RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 RPL26P61254 145 aaKnown RBP14.44□□□□□ -0.1
COMMD4-225ENST00000569245 IHHQ14623 411 aa14.44□□□□□ -0.1
COMMD4-225ENST00000569245 NR0B2Q15466 257 aa14.44□□□□□ -0.1
COMMD4-225ENST00000569245 CDKN3Q16667 212 aa14.44□□□□□ -0.1
COMMD4-225ENST00000569245 RAET1GQ6H3X3 334 aa14.44□□□□□ -0.1
COMMD4-225ENST00000569245 KDELC2Q7Z4H8 507 aa14.44□□□□□ -0.1
COMMD4-225ENST00000569245 GKN2Q86XP6 184 aa14.44□□□□□ -0.1
COMMD4-225ENST00000569245 JAMLQ86YT9 394 aa14.44□□□□□ -0.1
COMMD4-225ENST00000569245 CNTD1Q8N815 330 aa14.44□□□□□ -0.1
COMMD4-225ENST00000569245 KDF1Q8NAX2 398 aaPredicted RBP14.44□□□□□ -0.1
COMMD4-225ENST00000569245 TBATAQ96M53 351 aa14.44□□□□□ -0.1
COMMD4-225ENST00000569245 RBM15Q96T37 977 aaKnown RBP eCLIP14.44□□□□□ -0.1
COMMD4-225ENST00000569245 LGR4Q9BXB1 951 aa14.44□□□□□ -0.1
COMMD4-225ENST00000569245 ADGRE3Q9BY15 652 aa14.44□□□□□ -0.1
COMMD4-225ENST00000569245 CLPBQ9H078 707 aa14.44□□□□□ -0.1
COMMD4-225ENST00000569245 SUDS3Q9H7L9 328 aaPredicted RBP14.44□□□□□ -0.1
COMMD4-225ENST00000569245 PHPT1Q9NRX4 125 aaPredicted RBP14.44□□□□□ -0.1
COMMD4-225ENST00000569245 GULP1Q9UBP9 304 aa14.44□□□□□ -0.1
COMMD4-225ENST00000569245 CD84Q9UIB8 345 aa14.44□□□□□ -0.1
COMMD4-225ENST00000569245 ZMIZ1Q9ULJ6 1067 aa14.44□□□□□ -0.1
COMMD4-225ENST00000569245 RPL26L1Q9UNX3 145 aaKnown RBP14.44□□□□□ -0.1
COMMD4-225ENST00000569245 COL5A1P20908 1838 aaPredicted RBP14.43□□□□□ -0.1
COMMD4-225ENST00000569245 FREM2Q5SZK8 3169 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 TRABD2BA6NFA1 517 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 CAPN8A6NHC0 703 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 BHMG1C9JSJ3 638 aaPredicted RBP14.43□□□□□ -0.1
COMMD4-225ENST00000569245 MTSS1O43312 755 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 CELA2BP08218 269 aaPredicted RBP14.43□□□□□ -0.1
COMMD4-225ENST00000569245 MMP2P08253 660 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 HOXC4P09017 264 aaPredicted RBP14.43□□□□□ -0.1
COMMD4-225ENST00000569245 RBL1P28749 1068 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 GPR1P46091 355 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 TERF1P54274 439 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 SKOR1P84550 965 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 INSM1Q01101 510 aaPredicted RBP14.43□□□□□ -0.1
COMMD4-225ENST00000569245 PTSQ03393 145 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 TARDBPQ13148 414 aaKnown RBP eCLIP14.43□□□□□ -0.1
COMMD4-225ENST00000569245 PTK6Q13882 451 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 PCSK7Q16549 785 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 ERCC6LQ2NKX8 1250 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 GSTA5Q7RTV2 222 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 EFL1Q7Z2Z2 1120 aaKnown RBP14.43□□□□□ -0.1
COMMD4-225ENST00000569245 HEATR4Q86WZ0 1026 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 PELI3Q8N2H9 469 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 CBARPQ8N350 705 aaPredicted RBP14.43□□□□□ -0.1
COMMD4-225ENST00000569245 IFI44Q8TCB0 444 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 CCHCR1Q8TD31 782 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 HTR3CQ8WXA8 447 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 OR1E3Q8WZA6 343 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 AP2M1Q96CW1 435 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 PDXPQ96GD0 296 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 FERMT1Q9BQL6 677 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 MLPHQ9BV36 600 aaPredicted RBP14.43□□□□□ -0.1
COMMD4-225ENST00000569245 CCDC86Q9H6F5 360 aaKnown RBP14.43□□□□□ -0.1
COMMD4-225ENST00000569245 C10orf88Q9H8K7 445 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 CYP4F12Q9HCS2 524 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 FGF22Q9HCT0 170 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 MRPL40Q9NQ50 206 aaKnown RBP14.43□□□□□ -0.1
COMMD4-225ENST00000569245 SIRPGQ9P1W8 387 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 DMGDHQ9UI17 866 aaKnown RBP14.43□□□□□ -0.1
COMMD4-225ENST00000569245 DGKBQ9Y6T7 804 aa14.43□□□□□ -0.1
COMMD4-225ENST00000569245 MAP1BP46821 2468 aaKnown RBP14.43□□□□□ -0.1
COMMD4-225ENST00000569245 C1orf232A0A0U1RR37 186 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 C5orf60A6NFR6 353 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 ANKRD66B4E2M5 251 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 TNFRSF10CO14798 259 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 KCNN4O15554 427 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 CLDN7O95471 211 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 PRLP01236 227 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 KRT14P02533 472 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 GP1BAP07359 652 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 RHOXF2BP0C7M4 288 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 MYCLP1P12525 358 aaPredicted RBP14.42□□□□□ -0.1
COMMD4-225ENST00000569245 ZNF30P17039 623 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 GDF10P55107 478 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 MRPS25P82663 173 aaKnown RBP14.42□□□□□ -0.1
COMMD4-225ENST00000569245 GALNT3Q14435 633 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 PPP1R7Q15435 360 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 QPCTQ16769 361 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 P3H1Q32P28 736 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 TEX44Q53QW1 395 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 C6orf132Q5T0Z8 1188 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 GUSBP11Q6P575 273 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 LVRNQ6Q4G3 990 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 RFLNAQ6ZTI6 216 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 TECPR1Q7Z6L1 1165 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 TAF8Q7Z7C8 310 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 PDCD7Q8N8D1 485 aaKnown RBP14.42□□□□□ -0.1
COMMD4-225ENST00000569245 CCDC89Q8N998 374 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 FAM71DQ8N9W8 422 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 MAPK15Q8TD08 544 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 SEC14L1Q92503 715 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 IMP4Q96G21 291 aaKnown RBP14.42□□□□□ -0.1
COMMD4-225ENST00000569245 RHOXF2Q9BQY4 288 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 ERP44Q9BS26 406 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 BOCQ9BWV1 1114 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 RAB17Q9H0T7 212 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 SLC25A51Q9H1U9 297 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 ABCG8Q9H221 673 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 ANKZF1Q9H8Y5 726 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms