RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 DERL2Q9GZP9 239 aa13.99□□□□□ -0.17
VPS33B-208ENST00000574755 ZBTB26Q9HCK0 441 aa13.99□□□□□ -0.17
VPS33B-208ENST00000574755 EVLQ9UI08 416 aaPredicted RBP13.99□□□□□ -0.17
VPS33B-208ENST00000574755 CLEC4EQ9ULY5 219 aa13.99□□□□□ -0.17
VPS33B-208ENST00000574755 LCHNA4D1U4 455 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 H7C0S8 307 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 TBX10O75333 385 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 VPS26AO75436 327 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 PDE5AO76074 875 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 PGLSO95336 258 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 SIX3O95343 332 aaPredicted RBP13.98□□□□□ -0.17
VPS33B-208ENST00000574755 PRAMEF12O95522 483 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 PKMP14618 531 aaKnown RBP13.98□□□□□ -0.17
VPS33B-208ENST00000574755 CDH13P55290 713 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 TBL3Q12788 808 aaKnown RBP13.98□□□□□ -0.17
VPS33B-208ENST00000574755 LMAN2Q12907 356 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 SETMARQ53H47 684 aaPredicted RBP13.98□□□□□ -0.17
VPS33B-208ENST00000574755 UNC50Q53HI1 259 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 AARS2Q5JTZ9 985 aaKnown RBP13.98□□□□□ -0.17
VPS33B-208ENST00000574755 CLEC6AQ6EIG7 209 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 LILRA6Q6PI73 481 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 TAS2R42Q7RTR8 314 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 LYSMD3Q7Z3D4 306 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 SHKBP1Q8TBC3 707 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 STAG3L4Q8TBR4 150 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 KIAA1191Q96A73 305 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 CCDC124Q96CT7 223 aaKnown RBP13.98□□□□□ -0.17
VPS33B-208ENST00000574755 SMG9Q9H0W8 520 aaKnown RBP13.98□□□□□ -0.17
VPS33B-208ENST00000574755 MEAF6Q9HAF1 191 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 MAGEE1Q9HCI5 957 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 ASAH2Q9NR71 780 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 IL17CQ9P0M4 197 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 KIAA1522Q9P206 1035 aaPredicted RBP13.98□□□□□ -0.17
VPS33B-208ENST00000574755 STX18Q9P2W9 335 aaKnown RBP13.98□□□□□ -0.17
VPS33B-208ENST00000574755 RNF112Q9ULX5 631 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 TRAF6Q9Y4K3 522 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 COPG1Q9Y678 874 aaKnown RBP13.98□□□□□ -0.17
VPS33B-208ENST00000574755 SUPT3HB4E1H0 165 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 LEFTY2O00292 366 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 NRG2O14511 850 aaPredicted RBP13.98□□□□□ -0.17
VPS33B-208ENST00000574755 GPR39O43194 453 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 KERAO60938 352 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 NIPSNAP2O75323 286 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 SUPT3HO75486 399 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 LINC00271P0C7V0 271 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 MTHFD2P13995 350 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 HMGCLP35914 325 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 SLC34A1Q06495 639 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 BCL2L1Q07817 233 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 MPP7Q5T2T1 576 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 KIRREL3Q8IZU9 778 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 GALPQ9UBC7 116 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 OAS3Q9Y6K5 1087 aaKnown RBP13.98□□□□□ -0.17
VPS33B-208ENST00000574755 SLC30A1Q9Y6M5 507 aa13.98□□□□□ -0.17
VPS33B-208ENST00000574755 CCDC189A1A4V9 331 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 E5RI56 91 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 CCL16O15467 120 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 CCNT2O60583 730 aaKnown RBP13.97□□□□□ -0.17
VPS33B-208ENST00000574755 CHRM3P20309 590 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 CD70P32970 193 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 ATP6V0D1P61421 351 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 TSNQ15631 228 aaKnown RBP13.97□□□□□ -0.17
VPS33B-208ENST00000574755 GEN1Q17RS7 908 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 EML3Q32P44 896 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 NKAPQ8N5F7 415 aaKnown RBP13.97□□□□□ -0.17
VPS33B-208ENST00000574755 SLC22A17Q8WUG5 538 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 PIH1D2Q8WWB5 315 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 EID2BQ96D98 161 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 RSRC1Q96IZ7 334 aaKnown RBP13.97□□□□□ -0.17
VPS33B-208ENST00000574755 TCF25Q9BQ70 676 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 SLC46A2Q9BY10 475 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 IL23AQ9NPF7 189 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 MCM8Q9UJA3 840 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 TRMT6Q9UJA5 497 aaKnown RBP13.97□□□□□ -0.17
VPS33B-208ENST00000574755 DOCK6Q96HP0 2047 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.97□□□□□ -0.17
VPS33B-208ENST00000574755 SORBS2O94875 1100 aaKnown RBP13.97□□□□□ -0.17
VPS33B-208ENST00000574755 CYBBP04839 570 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 GKP32189 559 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 CLCN4P51793 760 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 PLEKHG6Q3KR16 790 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 CTSL3PQ5NE16 218 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 PGM2L1Q6PCE3 622 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 NECAB2Q7Z6G3 386 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 PELI3Q8N2H9 469 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 KYQ8NBH2 561 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 SIDT2Q8NBJ9 832 aaKnown RBP13.97□□□□□ -0.17
VPS33B-208ENST00000574755 FIBINQ8TAL6 211 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 ASB2Q96Q27 587 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 SLC30A3Q99726 388 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 TNKS2Q9H2K2 1166 aa13.97□□□□□ -0.17
VPS33B-208ENST00000574755 LRRC14BA6NHZ5 514 aa13.96□□□□□ -0.17
VPS33B-208ENST00000574755 BTN3A1O00481 513 aa13.96□□□□□ -0.17
VPS33B-208ENST00000574755 GLUD1P00367 558 aa13.96□□□□□ -0.17
VPS33B-208ENST00000574755 HELZP42694 1942 aaKnown RBP13.96□□□□□ -0.17
VPS33B-208ENST00000574755 PTGER3P43115 390 aa13.96□□□□□ -0.17
VPS33B-208ENST00000574755 MAPK8P45983 427 aa13.96□□□□□ -0.17
VPS33B-208ENST00000574755 AP2B1P63010 937 aa13.96□□□□□ -0.17
VPS33B-208ENST00000574755 SH3BP2P78314 561 aa13.96□□□□□ -0.17
VPS33B-208ENST00000574755 HTRA4P83105 476 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms