RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 ZNF641Q96N77 438 aaPredicted RBP10.08□□□□□ -0.8
SMG6-213ENST00000573166 OSBPL6Q9BZF3 934 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 MTG2Q9H4K7 406 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 UBE2ZQ9H832 354 aaPredicted RBP10.08□□□□□ -0.8
SMG6-213ENST00000573166 MTMR10Q9NXD2 777 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 GULP1Q9UBP9 304 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 ARL2BPQ9Y2Y0 163 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 TTC3P53804 2025 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 SCN10AQ9Y5Y9 1956 aa10.08□□□□□ -0.8
SMG6-213ENST00000573166 ZW10O43264 779 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 IDSP22304 550 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 DHPSP49366 369 aaPredicted RBP10.07□□□□□ -0.8
SMG6-213ENST00000573166 TPD52P55327 224 aaPredicted RBP10.07□□□□□ -0.8
SMG6-213ENST00000573166 RPL26P61254 145 aaKnown RBP10.07□□□□□ -0.8
SMG6-213ENST00000573166 ZNF805Q5CZA5 627 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 ZDHHC24Q6UX98 284 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 ZCCHC23Q6ZST2 131 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 CHST15Q7LFX5 561 aaPredicted RBP10.07□□□□□ -0.8
SMG6-213ENST00000573166 ACMSDQ8TDX5 336 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 IMP4Q96G21 291 aaKnown RBP10.07□□□□□ -0.8
SMG6-213ENST00000573166 AGAP2Q99490 1192 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 GPR21Q99679 349 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 KDM4CQ9H3R0 1056 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 NENFQ9UMX5 172 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 RPL26L1Q9UNX3 145 aaKnown RBP10.07□□□□□ -0.8
SMG6-213ENST00000573166 A0A1W2PP55 124 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 TRPC5OSA6NMA1 111 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 LILRB3O75022 631 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 KRT6AP02538 564 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 KRT6BP04259 564 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 KRT6CP48668 564 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 ERFP50548 548 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 PRR23BQ6ZRT6 265 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 Q6ZVL8 140 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 ERN2Q76MJ5 926 aaKnown RBP10.07□□□□□ -0.8
SMG6-213ENST00000573166 CFAP206Q8IYR0 622 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 ATL1Q8WXF7 558 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 ACE2Q9BYF1 805 aaPredicted RBP10.07□□□□□ -0.8
SMG6-213ENST00000573166 OR2AG1Q9H205 316 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 POMKQ9H5K3 350 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 WDR26Q9H7D7 661 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 HEBP1Q9NRV9 189 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 KCTD3Q9Y597 815 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 STON1Q9Y6Q2 735 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 TET1Q8NFU7 2136 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 TCRBV21S2A2A0A5A6 115 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 DRGXA6NNA5 263 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 SERPINE1P05121 402 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 SRPRAP08240 638 aaKnown RBP10.07□□□□□ -0.8
SMG6-213ENST00000573166 DDX5P17844 614 aaKnown RBP10.07□□□□□ -0.8
SMG6-213ENST00000573166 NSG1P42857 185 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 PTGER3P43115 390 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 TAF8Q7Z7C8 310 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 LRRC34Q8IZ02 419 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 KIF2BQ8N4N8 673 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 PTGR2Q8N8N7 351 aaPredicted RBP10.07□□□□□ -0.8
SMG6-213ENST00000573166 METTL6Q8TCB7 284 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 LRIG1Q96JA1 1093 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 SEC16BQ96JE7 1060 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 TUBGCP5Q96RT8 1024 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 IL12RB2Q99665 862 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 COPS7BQ9H9Q2 264 aaPredicted RBP10.07□□□□□ -0.8
SMG6-213ENST00000573166 MID1IP1Q9NPA3 183 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 MTO1Q9Y2Z2 717 aaKnown RBP10.07□□□□□ -0.8
SMG6-213ENST00000573166 ACTL7AQ9Y615 435 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 USH1CQ9Y6N9 552 aa10.07□□□□□ -0.8
SMG6-213ENST00000573166 A0A1W2PPM1 405 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 ZNF839A8K0R7 811 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 MTX2O75431 263 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 PGLSO95336 258 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 ADH1BP00325 375 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 SRCP12931 536 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 ZNF30P17039 623 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 PGFP49763 221 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 ATP6V0D1P61421 351 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 IRF8Q02556 426 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 CHRNA6Q15825 494 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 DBN1Q16643 649 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 GALNTL6Q49A17 601 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 GPR33Q49SQ1 333 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 SEL1L3Q68CR1 1132 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 SNX20Q7Z614 316 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 MILR1Q7Z6M3 343 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 IQCKQ8N0W5 287 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 OR56A4Q8NGH8 313 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 KCNV2Q8TDN2 545 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 FAR2Q96K12 515 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 DPEP2Q9H4A9 486 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 ACTR5Q9H9F9 607 aaPredicted RBP10.06□□□□□ -0.8
SMG6-213ENST00000573166 SLC40A1Q9NP59 571 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 XPR1Q9UBH6 696 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 L3MBTL1Q9Y468 752 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 TNPO3Q9Y5L0 923 aaKnown RBP10.06□□□□□ -0.8
SMG6-213ENST00000573166 PTPRFP10586 1907 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 SIN3BO75182 1162 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 PAK4O96013 591 aaPredicted RBP10.06□□□□□ -0.8
SMG6-213ENST00000573166 GSRP00390 522 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 IL4RP24394 825 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 GJA4P35212 333 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 RPA3P35244 121 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms