RNA–Protein interactions for RNA: ENST00000576390.5

P4HB-223, Transcript of prolyl 4-hydroxylase subunit beta, human

TSL 4 BASIC

Gene P4HB, Length 439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
P4HB-223	ENST00000576390	PCDHGA3	Q9Y5H0	932 aa		18.83	■□□□□ 0.6
P4HB-223	ENST00000576390	MYO1F	O00160	1098 aa		18.82	■□□□□ 0.6
P4HB-223	ENST00000576390	MATN3	O15232	486 aa		18.82	■□□□□ 0.6
P4HB-223	ENST00000576390	PYGL	P06737	847 aa		18.82	■□□□□ 0.6
P4HB-223	ENST00000576390	THRA	P10827	490 aa		18.82	■□□□□ 0.6
P4HB-223	ENST00000576390	FGF3	P11487	239 aa	Predicted RBP	18.82	■□□□□ 0.6
P4HB-223	ENST00000576390	KRT10	P13645	584 aa		18.82	■□□□□ 0.6
P4HB-223	ENST00000576390	CES1	P23141	567 aa		18.82	■□□□□ 0.6
P4HB-223	ENST00000576390	CCNC	P24863	283 aa		18.82	■□□□□ 0.6
P4HB-223	ENST00000576390	CSF2RB	P32927	897 aa		18.82	■□□□□ 0.6
P4HB-223	ENST00000576390	FASLG	P48023	281 aa		18.82	■□□□□ 0.6
P4HB-223	ENST00000576390	ZBED6	P86452	979 aa		18.82	■□□□□ 0.6
P4HB-223	ENST00000576390	DSC2	Q02487	901 aa		18.82	■□□□□ 0.6
P4HB-223	ENST00000576390	ATP13A4	Q4VNC1	1196 aa		18.82	■□□□□ 0.6
P4HB-223	ENST00000576390	TMEM164	Q5U3C3	297 aa		18.82	■□□□□ 0.6
P4HB-223	ENST00000576390	TIGD7	Q6NT04	549 aa	Predicted RBP	18.82	■□□□□ 0.6
P4HB-223	ENST00000576390	NRSN1	Q8IZ57	195 aa		18.82	■□□□□ 0.6
P4HB-223	ENST00000576390	OR4D9	Q8NGE8	314 aa		18.82	■□□□□ 0.6
P4HB-223	ENST00000576390	ARRDC2	Q8TBH0	407 aa		18.82	■□□□□ 0.6
P4HB-223	ENST00000576390	TAAR9	Q96RI9	348 aa		18.82	■□□□□ 0.6
P4HB-223	ENST00000576390	LYSMD1	Q96S90	227 aa		18.82	■□□□□ 0.6
P4HB-223	ENST00000576390	WDR70	Q9NW82	654 aa		18.82	■□□□□ 0.6
P4HB-223	ENST00000576390	IFNK	Q9P0W0	207 aa		18.82	■□□□□ 0.6
P4HB-223	ENST00000576390	ITK	Q08881	620 aa		18.81	■□□□□ 0.6
P4HB-223	ENST00000576390	LRP8	Q14114	963 aa		18.81	■□□□□ 0.6
P4HB-223	ENST00000576390	IFI16	Q16666	785 aa	Known RBP	18.81	■□□□□ 0.6
P4HB-223	ENST00000576390	HADH	Q16836	314 aa	Known RBP	18.81	■□□□□ 0.6
P4HB-223	ENST00000576390	CCDC122	Q5T0U0	273 aa		18.81	■□□□□ 0.6
P4HB-223	ENST00000576390	NKAIN2	Q5VXU1	208 aa		18.81	■□□□□ 0.6
P4HB-223	ENST00000576390	ALKBH5	Q6P6C2	394 aa	Known RBP	18.81	■□□□□ 0.6
P4HB-223	ENST00000576390	TRIM74	Q86UV6	250 aa		18.81	■□□□□ 0.6
P4HB-223	ENST00000576390	CPNE8	Q86YQ8	564 aa		18.81	■□□□□ 0.6
P4HB-223	ENST00000576390	EXTL1	Q92935	676 aa		18.81	■□□□□ 0.6
P4HB-223	ENST00000576390	PMEPA1	Q969W9	287 aa		18.81	■□□□□ 0.6
P4HB-223	ENST00000576390	FAF2	Q96CS3	445 aa		18.81	■□□□□ 0.6
P4HB-223	ENST00000576390	WDR24	Q96S15	920 aa		18.81	■□□□□ 0.6
P4HB-223	ENST00000576390	DPYSL5	Q9BPU6	564 aa		18.81	■□□□□ 0.6
P4HB-223	ENST00000576390	ZNF670	Q9BS34	389 aa		18.81	■□□□□ 0.6
P4HB-223	ENST00000576390	RBM22	Q9NW64	420 aa	Known RBP eCLIP	18.81	■□□□□ 0.6	1e-7	■■■□□ 17.8
P4HB-223	ENST00000576390	PDP2	Q9P2J9	529 aa		18.81	■□□□□ 0.6
P4HB-223	ENST00000576390	DNPEP	Q9ULA0	475 aa		18.81	■□□□□ 0.6
P4HB-223	ENST00000576390	CAPN11	Q9UMQ6	739 aa		18.81	■□□□□ 0.6
P4HB-223	ENST00000576390	CHKB	Q9Y259	395 aa		18.81	■□□□□ 0.6
P4HB-223	ENST00000576390	PCDHB11	Q9Y5F2	797 aa		18.81	■□□□□ 0.6
P4HB-223	ENST00000576390	DNAJC6	O75061	913 aa		18.8	■□□□□ 0.6
P4HB-223	ENST00000576390	ITGB6	P18564	788 aa		18.8	■□□□□ 0.6
P4HB-223	ENST00000576390	RPL26	P61254	145 aa	Known RBP	18.8	■□□□□ 0.6
P4HB-223	ENST00000576390	NIPAL4	Q0D2K0	466 aa		18.8	■□□□□ 0.6
P4HB-223	ENST00000576390	ANKRD20A8P	Q5CZ79	823 aa		18.8	■□□□□ 0.6
P4HB-223	ENST00000576390	SFRP1	Q8N474	314 aa		18.8	■□□□□ 0.6
P4HB-223	ENST00000576390	EXD1	Q8NHP7	514 aa		18.8	■□□□□ 0.6
P4HB-223	ENST00000576390	ZNF564	Q8TBZ8	553 aa	Predicted RBP	18.8	■□□□□ 0.6
P4HB-223	ENST00000576390	HTR3C	Q8WXA8	447 aa		18.8	■□□□□ 0.6
P4HB-223	ENST00000576390	RIOK2	Q9BVS4	552 aa	Known RBP	18.8	■□□□□ 0.6
P4HB-223	ENST00000576390	STARD5	Q9NSY2	213 aa		18.8	■□□□□ 0.6
P4HB-223	ENST00000576390	TMEM9	Q9P0T7	183 aa		18.8	■□□□□ 0.6
P4HB-223	ENST00000576390	CNOT6	Q9ULM6	557 aa	Known RBP	18.8	■□□□□ 0.6
P4HB-223	ENST00000576390	RPL26L1	Q9UNX3	145 aa	Known RBP	18.8	■□□□□ 0.6
P4HB-223	ENST00000576390	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	18.8	■□□□□ 0.6
P4HB-223	ENST00000576390	TLN1	Q9Y490	2541 aa	Known RBP	18.8	■□□□□ 0.6
P4HB-223	ENST00000576390	STMND1	H3BQB6	276 aa		18.79	■□□□□ 0.6
P4HB-223	ENST00000576390	MAP3K6	O95382	1288 aa		18.79	■□□□□ 0.6
P4HB-223	ENST00000576390	CLDN7	O95471	211 aa		18.79	■□□□□ 0.6
P4HB-223	ENST00000576390	EML2	O95834	649 aa		18.79	■□□□□ 0.6
P4HB-223	ENST00000576390	HLA-DQB2	P05538	268 aa		18.79	■□□□□ 0.6
P4HB-223	ENST00000576390	EPHB1	P54762	984 aa		18.79	■□□□□ 0.6
P4HB-223	ENST00000576390	GPLD1	P80108	840 aa		18.79	■□□□□ 0.6
P4HB-223	ENST00000576390	BIRC2	Q13490	618 aa		18.79	■□□□□ 0.6
P4HB-223	ENST00000576390	PDK2	Q15119	407 aa		18.79	■□□□□ 0.6
P4HB-223	ENST00000576390	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	18.79	■□□□□ 0.6
P4HB-223	ENST00000576390	TMEM71	Q6P5X7	295 aa		18.79	■□□□□ 0.6
P4HB-223	ENST00000576390	GALNT13	Q8IUC8	556 aa		18.79	■□□□□ 0.6
P4HB-223	ENST00000576390	PQLC3	Q8N755	202 aa		18.79	■□□□□ 0.6
P4HB-223	ENST00000576390	AGBL5	Q8NDL9	886 aa		18.79	■□□□□ 0.6
P4HB-223	ENST00000576390	SLC37A2	Q8TED4	501 aa		18.79	■□□□□ 0.6
P4HB-223	ENST00000576390	NKD1	Q969G9	470 aa		18.79	■□□□□ 0.6
P4HB-223	ENST00000576390	IQCD	Q96DY2	449 aa		18.79	■□□□□ 0.6
P4HB-223	ENST00000576390	DDA1	Q9BW61	102 aa		18.79	■□□□□ 0.6
P4HB-223	ENST00000576390	KCNK4	Q9NYG8	393 aa		18.79	■□□□□ 0.6
P4HB-223	ENST00000576390	VPS18	Q9P253	973 aa		18.79	■□□□□ 0.6
P4HB-223	ENST00000576390	ZNF106	Q9H2Y7	1883 aa	Known RBP	18.79	■□□□□ 0.6
P4HB-223	ENST00000576390	BSN	Q9UPA5	3926 aa		18.79	■□□□□ 0.6
P4HB-223	ENST00000576390	INPP4B	O15327	924 aa		18.78	■□□□□ 0.6
P4HB-223	ENST00000576390	SLC28A2	O43868	658 aa		18.78	■□□□□ 0.6
P4HB-223	ENST00000576390	PROSC	O94903	275 aa		18.78	■□□□□ 0.6
P4HB-223	ENST00000576390	TPM3	P06753	285 aa		18.78	■□□□□ 0.6
P4HB-223	ENST00000576390	SSR1	P43307	286 aa	Known RBP	18.78	■□□□□ 0.6
P4HB-223	ENST00000576390	TAS2R40	P59535	323 aa		18.78	■□□□□ 0.6
P4HB-223	ENST00000576390	SLC10A2	Q12908	348 aa	Predicted RBP	18.78	■□□□□ 0.6
P4HB-223	ENST00000576390	NFATC3	Q12968	1075 aa		18.78	■□□□□ 0.6
P4HB-223	ENST00000576390	TBR1	Q16650	682 aa		18.78	■□□□□ 0.6
P4HB-223	ENST00000576390	HENMT1	Q5T8I9	393 aa	Known RBP	18.78	■□□□□ 0.6
P4HB-223	ENST00000576390	MARK2	Q7KZI7	788 aa	Known RBP	18.78	■□□□□ 0.6
P4HB-223	ENST00000576390	ZSCAN1	Q8NBB4	408 aa		18.78	■□□□□ 0.6
P4HB-223	ENST00000576390	CPLX3	Q8WVH0	158 aa		18.78	■□□□□ 0.6
P4HB-223	ENST00000576390	HDAC11	Q96DB2	347 aa		18.78	■□□□□ 0.6
P4HB-223	ENST00000576390	SLC12A9	Q9BXP2	914 aa		18.78	■□□□□ 0.6
P4HB-223	ENST00000576390	XPO4	Q9C0E2	1151 aa	Known RBP	18.78	■□□□□ 0.6
P4HB-223	ENST00000576390	PCDH9	Q9HC56	1237 aa		18.78	■□□□□ 0.6
P4HB-223	ENST00000576390	B3GALT1	Q9Y5Z6	326 aa		18.78	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms