RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 TCP11X2Q5H9J9 407 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 CDKAL1Q5VV42 579 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 LYPLAL1Q5VWZ2 237 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 AFMIDQ63HM1 303 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 RWDD4Q6NW29 188 aaKnown RBP8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 MED25Q71SY5 747 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 PPP1R3BQ86XI6 285 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 DNAAF5Q86Y56 855 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 SFRP1Q8N474 314 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 ARFGAP1Q8N6T3 406 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 SLC37A2Q8TED4 501 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 UBE2Q2Q8WVN8 375 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 KAT5Q92993 513 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 RNF31Q96EP0 1072 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 ELMO2Q96JJ3 720 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 C9orf72Q96LT7 481 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 TUBGCP2Q9BSJ2 902 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 NUDT9Q9BW91 350 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 TEX101Q9BY14 249 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 FRMD8Q9BZ67 464 aaPredicted RBP8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 SYNCQ9H7C4 482 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 SARS2Q9NP81 518 aaKnown RBP8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 SIDT1Q9NXL6 827 aaKnown RBP8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 DNAI1Q9UI46 699 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 CNTN6Q9UQ52 1028 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 ST14Q9Y5Y6 855 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 CSMD2Q7Z408 3487 aa8.99□□□□□ -0.97
VPS9D1-205ENST00000565452 TACC2O95359 2948 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 ANKHD1Q8IWZ3 2542 aaKnown RBP8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 GOLGA6L19H0YKK7 550 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 RAMP2O60895 175 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 TMEM63AO94886 807 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 PIGNO95427 931 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 SNRPB2P08579 225 aaKnown RBP8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 RHOQP17081 205 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 SSTR2P30874 369 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 SULT1E1P49888 294 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 SEPHS1P49903 392 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 RRADP55042 308 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 IQCB1Q15051 598 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 SLC25A52Q3SY17 297 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 FAM183BPQ6ZVS7 135 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 SLC26A9Q7LBE3 791 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 SLC9B2Q86UD5 537 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 ZDHHC17Q8IUH5 632 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 CREBRFQ8IUR6 639 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 WDTC1Q8N5D0 677 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 PAF1Q8N7H5 531 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 TMEM102Q8N9M5 508 aaPredicted RBP8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 GLIS1Q8NBF1 620 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 C1orf131Q8NDD1 294 aaKnown RBP8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 ZNF397Q8NF99 534 aaPredicted RBP8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 NT5C3BQ969T7 300 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 FCRL4Q96PJ5 515 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 CPXM1Q96SM3 734 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 BRD8Q9H0E9 1235 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 TSPY26PQ9H489 355 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 PDE7BQ9NP56 450 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 SAMSN1Q9NSI8 373 aaKnown RBP8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 FANCLQ9NW38 375 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 OR12D3Q9UGF7 316 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 SLC17A4Q9Y2C5 497 aa8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 DIDO1Q9BTC0 2240 aaKnown RBP8.98□□□□□ -0.97
VPS9D1-205ENST00000565452 ARHGEF17Q96PE2 2063 aaPredicted RBP8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 F5H423 210 aaPredicted RBP8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 PRICKLE3O43900 615 aaPredicted RBP8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 ALPPP05187 535 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 SLC2A4P14672 509 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 TFE3P19532 575 aaPredicted RBP8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 GNA15P30679 374 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 PTGIRP43119 386 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 POLD2P49005 469 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 RPS18P62269 152 aaKnown RBP8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 SH3BP2P78314 561 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 LRP8Q14114 963 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 ZNF235Q14590 738 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 FILIP1LQ4L180 1135 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 VWA3BQ502W6 1294 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 CRB2Q5IJ48 1285 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 ARTNQ5T4W7 220 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 FAM199XQ6PEV8 388 aaPredicted RBP8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 IYDQ6PHW0 289 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 OLFML1Q6UWY5 402 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 GBP6Q6ZN66 633 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 BPHLQ86WA6 291 aaPredicted RBP8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 CAMK1DQ8IU85 385 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 LZTR1Q8N653 840 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 AOPEPQ8N6M6 819 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 AVL9Q8NBF6 648 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 EHBP1Q8NDI1 1231 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 TM9SF4Q92544 642 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 SCARF2Q96GP6 870 aaPredicted RBP8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 OR2M4Q96R27 311 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 TUBGCP5Q96RT8 1024 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 NDST4Q9H3R1 872 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 NDFIP2Q9NV92 336 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 TMEM248Q9NWD8 314 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 LIMA1Q9UHB6 759 aaKnown RBP8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 ZNHIT2Q9UHR6 403 aa8.97□□□□□ -0.97
VPS9D1-205ENST00000565452 PLEKHM1Q9Y4G2 1056 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms