RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 ELOVL2Q9NXB9 296 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 CLDND1Q9NY35 253 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 SLC17A6Q9P2U8 582 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 GGT7Q9UJ14 662 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 PLLPQ9Y342 182 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 ARL5AQ9Y689 179 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 COMMD10Q9Y6G5 202 aa9.69□□□□□ -0.86
UBFD1-202ENST00000563366 A0A096LPK6 155 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 KLF11O14901 512 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 NPC1O15118 1278 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 TBX10O75333 385 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 PIGNO95427 931 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 GOT2P00505 430 aaKnown RBP9.68□□□□□ -0.86
UBFD1-202ENST00000563366 CISD3P0C7P0 127 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 PIRTP0C851 137 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 DHRS4L1P0CG22 281 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 ZNF30P17039 623 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 ETV4P43268 484 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 PDE1CQ14123 709 aaPredicted RBP9.68□□□□□ -0.86
UBFD1-202ENST00000563366 COL19A1Q14993 1142 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 LYPLAL1Q5VWZ2 237 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 ATG16L1Q676U5 607 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 TRIM68Q6AZZ1 485 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 KLC3Q6P597 504 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 GDPD4Q6W3E5 623 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 DPY19L3Q6ZPD9 716 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 TPRG1Q6ZUI0 275 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 MICALCLQ6ZW33 695 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 PTAR1Q7Z6K3 402 aaPredicted RBP9.68□□□□□ -0.86
UBFD1-202ENST00000563366 TBC1D1Q86TI0 1168 aaPredicted RBP9.68□□□□□ -0.86
UBFD1-202ENST00000563366 DENND6AQ8IWF6 608 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 CBARPQ8N350 705 aaPredicted RBP9.68□□□□□ -0.86
UBFD1-202ENST00000563366 TTC30BQ8N4P2 665 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 TERB1Q8NA31 727 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 MDGA1Q8NFP4 955 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 OR13C4Q8NGS5 318 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 OR2A12Q8NGT7 310 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 TTC8Q8TAM2 541 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 RDH11Q8TC12 318 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 PIH1D2Q8WWB5 315 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 ASIC4Q96FT7 647 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 SCRN2Q96FV2 425 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 ATXN7L3BQ96GX2 97 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 ELMO2Q96JJ3 720 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 TBATAQ96M53 351 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 LRRC3BQ96PB8 259 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 ZNF317Q96PQ6 595 aaPredicted RBP9.68□□□□□ -0.86
UBFD1-202ENST00000563366 FAM111AQ96PZ2 611 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 MCCC1Q96RQ3 725 aaPredicted RBP9.68□□□□□ -0.86
UBFD1-202ENST00000563366 CCT8L2Q96SF2 557 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 TRMT61BQ9BVS5 477 aaKnown RBP9.68□□□□□ -0.86
UBFD1-202ENST00000563366 APOL5Q9BWW9 433 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 S1PR5Q9H228 398 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 PRO3102Q9H379 93 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 RAD18Q9NS91 495 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 POLR3BQ9NW08 1133 aaPredicted RBP9.68□□□□□ -0.86
UBFD1-202ENST00000563366 CLEC1BQ9P126 229 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 SLC39A10Q9ULF5 831 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 MTO1Q9Y2Z2 717 aaKnown RBP9.68□□□□□ -0.86
UBFD1-202ENST00000563366 ACOT9Q9Y305 439 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 SPO11Q9Y5K1 396 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 SLC30A1Q9Y6M5 507 aa9.68□□□□□ -0.86
UBFD1-202ENST00000563366 C1orf232A0A0U1RR37 186 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 EDDM13A0A1B0GTR0 161 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 TSPAN11A1L157 253 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 CCDC162PA2VCL2 907 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 TCP11X1B4DZS4 312 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 EBAG9O00559 213 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 BNIP3LO60238 219 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 H2AFYO75367 372 aaKnown RBP9.67□□□□□ -0.86
UBFD1-202ENST00000563366 NDUFS3O75489 264 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 PRNPP04156 253 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 PRKCGP05129 697 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 C2P06681 752 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 CYP2A6P11509 494 aaPredicted RBP9.67□□□□□ -0.86
UBFD1-202ENST00000563366 ARSAP15289 507 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 EPB42P16452 691 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 ITGALP20701 1170 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 SLC8A1P32418 973 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 SUOXP51687 545 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 SEC24CP53992 1094 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 ADARP55265 1226 aaKnown RBP9.67□□□□□ -0.86
UBFD1-202ENST00000563366 TMPRSS15P98073 1019 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 MPP1Q00013 466 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 CACNG1Q06432 222 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 ASPHQ12797 758 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 ZKSCAN8Q15776 578 aaPredicted RBP9.67□□□□□ -0.86
UBFD1-202ENST00000563366 FAM83EQ2M2I3 478 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 ITPRIPL2Q3MIP1 535 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 GPR33Q49SQ1 333 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 TMEM215Q68D42 235 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 TANGO2Q6ICL3 276 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 DSG4Q86SJ6 1040 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 RAVER1Q8IY67 606 aaKnown RBP9.67□□□□□ -0.86
UBFD1-202ENST00000563366 GPATCH11Q8N954 259 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 CCDC63Q8NA47 563 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 SMRP1Q8NCR6 262 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 OR6K2Q8NGY2 324 aa9.67□□□□□ -0.86
UBFD1-202ENST00000563366 ZNF473Q8WTR7 871 aaKnown RBP9.67□□□□□ -0.86
UBFD1-202ENST00000563366 FRS2Q8WU20 508 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms