RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 GJC1P36383 396 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 PRKCIP41743 596 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 MAPK9P45984 424 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 RAB15P59190 212 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 LRP8Q14114 963 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 PIGHQ14442 188 aaPredicted RBP12.91□□□□□ -0.34
SF3B3-202ENST00000562722 ANO6Q4KMQ2 910 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 PYCR3Q53H96 274 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 TDRD12Q587J7 1177 aaKnown RBP12.91□□□□□ -0.34
SF3B3-202ENST00000562722 CCDC122Q5T0U0 273 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 ANKS6Q68DC2 871 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 TMEM71Q6P5X7 295 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 EXD1Q8NHP7 514 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 SLC37A2Q8TED4 501 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 PIH1D2Q8WWB5 315 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 BTBD6Q96KE9 485 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 SMIM14Q96QK8 99 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 RIOK2Q9BVS4 552 aaKnown RBP12.91□□□□□ -0.34
SF3B3-202ENST00000562722 STN1Q9H668 368 aaKnown RBP12.91□□□□□ -0.34
SF3B3-202ENST00000562722 PCDH18Q9HCL0 1135 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 HAUS2Q9NVX0 235 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 GEMIN8Q9NWZ8 242 aaKnown RBP12.91□□□□□ -0.34
SF3B3-202ENST00000562722 OCIAD1Q9NX40 245 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 ZNHIT2Q9UHR6 403 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 PRKAB1Q9Y478 270 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 MYO18BQ8IUG5 2567 aa12.91□□□□□ -0.34
SF3B3-202ENST00000562722 ZNF891A8MT65 544 aaPredicted RBP12.9□□□□□ -0.34
SF3B3-202ENST00000562722 SMTNL1A8MU46 457 aa12.9□□□□□ -0.34
SF3B3-202ENST00000562722 B4E171 279 aa12.9□□□□□ -0.34
SF3B3-202ENST00000562722 RAD1O60671 282 aa12.9□□□□□ -0.34
SF3B3-202ENST00000562722 ZNF30P17039 623 aa12.9□□□□□ -0.34
SF3B3-202ENST00000562722 CA4P22748 312 aa12.9□□□□□ -0.34
SF3B3-202ENST00000562722 ANP32AP39687 249 aaKnown RBP12.9□□□□□ -0.34
SF3B3-202ENST00000562722 TSPAN7P41732 249 aa12.9□□□□□ -0.34
SF3B3-202ENST00000562722 CCR10P46092 362 aa12.9□□□□□ -0.34
SF3B3-202ENST00000562722 ZNF165P49910 485 aa12.9□□□□□ -0.34
SF3B3-202ENST00000562722 POLE2P56282 527 aa12.9□□□□□ -0.34
SF3B3-202ENST00000562722 PTSQ03393 145 aa12.9□□□□□ -0.34
SF3B3-202ENST00000562722 NFATC2Q13469 925 aa12.9□□□□□ -0.34
SF3B3-202ENST00000562722 TXNRD3NBQ6F5E7 133 aa12.9□□□□□ -0.34
SF3B3-202ENST00000562722 ZNF765Q7L2R6 523 aa12.9□□□□□ -0.34
SF3B3-202ENST00000562722 CHST15Q7LFX5 561 aaPredicted RBP12.9□□□□□ -0.34
SF3B3-202ENST00000562722 PTRH1Q86Y79 214 aaKnown RBP12.9□□□□□ -0.34
SF3B3-202ENST00000562722 LPCAT1Q8NF37 534 aa12.9□□□□□ -0.34
SF3B3-202ENST00000562722 TEKT4Q8WW24 435 aa12.9□□□□□ -0.34
SF3B3-202ENST00000562722 NCSTNQ92542 709 aa12.9□□□□□ -0.34
SF3B3-202ENST00000562722 KIAA1143Q96AT1 154 aaPredicted RBP12.9□□□□□ -0.34
SF3B3-202ENST00000562722 SCARF2Q96GP6 870 aaPredicted RBP12.9□□□□□ -0.34
SF3B3-202ENST00000562722 AGAP2Q99490 1192 aa12.9□□□□□ -0.34
SF3B3-202ENST00000562722 CTRCQ99895 268 aa12.9□□□□□ -0.34
SF3B3-202ENST00000562722 SLC12A9Q9BXP2 914 aa12.9□□□□□ -0.34
SF3B3-202ENST00000562722 IP6K2Q9UHH9 426 aa12.9□□□□□ -0.34
SF3B3-202ENST00000562722 ANAPC7Q9UJX3 599 aa12.9□□□□□ -0.34
SF3B3-202ENST00000562722 DNPEPQ9ULA0 475 aa12.9□□□□□ -0.34
SF3B3-202ENST00000562722 CHKBQ9Y259 395 aa12.9□□□□□ -0.34
SF3B3-202ENST00000562722 PPIL1Q9Y3C6 166 aa12.9□□□□□ -0.34
SF3B3-202ENST00000562722 A0A0J9YYE9 177 aa12.89□□□□□ -0.35
SF3B3-202ENST00000562722 MFSD11O43934 449 aa12.89□□□□□ -0.35
SF3B3-202ENST00000562722 SNX2O60749 519 aa12.89□□□□□ -0.35
SF3B3-202ENST00000562722 MBD3O95983 291 aa12.89□□□□□ -0.35
SF3B3-202ENST00000562722 TRBC1P01850 177 aa12.89□□□□□ -0.35
SF3B3-202ENST00000562722 ATP1A1P05023 1023 aaKnown RBP12.89□□□□□ -0.35
SF3B3-202ENST00000562722 MAN1A1P33908 653 aa12.89□□□□□ -0.35
SF3B3-202ENST00000562722 NOP2P46087 812 aaKnown RBP12.89□□□□□ -0.35
SF3B3-202ENST00000562722 FASLGP48023 281 aa12.89□□□□□ -0.35
SF3B3-202ENST00000562722 ARSDP51689 593 aa12.89□□□□□ -0.35
SF3B3-202ENST00000562722 STC1P52823 247 aa12.89□□□□□ -0.35
SF3B3-202ENST00000562722 DSC2Q02487 901 aa12.89□□□□□ -0.35
SF3B3-202ENST00000562722 HHEXQ03014 270 aa12.89□□□□□ -0.35
SF3B3-202ENST00000562722 TLE1Q04724 770 aa12.89□□□□□ -0.35
SF3B3-202ENST00000562722 MMRN1Q13201 1228 aa12.89□□□□□ -0.35
SF3B3-202ENST00000562722 KCNAB2Q13303 367 aa12.89□□□□□ -0.35
SF3B3-202ENST00000562722 SQSTM1Q13501 440 aa12.89□□□□□ -0.35
SF3B3-202ENST00000562722 HADHQ16836 314 aaKnown RBP12.89□□□□□ -0.35
SF3B3-202ENST00000562722 TIGD7Q6NT04 549 aaPredicted RBP12.89□□□□□ -0.35
SF3B3-202ENST00000562722 KDELC2Q7Z4H8 507 aa12.89□□□□□ -0.35
SF3B3-202ENST00000562722 LRRC49Q8IUZ0 686 aa12.89□□□□□ -0.35
SF3B3-202ENST00000562722 SFRP1Q8N474 314 aa12.89□□□□□ -0.35
SF3B3-202ENST00000562722 TEFMQ96QE5 360 aaKnown RBP12.89□□□□□ -0.35
SF3B3-202ENST00000562722 NUP85Q9BW27 656 aa12.89□□□□□ -0.35
SF3B3-202ENST00000562722 THAP2Q9H0W7 228 aa12.89□□□□□ -0.35
SF3B3-202ENST00000562722 ISCUQ9H1K1 167 aa12.89□□□□□ -0.35
SF3B3-202ENST00000562722 ADNPQ9H2P0 1102 aa12.89□□□□□ -0.35
SF3B3-202ENST00000562722 GPN2Q9H9Y4 310 aaPredicted RBP12.89□□□□□ -0.35
SF3B3-202ENST00000562722 RBM22Q9NW64 420 aaKnown RBP eCLIP12.89□□□□□ -0.358e-7■■■■■ 34.1
SF3B3-202ENST00000562722 KLHL3Q9UH77 587 aa12.89□□□□□ -0.35
SF3B3-202ENST00000562722 KCNK6Q9Y257 313 aa12.89□□□□□ -0.35
SF3B3-202ENST00000562722 ARHGEF17Q96PE2 2063 aaPredicted RBP12.89□□□□□ -0.35
SF3B3-202ENST00000562722 C1orf232A0A0U1RR37 186 aa12.88□□□□□ -0.35
SF3B3-202ENST00000562722 FZD6O60353 706 aa12.88□□□□□ -0.35
SF3B3-202ENST00000562722 CLDN7O95471 211 aa12.88□□□□□ -0.35
SF3B3-202ENST00000562722 EML2O95834 649 aa12.88□□□□□ -0.35
SF3B3-202ENST00000562722 SERPINC1P01008 464 aa12.88□□□□□ -0.35
SF3B3-202ENST00000562722 CD48P09326 243 aa12.88□□□□□ -0.35
SF3B3-202ENST00000562722 PRKAR1AP10644 381 aa12.88□□□□□ -0.35
SF3B3-202ENST00000562722 ACP5P13686 325 aa12.88□□□□□ -0.35
SF3B3-202ENST00000562722 CES1P23141 567 aa12.88□□□□□ -0.35
SF3B3-202ENST00000562722 GARSP41250 739 aaKnown RBP12.88□□□□□ -0.35
SF3B3-202ENST00000562722 SLC25A11Q02978 314 aaKnown RBP12.88□□□□□ -0.35
SF3B3-202ENST00000562722 NFKBIBQ15653 356 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms