RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 ACVR1Q04771 509 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 OR4D1Q15615 310 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 SLC14A2Q15849 920 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 ZNF678Q5SXM1 525 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 PAQR3Q6TCH7 311 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 CPSF7Q8N684 471 aaKnown RBP13.63□□□□□ -0.23
SRSF1-205ENST00000582730 PCDH20Q8N6Y1 951 aaKnown RBP13.63□□□□□ -0.23
SRSF1-205ENST00000582730 TDRD1Q9BXT4 1180 aaKnown RBP13.63□□□□□ -0.23
SRSF1-205ENST00000582730 EPB41L1Q9H4G0 881 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 NDUFA13Q9P0J0 144 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 FKBPLQ9UIM3 349 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 VPS28Q9UK41 221 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 C15orf38-AP3S2A0A0A6YYH1 394 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 ILVBLA1L0T0 632 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 PPP6CO00743 305 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 VILLO15195 856 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 ZSCAN9O15535 394 aaPredicted RBP13.63□□□□□ -0.23
SRSF1-205ENST00000582730 TMCC1O94876 653 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 SMIM18P0DKX4 95 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 IMPDH2P12268 514 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 OGNP20774 298 aaKnown RBP13.63□□□□□ -0.23
SRSF1-205ENST00000582730 SMAD3P84022 425 aaKnown RBP13.63□□□□□ -0.23
SRSF1-205ENST00000582730 FLOT2Q14254 428 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 FASTKQ14296 549 aaKnown RBP13.63□□□□□ -0.23
SRSF1-205ENST00000582730 CYTH1Q15438 398 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 LAYNQ6UX15 382 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 ARPINQ7Z6K5 226 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 GALNT7Q86SF2 657 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 FAM156AQ8NDB6 213 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 AARSD1Q9BTE6 412 aaKnown RBP13.63□□□□□ -0.23
SRSF1-205ENST00000582730 MID1IP1Q9NPA3 183 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 RHBDL2Q9NX52 303 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 PTTG2Q9NZH5 202 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 PFDN1O60925 122 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 XRCC1P18887 633 aaPredicted RBP13.62□□□□□ -0.23
SRSF1-205ENST00000582730 MZF1P28698 734 aaPredicted RBP13.62□□□□□ -0.23
SRSF1-205ENST00000582730 XIAPP98170 497 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 FOLH1Q04609 750 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 PTPRNQ16849 979 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 UNC50Q53HI1 259 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 AFTPHQ6ULP2 937 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 RBM44Q6ZP01 1051 aaKnown RBP13.62□□□□□ -0.23
SRSF1-205ENST00000582730 DDIASQ8IXT1 998 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 REM2Q8IYK8 340 aaPredicted RBP13.62□□□□□ -0.23
SRSF1-205ENST00000582730 CRIPAKQ8N1N5 446 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 OR6K2Q8NGY2 324 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 NSUN5Q96P11 429 aaKnown RBP13.62□□□□□ -0.23
SRSF1-205ENST00000582730 MRPL1Q9BYD6 325 aaKnown RBP13.62□□□□□ -0.23
SRSF1-205ENST00000582730 RNF208Q9H0X6 261 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 ZNF385DQ9H6B1 395 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 FBRSL1Q9HCM7 1045 aaKnown RBP13.62□□□□□ -0.23
SRSF1-205ENST00000582730 NLE1Q9NVX2 485 aaPredicted RBP13.62□□□□□ -0.23
SRSF1-205ENST00000582730 POLR3BQ9NW08 1133 aaPredicted RBP13.62□□□□□ -0.23
SRSF1-205ENST00000582730 RNF112Q9ULX5 631 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 PRPF19Q9UMS4 504 aaKnown RBP13.62□□□□□ -0.23
SRSF1-205ENST00000582730 STX7O15400 261 aaKnown RBP13.62□□□□□ -0.23
SRSF1-205ENST00000582730 GNRH1P01148 92 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 MC4RP32245 332 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 ZNF140P52738 457 aaPredicted RBP13.62□□□□□ -0.23
SRSF1-205ENST00000582730 HERVK_113P63132 956 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 MRPS22P82650 360 aaKnown RBP13.62□□□□□ -0.23
SRSF1-205ENST00000582730 GRAMD1BQ3KR37 738 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 TAS2R42Q7RTR8 314 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 TRPC4APQ8TEL6 797 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 GCNAQ96QF7 691 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 GPR21Q99679 349 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 ERVK-6Q9BXR3 956 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 TM6SF2Q9BZW4 377 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 TAS2R13Q9NYV9 303 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 FCF1Q9Y324 198 aaKnown RBP13.62□□□□□ -0.23
SRSF1-205ENST00000582730 PTGDR2Q9Y5Y4 395 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 BACE2Q9Y5Z0 518 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 PSMD12O00232 456 aaPredicted RBP13.62□□□□□ -0.23
SRSF1-205ENST00000582730 GPR39O43194 453 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 CRCPO75575 148 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 TFAP2AP05549 437 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 ARF5P84085 180 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 ARHGEF6Q15052 776 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 TAF1AQ15573 450 aaPredicted RBP13.62□□□□□ -0.23
SRSF1-205ENST00000582730 KIF19Q2TAC6 998 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 C5orf22Q49AR2 442 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 ATXN7L2Q5T6C5 722 aaPredicted RBP13.62□□□□□ -0.23
SRSF1-205ENST00000582730 RBM12BQ8IXT5 1001 aaKnown RBP13.62□□□□□ -0.23
SRSF1-205ENST00000582730 OR9I1Q8NGQ6 314 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 MAELQ96JY0 434 aaKnown RBP13.62□□□□□ -0.23
SRSF1-205ENST00000582730 SLC22A12Q96S37 553 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 DDX18Q9NVP1 670 aaKnown RBP13.62□□□□□ -0.23
SRSF1-205ENST00000582730 STK39Q9UEW8 545 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 GIMAP2Q9UG22 337 aa13.62□□□□□ -0.23
SRSF1-205ENST00000582730 CCDC160A6NGH7 325 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 PRLP01236 227 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 LPOP22079 712 aaPredicted RBP13.61□□□□□ -0.23
SRSF1-205ENST00000582730 RHOAP61586 193 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 TIAL1Q01085 375 aaKnown RBP eCLIP13.61□□□□□ -0.235e-9■■□□□ 13.3
SRSF1-205ENST00000582730 CDH18Q13634 790 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 PSAPL1Q6NUJ1 521 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 PGAM4Q8N0Y7 254 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 ICA1LQ8NDH6 482 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 GPR150Q8NGU9 434 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 PEX13Q92968 403 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms