RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 TRIM74Q86UV6 250 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 HID1Q8IV36 788 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 C17orf53Q8N3J3 647 aaPredicted RBP8.5□□□□□ -1.05
UBR1-204ENST00000563239 TAB3Q8N5C8 712 aaPredicted RBP8.5□□□□□ -1.05
UBR1-204ENST00000563239 PDCD7Q8N8D1 485 aaKnown RBP8.5□□□□□ -1.05
UBR1-204ENST00000563239 OR56A4Q8NGH8 313 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 OR4C6Q8NH72 309 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 CCHCR1Q8TD31 782 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 TBATAQ96M53 351 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 SRPK1Q96SB4 655 aaKnown RBP8.5□□□□□ -1.05
UBR1-204ENST00000563239 CDC6Q99741 560 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 TBL1YQ9BQ87 522 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 GPR63Q9BZJ6 419 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 CEP295Q9C0D2 2601 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 TRABDQ9H4I3 376 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 ETNK1Q9HBU6 452 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 BPIFA1Q9NP55 256 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 PHPT1Q9NRX4 125 aaPredicted RBP8.5□□□□□ -1.05
UBR1-204ENST00000563239 PKD2L2Q9NZM6 624 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 IL17CQ9P0M4 197 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 APOBEC3BQ9UH17 382 aaKnown RBP8.5□□□□□ -1.05
UBR1-204ENST00000563239 SNX12Q9UMY4 172 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 ZNF148Q9UQR1 794 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 SLC17A4Q9Y2C5 497 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 TMEM98Q9Y2Y6 226 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 KCTD3Q9Y597 815 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 PCYT1BQ9Y5K3 369 aaPredicted RBP8.5□□□□□ -1.05
UBR1-204ENST00000563239 ST14Q9Y5Y6 855 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 OAS3Q9Y6K5 1087 aaKnown RBP8.5□□□□□ -1.05
UBR1-204ENST00000563239 CSNK1G3Q9Y6M4 447 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 U3KQA8 63 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 FRYQ5TBA9 3013 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 MAST4O15021 2626 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 GOLGA6CA6NDK9 693 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 GOLGA6BA6NDN3 693 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 LMO7DNF2Z398 122 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 CES2O00748 559 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 INPP4BO15327 924 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 YY2O15391 372 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 FFAR2O15552 330 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 TNFSF14O43557 240 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 BUD23O43709 281 aaKnown RBP8.49□□□□□ -1.05
UBR1-204ENST00000563239 SUN1O94901 812 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 RASGRP1O95267 797 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 AP2A1O95782 977 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 TOP3BO95985 862 aaKnown RBP8.49□□□□□ -1.05
UBR1-204ENST00000563239 SLC4A1P02730 911 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 ADRB1P08588 477 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 FTH1P19P0C7X4 201 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 GOLGA6DP0CG33 693 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 MYF5P13349 255 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 HTR1BP28222 390 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 PMLP29590 882 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 GPR1P46091 355 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 GNG11P61952 73 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 DNAJC3Q13217 504 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 CYP1B1Q16678 543 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 PRRT3Q5FWE3 981 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 PAPD7Q5XG87 772 aaKnown RBP8.49□□□□□ -1.05
UBR1-204ENST00000563239 ALS2CLQ60I27 953 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 MICALCLQ6ZW33 695 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 RD3Q7Z3Z2 195 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 NRROSQ86YC3 692 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 PNPLA1Q8N8W4 532 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 CCL4L1Q8NHW4 92 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 ACTRT1Q8TDG2 376 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 BLOC1S5Q8TDH9 187 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 LMX1AQ8TE12 382 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 BTN2A2Q8WVV5 523 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 MAIP1Q8WWC4 291 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 HIC2Q96JB3 615 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 CNDP2Q96KP4 475 aaKnown RBP8.49□□□□□ -1.05
UBR1-204ENST00000563239 PPP1R2P1Q96PQ5 205 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 FSD1LQ9BXM9 530 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 AP1M1Q9BXS5 423 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 SLC13A1Q9BZW2 595 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 TMEM168Q9H0V1 697 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 IL26Q9NPH9 171 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 GOLGA6AQ9NYA3 693 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 NLGN3Q9NZ94 848 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 HACD3Q9P035 362 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 SPASTQ9UBP0 616 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 KLQ9UEF7 1012 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 SUFUQ9UMX1 484 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 NEU2Q9Y3R4 380 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 PLEKHM1Q9Y4G2 1056 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 ARL5AQ9Y689 179 aa8.49□□□□□ -1.05
UBR1-204ENST00000563239 PRSS38A1L453 326 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 H3BM21 787 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 PGRMC1O00264 195 aaKnown RBP8.48□□□□□ -1.05
UBR1-204ENST00000563239 PDE2AO00408 941 aaPredicted RBP8.48□□□□□ -1.05
UBR1-204ENST00000563239 TPP1O14773 563 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 LDB2O43679 373 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 DNAJC6O75061 913 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 LDOC1O95751 146 aaPredicted RBP8.48□□□□□ -1.05
UBR1-204ENST00000563239 TNFP01375 233 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 IFNB1P01574 187 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 PYGLP06737 847 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 IVLP07476 585 aa8.48□□□□□ -1.05
UBR1-204ENST00000563239 TPH1P17752 444 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms