RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 MMRN1Q13201 1228 aa13.58□□□□□ -0.24
CNOT1-215ENST00000569020 SQSTM1Q13501 440 aa13.58□□□□□ -0.24
CNOT1-215ENST00000569020 LRP8Q14114 963 aa13.58□□□□□ -0.24
CNOT1-215ENST00000569020 PAFAH1B3Q15102 231 aaKnown RBP13.58□□□□□ -0.24
CNOT1-215ENST00000569020 IFI16Q16666 785 aaKnown RBP13.58□□□□□ -0.24
CNOT1-215ENST00000569020 NKAIN2Q5VXU1 208 aa13.58□□□□□ -0.24
CNOT1-215ENST00000569020 NCBP2-AS2Q69YL0 99 aa13.58□□□□□ -0.24
CNOT1-215ENST00000569020 ALG1LQ6GMV1 187 aa13.58□□□□□ -0.24
CNOT1-215ENST00000569020 TMEM71Q6P5X7 295 aa13.58□□□□□ -0.24
CNOT1-215ENST00000569020 RFLNAQ6ZTI6 216 aa13.58□□□□□ -0.24
CNOT1-215ENST00000569020 MARK2Q7KZI7 788 aaKnown RBP13.58□□□□□ -0.24
CNOT1-215ENST00000569020 TRIM74Q86UV6 250 aa13.58□□□□□ -0.24
CNOT1-215ENST00000569020 GALNT13Q8IUC8 556 aa13.58□□□□□ -0.24
CNOT1-215ENST00000569020 RAVER1Q8IY67 606 aaKnown RBP13.58□□□□□ -0.24
CNOT1-215ENST00000569020 NRSN1Q8IZ57 195 aa13.58□□□□□ -0.24
CNOT1-215ENST00000569020 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.58□□□□□ -0.24
CNOT1-215ENST00000569020 AGBL5Q8NDL9 886 aa13.58□□□□□ -0.24
CNOT1-215ENST00000569020 FAM71BQ8TC56 605 aa13.58□□□□□ -0.24
CNOT1-215ENST00000569020 AHCYL2Q96HN2 611 aaKnown RBP13.58□□□□□ -0.24
CNOT1-215ENST00000569020 SLC38A3Q99624 504 aa13.58□□□□□ -0.24
CNOT1-215ENST00000569020 TDRD1Q9BXT4 1180 aaKnown RBP13.58□□□□□ -0.24
CNOT1-215ENST00000569020 RBM22Q9NW64 420 aaKnown RBP eCLIP13.58□□□□□ -0.24
CNOT1-215ENST00000569020 CHKBQ9Y259 395 aa13.58□□□□□ -0.24
CNOT1-215ENST00000569020 PLEKHM1Q9Y4G2 1056 aa13.58□□□□□ -0.24
CNOT1-215ENST00000569020 PCDHGA3Q9Y5H0 932 aa13.58□□□□□ -0.24
CNOT1-215ENST00000569020 KALRNO60229 2985 aa13.58□□□□□ -0.24
CNOT1-215ENST00000569020 A0A087X0T9 212 aa13.57□□□□□ -0.24
CNOT1-215ENST00000569020 INPP4BO15327 924 aa13.57□□□□□ -0.24
CNOT1-215ENST00000569020 FAM228BP0C875 321 aa13.57□□□□□ -0.24
CNOT1-215ENST00000569020 THRAP10827 490 aa13.57□□□□□ -0.24
CNOT1-215ENST00000569020 FGF3P11487 239 aaPredicted RBP13.57□□□□□ -0.24
CNOT1-215ENST00000569020 GJC1P36383 396 aa13.57□□□□□ -0.24
CNOT1-215ENST00000569020 FASLGP48023 281 aa13.57□□□□□ -0.24
CNOT1-215ENST00000569020 DPYSL3Q14195 570 aa13.57□□□□□ -0.24
CNOT1-215ENST00000569020 IQCB1Q15051 598 aa13.57□□□□□ -0.24
CNOT1-215ENST00000569020 PDK2Q15119 407 aa13.57□□□□□ -0.24
CNOT1-215ENST00000569020 ANKRD20A8PQ5CZ79 823 aa13.57□□□□□ -0.24
CNOT1-215ENST00000569020 ALKBH5Q6P6C2 394 aaKnown RBP13.57□□□□□ -0.24
CNOT1-215ENST00000569020 MAP7D3Q8IWC1 876 aa13.57□□□□□ -0.24
CNOT1-215ENST00000569020 IL22RA1Q8N6P7 574 aa13.57□□□□□ -0.24
CNOT1-215ENST00000569020 KCTD6Q8NC69 237 aa13.57□□□□□ -0.24
CNOT1-215ENST00000569020 OR10G6Q8NH81 332 aa13.57□□□□□ -0.24
CNOT1-215ENST00000569020 ZNF564Q8TBZ8 553 aaPredicted RBP13.57□□□□□ -0.24
CNOT1-215ENST00000569020 CPLX3Q8WVH0 158 aa13.57□□□□□ -0.24
CNOT1-215ENST00000569020 JPH3Q8WXH2 748 aaPredicted RBP13.57□□□□□ -0.24
CNOT1-215ENST00000569020 MAML1Q92585 1016 aa13.57□□□□□ -0.24
CNOT1-215ENST00000569020 FATE1Q969F0 183 aa13.57□□□□□ -0.24
CNOT1-215ENST00000569020 IQCDQ96DY2 449 aa13.57□□□□□ -0.24
CNOT1-215ENST00000569020 SMIM14Q96QK8 99 aa13.57□□□□□ -0.24
CNOT1-215ENST00000569020 AGAP2Q99490 1192 aa13.57□□□□□ -0.24
CNOT1-215ENST00000569020 ZNF670Q9BS34 389 aa13.57□□□□□ -0.24
CNOT1-215ENST00000569020 FUCA2Q9BTY2 467 aa13.57□□□□□ -0.24
CNOT1-215ENST00000569020 RIOK2Q9BVS4 552 aaKnown RBP13.57□□□□□ -0.24
CNOT1-215ENST00000569020 STN1Q9H668 368 aaKnown RBP13.57□□□□□ -0.24
CNOT1-215ENST00000569020 CLMPQ9H6B4 373 aa13.57□□□□□ -0.24
CNOT1-215ENST00000569020 ZNHIT2Q9UHR6 403 aa13.57□□□□□ -0.24
CNOT1-215ENST00000569020 HELZ2Q9BYK8 2649 aaKnown RBP13.57□□□□□ -0.24
CNOT1-215ENST00000569020 TRBV23OR9-2A0A075B6M9 112 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 PYCARD-AS1I3L0S3 204 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 DUX1O43812 170 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 MAP3K6O95382 1288 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 CLDN7O95471 211 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 MPSTP25325 297 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 CSF2RBP32927 897 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 ARSEP51690 589 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 STC1P52823 247 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 UBASH3AP57075 661 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 RPL26P61254 145 aaKnown RBP13.56□□□□□ -0.24
CNOT1-215ENST00000569020 ZBED6P86452 979 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 FANCCQ00597 558 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 KCNC4Q03721 635 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 TBR1Q16650 682 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 ATP13A4Q4VNC1 1196 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 CHST15Q7LFX5 561 aaPredicted RBP13.56□□□□□ -0.24
CNOT1-215ENST00000569020 FAM129CQ86XR2 697 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 SFRP1Q8N474 314 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 LPCAT1Q8NF37 534 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 ART4Q93070 314 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 NKD1Q969G9 470 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 COX14Q96I36 57 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 TSGA13Q96PP4 275 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 DDA1Q9BW61 102 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 ASPSCR1Q9BZE9 553 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 PCDH9Q9HC56 1237 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 STARD5Q9NSY2 213 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 SLC39A1Q9NY26 324 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 PKD2L2Q9NZM6 624 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 VPS18Q9P253 973 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 CAPN11Q9UMQ6 739 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 RPL26L1Q9UNX3 145 aaKnown RBP13.56□□□□□ -0.24
CNOT1-215ENST00000569020 B3GALT1Q9Y5Z6 326 aa13.56□□□□□ -0.24
CNOT1-215ENST00000569020 C1orf232A0A0U1RR37 186 aa13.55□□□□□ -0.24
CNOT1-215ENST00000569020 EFCAB7A8K855 629 aa13.55□□□□□ -0.24
CNOT1-215ENST00000569020 DNAJC6O75061 913 aa13.55□□□□□ -0.24
CNOT1-215ENST00000569020 WISP1O95388 367 aa13.55□□□□□ -0.24
CNOT1-215ENST00000569020 ATP1A1P05023 1023 aaKnown RBP13.55□□□□□ -0.24
CNOT1-215ENST00000569020 HLA-DQB2P05538 268 aa13.55□□□□□ -0.24
CNOT1-215ENST00000569020 KRT7P08729 469 aa13.55□□□□□ -0.24
CNOT1-215ENST00000569020 FAM87AP0C7U9 286 aa13.55□□□□□ -0.24
CNOT1-215ENST00000569020 WT1P19544 449 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms