RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 PPARDQ03181 441 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 NSUN2Q08J23 767 aaKnown RBP eCLIP4.84□□□□□ -1.63
CNOT1-219ENST00000569882 SLC10A7Q0GE19 358 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 FOXD4Q12950 439 aaPredicted RBP4.84□□□□□ -1.63
CNOT1-219ENST00000569882 LLGL1Q15334 1064 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 CYTH1Q15438 398 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 TCEA2Q15560 299 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 UGP2Q16851 508 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 MSMPQ1L6U9 139 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 ZNF284Q2VY69 593 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 ZNF542PQ5EBM4 170 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 TFDP3Q5H9I0 405 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 NCBP2-AS2Q69YL0 99 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 TXNRD3NBQ6F5E7 133 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 RAET1GQ6H3X3 334 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 KYAT3Q6YP21 454 aaKnown RBP4.84□□□□□ -1.63
CNOT1-219ENST00000569882 ARHGAP36Q6ZRI8 547 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 PEX26Q7Z412 305 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 PARGQ86W56 976 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 CCDC13Q8IYE1 715 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 SYCE1Q8N0S2 351 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 GALNT15Q8N3T1 639 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 ARFGAP1Q8N6T3 406 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 PNPLA1Q8N8W4 532 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 TC2NQ8N9U0 490 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 DENND6BQ8NEG7 585 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 LPCAT1Q8NF37 534 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 KIAA1524Q8TCG1 905 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 CCHCR1Q8TD31 782 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 LMX1AQ8TE12 382 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 HAUS1Q96CS2 278 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 TRIM44Q96DX7 344 aaPredicted RBP4.84□□□□□ -1.63
CNOT1-219ENST00000569882 NUS1Q96E22 293 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 CNDP2Q96KP4 475 aaKnown RBP4.84□□□□□ -1.63
CNOT1-219ENST00000569882 ALS2CR12Q96Q35 445 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 PSKH2Q96QS6 385 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 NUDCD1Q96RS6 583 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 DUSP23Q9BVJ7 150 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 FSD1LQ9BXM9 530 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 ADGRE3Q9BY15 652 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 RBCK1Q9BYM8 510 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 TSGA10Q9BZW7 698 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 CCDC86Q9H6F5 360 aaKnown RBP4.84□□□□□ -1.63
CNOT1-219ENST00000569882 ACSS3Q9H6R3 686 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 NOL6Q9H6R4 1146 aaKnown RBP4.84□□□□□ -1.63
CNOT1-219ENST00000569882 PDFQ9HBH1 243 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 RBM22Q9NW64 420 aaKnown RBP eCLIP4.84□□□□□ -1.636e-9■■■■■ 40.5
CNOT1-219ENST00000569882 KLHL8Q9P2G9 620 aaPredicted RBP4.84□□□□□ -1.63
CNOT1-219ENST00000569882 IMPACTQ9P2X3 320 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 SPASTQ9UBP0 616 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 DKK3Q9UBP4 350 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 KLQ9UEF7 1012 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 APOBEC3BQ9UH17 382 aaKnown RBP4.84□□□□□ -1.63
CNOT1-219ENST00000569882 GGT7Q9UJ14 662 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 PCOLCE2Q9UKZ9 415 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 DNPEPQ9ULA0 475 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 NEU3Q9UQ49 428 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 COQ6Q9Y2Z9 468 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 MFHAS1Q9Y4C4 1052 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 HYOU1Q9Y4L1 999 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 PCDHGB2Q9Y5G2 931 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 EPN1Q9Y6I3 576 aaPredicted RBP4.84□□□□□ -1.63
CNOT1-219ENST00000569882 MYO15AQ9UKN7 3530 aa4.84□□□□□ -1.63
CNOT1-219ENST00000569882 CPED1A4D0V7 1026 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 POM121BA6NF01 834 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 KCNK1O00180 336 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 TOR1BO14657 336 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 ENC1O14682 589 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 MATN3O15232 486 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 MTSS1O43312 755 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 KRT86O43790 486 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 RRP9O43818 475 aaKnown RBP4.83□□□□□ -1.64
CNOT1-219ENST00000569882 BUB1BO60566 1050 aaPredicted RBP4.83□□□□□ -1.64
CNOT1-219ENST00000569882 MAFKO60675 156 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 CST8O60676 142 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 ZNF821O75541 412 aaPredicted RBP4.83□□□□□ -1.64
CNOT1-219ENST00000569882 RFPL3O75679 317 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 RASGRP1O95267 797 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 ASMTLO95671 621 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 CD160O95971 181 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 JCHAINP01591 159 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 WNT1P04628 370 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 ALPIP09923 528 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 CD59P13987 128 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 JUPP14923 745 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 CTPS1P17812 591 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 CCNCP24863 283 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 EPHA8P29322 1005 aaPredicted RBP4.83□□□□□ -1.64
CNOT1-219ENST00000569882 VIPR1P32241 457 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 ACTN2P35609 894 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 CD86P42081 329 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 DSC2Q02487 901 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 GBE1Q04446 702 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 GALNT2Q10471 571 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 TBX2Q13207 712 aaPredicted RBP4.83□□□□□ -1.64
CNOT1-219ENST00000569882 PRPSAP1Q14558 356 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 PAFAH1B3Q15102 231 aaKnown RBP4.83□□□□□ -1.64
CNOT1-219ENST00000569882 IRF4Q15306 451 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 ELOCQ15369 112 aa4.83□□□□□ -1.64
CNOT1-219ENST00000569882 ATP13A4Q4VNC1 1196 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms