RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 OR6J1Q8NGC5 347 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 B4GALNT2Q8NHY0 566 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 OIT3Q8WWZ8 545 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 SLC41A2Q96JW4 573 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 GCNAQ96QF7 691 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 FAM110AQ9BQ89 295 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 ANKRD2Q9GZV1 360 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 MRPL44Q9H9J2 332 aaKnown RBP3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 LTB4R2Q9NPC1 389 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 OR6C3Q9NZP0 311 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 AGO1Q9UL18 857 aaKnown RBP3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 MYO6Q9UM54 1294 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 MTMR6Q9Y217 621 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 hCG_1809904A0A1W2PP81 198 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 A0A1W2PPE2 198 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 A0A1W2PR64 198 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 A8MZ25 164 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 H7C0S8 307 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 J3KR12 359 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 TIMM23O14925 209 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 HS6ST1O60243 411 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 PSMD10O75832 226 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 VNN2O95498 520 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 GLUD1P00367 558 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 NR2F1P10589 423 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 CDC25AP30304 524 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 GLUD2P49448 558 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 COMPP49747 757 aaPredicted RBP3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 MXI1P50539 228 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 HSD17B4P51659 736 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 RAD23BP54727 409 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 PPARDQ03181 441 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 CRYZQ08257 329 aaKnown RBP3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 DSC1Q08554 894 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 AIMP1Q12904 312 aaKnown RBP3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 TRAF2Q12933 501 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 ITGADQ13349 1161 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 CAMK2DQ13557 499 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 NAB2Q15742 525 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 NTRK2Q16620 822 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 KRT24Q2M2I5 525 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 USP41Q3LFD5 358 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 TDRD12Q587J7 1177 aaKnown RBP3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 PPP6R3Q5H9R7 873 aaPredicted RBP3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 EFHC1Q5JVL4 640 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 PLEKHS1Q5SXH7 462 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 C6orf141Q5SZD1 244 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 TMEM198Q66K66 360 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 ANKRD54Q6NXT1 300 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 SARM1Q6SZW1 724 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 SHFQ7M4L6 423 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 PLPPR4Q7Z2D5 763 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 KRT77Q7Z794 578 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 GALNT13Q8IUC8 556 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 WDR63Q8IWG1 891 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 GPATCH11Q8N954 259 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 IL17RCQ8NAC3 791 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 HJURPQ8NCD3 748 aaPredicted RBP3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 Q8NFD4 153 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 OR14L1PQ8NHC6 308 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 HUS1BQ8NHY5 278 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 ADAMTS14Q8WXS8 1223 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 ERGIC1Q969X5 290 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 VPS33AQ96AX1 596 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 MIB2Q96AX9 1013 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 THOC3Q96J01 351 aaKnown RBP3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 NCAPGQ9BPX3 1015 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 MMTAG2Q9BU76 263 aaKnown RBP3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 C1QTNF5Q9BXJ0 243 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 OR10A4Q9H209 315 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 ESRP2Q9H6T0 727 aaKnown RBP3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 MKKSQ9NPJ1 570 aaPredicted RBP3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 CISD1Q9NZ45 108 aaKnown RBP3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 OGFRQ9NZT2 677 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 TRPV2Q9Y5S1 764 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 STON1Q9Y6Q2 735 aa3.29□□□□□ -1.88
SHCBP1-202ENST00000563219 CKAP5Q14008 2032 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 FAM237AA0A1B0GTK4 181 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 TMEM202A6NGA9 273 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 URADA6NGE7 173 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 UBE2CO00762 179 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 HSPA12AO43301 675 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 NDUFS3O75489 264 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 SLC25A12O75746 678 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 KCNK5O95279 499 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 GGPS1O95749 300 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 RPN1P04843 607 aaKnown RBP3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 T-ENOLP0DO92 83 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 DDX5P17844 614 aaKnown RBP3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 ANXA7P20073 488 aaKnown RBP3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 MAOAP21397 527 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 HNRNPH1P31943 449 aaKnown RBP3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 COPB2P35606 906 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 PIGAP37287 484 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 CAPZA2P47755 286 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 LMAN1P49257 510 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 EGR4Q05215 589 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 NEDD9Q14511 834 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 C2orf68Q2NKX9 166 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 LETM2Q2VYF4 491 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms