -0.2
TRAF4-215ENST00000584944 ITGA9Q13797 1035 aa13.8□□□□□ -0.2
TRAF4-215ENST00000584944 KCNJ11Q14654 390 aa13.8□□□□□ -0.2
TRAF4-215ENST00000584944 CCDC38Q502W7 563 aa13.8□□□□□ -0.2
TRAF4-215ENST00000584944 DNAJC21Q5F1R6 531 aaKnown RBP13.8□□□□□ -0.2
TRAF4-215ENST00000584944 FAM151BQ6UXP7 276 aa13.8□□□□□ -0.2
TRAF4-215ENST00000584944 GCNT7Q6ZNI0 430 aa13.8□□□□□ -0.2
TRAF4-215ENST00000584944 ZNF572Q7Z3I7 529 aaPredicted RBP13.8□□□□□ -0.2
TRAF4-215ENST00000584944 ABI3BPQ7Z7G0 1075 aa13.8□□□□□ -0.2
TRAF4-215ENST00000584944 HOOK3Q86VS8 718 aa13.8□□□□□ -0.2
TRAF4-215ENST00000584944 PDIK1LQ8N165 341 aa13.8□□□□□ -0.2
TRAF4-215ENST00000584944 OTUD6BQ8N6M0 293 aa13.8□□□□□ -0.2
TRAF4-215ENST00000584944 OR4K2Q8NGD2 314 aa13.8□□□□□ -0.2
TRAF4-215ENST00000584944 CPT1BQ92523 772 aa13.8□□□□□ -0.2
TRAF4-215ENST00000584944 SCAMP4Q969E2 229 aa13.8□□□□□ -0.2
TRAF4-215ENST00000584944 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.8□□□□□ -0.2
TRAF4-215ENST00000584944 KLF6Q99612 283 aaPredicted RBP13.8□□□□□ -0.2
TRAF4-215ENST00000584944 TTC1Q99614 292 aa13.8□□□□□ -0.2
TRAF4-215ENST00000584944 APOOQ9BUR5 198 aa13.8□□□□□ -0.2
TRAF4-215ENST00000584944 FRMD8Q9BZ67 464 aaPredicted RBP13.8□□□□□ -0.2
TRAF4-215ENST00000584944 SLC13A1Q9BZW2 595 aa13.8□□□□□ -0.2
TRAF4-215ENST00000584944 ABCG8Q9H221 673 aa13.8□□□□□ -0.2
TRAF4-215ENST00000584944 DPH5Q9H2P9 285 aa13.8□□□□□ -0.2
TRAF4-215ENST00000584944 CASS4Q9NQ75 786 aa13.8□□□□□ -0.2
TRAF4-215ENST00000584944 MAD1L1Q9Y6D9 718 aa13.8□□□□□ -0.2
TRAF4-215ENST00000584944 SLC30A1Q9Y6M5 507 aa13.8□□□□□ -0.2
TRAF4-215ENST00000584944 TRPM6Q9BX84 2022 aa13.8□□□□□ -0.2
TRAF4-215ENST00000584944 CCDC78A2IDD5 438 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 DNALI1O14645 258 aaPredicted RBP13.79□□□□□ -0.2
TRAF4-215ENST00000584944 AURKAO14965 403 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 INPP4BO15327 924 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 RAD51CO43502 376 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 MYCLP1P12525 358 aaPredicted RBP13.79□□□□□ -0.2
TRAF4-215ENST00000584944 MLNP12872 115 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 CEACAM1P13688 526 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 BPIP17213 487 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 PAMP19021 973 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 ITGALP20701 1170 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 CSRP1P21291 193 aaKnown RBP13.79□□□□□ -0.2
TRAF4-215ENST00000584944 BLKP51451 505 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 NXPH1P58417 271 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 PRAMEP78395 509 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 DPTQ07507 201 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 MORF4L2Q15014 288 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 KCTD19Q17RG1 926 aaPredicted RBP13.79□□□□□ -0.2
TRAF4-215ENST00000584944 KIF19Q2TAC6 998 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 PCID2Q5JVF3 399 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 CERCAMQ5T4B2 595 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 DENND5AQ6IQ26 1287 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 LRRC8BQ6P9F7 803 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 DOK6Q6PKX4 331 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 RD3Q7Z3Z2 195 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 TECPR1Q7Z6L1 1165 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 PARGQ86W56 976 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 HEATR4Q86WZ0 1026 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 PHYKPLQ8IUZ5 450 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 KLHDC8BQ8IXV7 354 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 TTC30BQ8N4P2 665 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 TRAM1L1Q8N609 369 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 PLA2G15Q8NCC3 412 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 GPR26Q8NDV2 337 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 MCUQ8NE86 351 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 C1orf216Q8TAB5 229 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 HIC2Q96JB3 615 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 WDR92Q96MX6 357 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 ORAI3Q9BRQ5 295 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 ERP44Q9BS26 406 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 ZCCHC2Q9C0B9 1178 aaKnown RBP13.79□□□□□ -0.2
TRAF4-215ENST00000584944 GAREM1Q9H706 876 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 CAPN10Q9HC96 672 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 KLQ9UEF7 1012 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 WASF3Q9UPY6 502 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 SNX11Q9Y5W9 270 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 SLCO1B1Q9Y6L6 691 aa13.79□□□□□ -0.2
TRAF4-215ENST00000584944 CEP192Q8TEP8 1941 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 CACNA1EQ15878 2313 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 MAGEB16A2A368 324 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 SDR42E2A6NKP2 422 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 YKT6O15498 198 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 SLC25A14O95258 325 aaPredicted RBP13.78□□□□□ -0.2
TRAF4-215ENST00000584944 PRAMEF1O95521 474 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 CTSEP14091 401 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 MGAT1P26572 445 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 GRIA1P42261 906 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 MAGEA6P43360 314 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 ARL4CP56559 192 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 MRPS25P82663 173 aaKnown RBP13.78□□□□□ -0.2
TRAF4-215ENST00000584944 CAV1Q03135 178 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 PPARDQ03181 441 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 GTF2H3Q13889 308 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 NFATC4Q14934 902 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 SUZ12Q15022 739 aaKnown RBP13.78□□□□□ -0.2
TRAF4-215ENST00000584944 CDKN3Q16667 212 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 HLA-BQ31612 363 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 INAVAQ3KP66 663 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 UAP1L1Q3KQV9 507 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 ZRANB3Q5FWF4 1079 aa13.78□□□□□ -0.2
TRAF4-215ENST00000584944 ANKRD22Q5VYY1 191 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms