RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 NDFIP2Q9NV92 336 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 RIC8BQ9NVN3 520 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 ZNF510Q9Y2H8 683 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 PAPPA2Q9BXP8 1791 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 SYCE1LA8MT33 242 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 PDHXO00330 501 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 MTHFD1P11586 935 aaKnown RBP10.72□□□□□ -0.69
CCDC40-207ENST00000572253 TPP2P29144 1249 aaPredicted RBP10.72□□□□□ -0.69
CCDC40-207ENST00000572253 CLCQ05315 142 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 GRIK2Q13002 908 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 TIGD5Q53EQ6 642 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 AFMIDQ63HM1 303 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 GPR142Q7Z601 462 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 SPATA2LQ8IUW3 424 aaPredicted RBP10.72□□□□□ -0.69
CCDC40-207ENST00000572253 SFRP1Q8N474 314 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 PDZD8Q8NEN9 1154 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 SCAMP5Q8TAC9 235 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 ZC3H15Q8WU90 426 aaKnown RBP10.72□□□□□ -0.69
CCDC40-207ENST00000572253 TMEM125Q96AQ2 219 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 NSMCE2Q96MF7 247 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 KATNAL1Q9BW62 490 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 AGO3Q9H9G7 860 aaKnown RBP10.72□□□□□ -0.69
CCDC40-207ENST00000572253 FAM105AQ9NUU6 356 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 MARCH4Q9P2E8 410 aaPredicted RBP10.72□□□□□ -0.69
CCDC40-207ENST00000572253 UXTQ9UBK9 157 aaPredicted RBP10.72□□□□□ -0.69
CCDC40-207ENST00000572253 PTGDR2Q9Y5Y4 395 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 OTOFQ9HC10 1997 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 A0A1W2PPW3 197 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 OR51F1A6NGY5 319 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 RHOBTB1O94844 696 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 ATE1O95260 518 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 CHRM3P20309 590 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 EEF1DP29692 281 aaKnown RBP10.72□□□□□ -0.69
CCDC40-207ENST00000572253 GRIK1P39086 918 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 SCNN1GP51170 649 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 ARSDP51689 593 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 TMEM26Q6ZUK4 368 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 TFAP2DQ7Z6R9 452 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 TLK2Q86UE8 772 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 BLOC1S5Q8TDH9 187 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 CASP10Q92851 521 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 TBATAQ96M53 351 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 KLHL5Q96PQ7 755 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 SEPHS2Q99611 448 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 NUSAP1Q9BXS6 441 aaKnown RBP10.72□□□□□ -0.69
CCDC40-207ENST00000572253 ATP13A1Q9HD20 1204 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 SEMA4BQ9NPR2 832 aaPredicted RBP10.72□□□□□ -0.69
CCDC40-207ENST00000572253 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.72□□□□□ -0.69
CCDC40-207ENST00000572253 PCDHA9Q9Y5H5 950 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 HS3ST4Q9Y661 456 aa10.72□□□□□ -0.69
CCDC40-207ENST00000572253 TRIM64A6NGJ6 449 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 MROH6A6NGR9 719 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 H0YAE9 185 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 DLGAP1O14490 977 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 DEAF1O75398 565 aaPredicted RBP10.71□□□□□ -0.69
CCDC40-207ENST00000572253 SOAT2O75908 522 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 B3GAT3O94766 335 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 CLIC3O95833 236 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 CYBBP04839 570 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 CCNA2P20248 432 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 HLCSP50747 726 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 RAD51Q06609 339 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 SIRPB2Q5JXA9 342 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 PLEKHH3Q7Z736 793 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 AP5M1Q9H0R1 490 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 CATSPERZQ9NTU4 200 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 SEPT3Q9UH03 358 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 TDRKHQ9Y2W6 561 aaKnown RBP10.71□□□□□ -0.69
CCDC40-207ENST00000572253 UBA6A0AVT1 1052 aaPredicted RBP10.71□□□□□ -0.69
CCDC40-207ENST00000572253 C16orf96A6NNT2 1141 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 WASH4PA8MWX3 477 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 SLC22A3O75751 556 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 BCL10O95999 233 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 ZNF37AP17032 561 aaPredicted RBP10.71□□□□□ -0.69
CCDC40-207ENST00000572253 RHOQP17081 205 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 CPT1AP50416 773 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 MLLT6P55198 1093 aaPredicted RBP10.71□□□□□ -0.69
CCDC40-207ENST00000572253 NRG1Q02297 640 aaPredicted RBP10.71□□□□□ -0.69
CCDC40-207ENST00000572253 AARS2Q5JTZ9 985 aaKnown RBP10.71□□□□□ -0.69
CCDC40-207ENST00000572253 BROXQ5VW32 411 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 OGFOD2Q6N063 350 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 DUS1LQ6P1R4 473 aaKnown RBP10.71□□□□□ -0.69
CCDC40-207ENST00000572253 FAM171BQ6P995 826 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 C14orf80Q86SX3 495 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 SPNS2Q8IVW8 549 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 UMODL1-AS1Q8N2C9 162 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 HMCESQ96FZ2 354 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 MAGED4Q96JG8 741 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 RNF145Q96MT1 663 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 KCNA7Q96RP8 456 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 C1orf50Q9BV19 199 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 PAIP2BQ9ULR5 123 aaKnown RBP10.71□□□□□ -0.69
CCDC40-207ENST00000572253 GIT1Q9Y2X7 761 aa10.71□□□□□ -0.69
CCDC40-207ENST00000572253 ZNF236Q9UL36 1845 aa10.71□□□□□ -0.7
CCDC40-207ENST00000572253 KERAO60938 352 aa10.71□□□□□ -0.7
CCDC40-207ENST00000572253 RPP40O75818 363 aaKnown RBP10.71□□□□□ -0.7
CCDC40-207ENST00000572253 WISP3O95389 354 aaPredicted RBP10.71□□□□□ -0.7
CCDC40-207ENST00000572253 GOT2P00505 430 aaKnown RBP10.71□□□□□ -0.7
CCDC40-207ENST00000572253 OCM2P0CE71 109 aa10.71□□□□□ -0.7
CCDC40-207ENST00000572253 OCMP0CE72 109 aaPredicted RBP10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms