RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 NRSN1Q8IZ57 195 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 SLC35F6Q8N357 371 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 CCL4L1Q8NHW4 92 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 GLMNQ92990 594 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 DUSP23Q9BVJ7 150 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 TLR10Q9BXR5 811 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 CARD9Q9H257 536 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 USP29Q9HBJ7 922 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 GPR27Q9NS67 375 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 EVA1BQ9NVM1 165 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 NLGN3Q9NZ94 848 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 SUFUQ9UMX1 484 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 PKP3Q9Y446 797 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 NCOR2Q9Y618 2525 aa10.07□□□□□ -0.8
HERC1-212ENST00000561348 GOLGA4Q13439 2230 aaKnown RBP10.06□□□□□ -0.8
HERC1-212ENST00000561348 LOC285095A0A1B0GVY8 99 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 FADS2P1A8MWK0 482 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 STX7O15400 261 aaKnown RBP10.06□□□□□ -0.8
HERC1-212ENST00000561348 LIASO43766 372 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 SNX2O60749 519 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 MTX2O75431 263 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 TRIM16O95361 564 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 METTL18O95568 372 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 FGF1P05230 155 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 BPIP17213 487 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 HLA-DPA1P20036 260 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 MSNP26038 577 aaKnown RBP10.06□□□□□ -0.8
HERC1-212ENST00000561348 AK4P27144 223 aaPredicted RBP10.06□□□□□ -0.8
HERC1-212ENST00000561348 PMLP29590 882 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 TRIM23P36406 574 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 RPIAP49247 311 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 DUSP3P51452 185 aaPredicted RBP10.06□□□□□ -0.8
HERC1-212ENST00000561348 ILF3Q12906 894 aaKnown RBP eCLIP10.06□□□□□ -0.8
HERC1-212ENST00000561348 NR0B2Q15466 257 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 PARP6Q2NL67 630 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 PLA2G4EQ3MJ16 856 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 ZCCHC8Q6NZY4 707 aaKnown RBP10.06□□□□□ -0.8
HERC1-212ENST00000561348 CRTC3Q6UUV7 619 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 FAM151BQ6UXP7 276 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 PPP1R21Q6ZMI0 780 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 ZNF662Q6ZS27 426 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 CHST15Q7LFX5 561 aaPredicted RBP10.06□□□□□ -0.8
HERC1-212ENST00000561348 EFL1Q7Z2Z2 1120 aaKnown RBP10.06□□□□□ -0.8
HERC1-212ENST00000561348 TMC3Q7Z5M5 1100 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 GALNT13Q8IUC8 556 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 FSTL5Q8N475 847 aaPredicted RBP10.06□□□□□ -0.8
HERC1-212ENST00000561348 PDCD7Q8N8D1 485 aaKnown RBP10.06□□□□□ -0.8
HERC1-212ENST00000561348 DNAAF3Q8N9W5 541 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 GPR26Q8NDV2 337 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 SLC35B2Q8TB61 432 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 BAHD1Q8TBE0 780 aaPredicted RBP10.06□□□□□ -0.8
HERC1-212ENST00000561348 IFI44Q8TCB0 444 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 PTCD2Q8WV60 388 aaKnown RBP10.06□□□□□ -0.8
HERC1-212ENST00000561348 EID2BQ96D98 161 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 MS4A14Q96JA4 679 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 DCBLD2Q96PD2 775 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 TBL1YQ9BQ87 522 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 TEX101Q9BY14 249 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 PLEKHM1Q9Y4G2 1056 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 ARL5AQ9Y689 179 aa10.06□□□□□ -0.8
HERC1-212ENST00000561348 C5orf60A6NFR6 353 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 C2orf81A6NN90 581 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 USP27XA6NNY8 438 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 LMO7DNF2Z398 122 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 CCL22O00626 93 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 CEACAM5P06731 702 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 PYGLP06737 847 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 ZSCAN5DPP0CG00 497 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 ACTR1BP42025 376 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 KCNJ1P48048 391 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 ACADVLP49748 655 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 VPS41P49754 854 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 ACTR1AP61163 376 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 DPTQ07507 201 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 TRIP13Q15645 432 aaPredicted RBP10.05□□□□□ -0.8
HERC1-212ENST00000561348 SLC14A2Q15849 920 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 P3H1Q32P28 736 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 PROX2Q3B8N5 592 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 GUSBP11Q6P575 273 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 ADAMTSL4Q6UY14 1074 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 ZNF765Q7L2R6 523 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 GLRX5Q86SX6 157 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 SFTPA2Q8IWL1 248 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 REXO1L1PQ8IX06 675 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 SLC35F3Q8IY50 421 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 CBARPQ8N350 705 aaPredicted RBP10.05□□□□□ -0.8
HERC1-212ENST00000561348 Q8N9G6 341 aaPredicted RBP10.05□□□□□ -0.8
HERC1-212ENST00000561348 KYQ8NBH2 561 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 MAPK15Q8TD08 544 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 MAIP1Q8WWC4 291 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 ADAMTS14Q8WXS8 1223 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 TADA1Q96BN2 335 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 TTC25Q96NG3 672 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 OR2M4Q96R27 311 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 LYSMD1Q96S90 227 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 SRPK1Q96SB4 655 aaKnown RBP10.05□□□□□ -0.8
HERC1-212ENST00000561348 GORASP1Q9BQQ3 440 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 AP1M1Q9BXS5 423 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 GSDMCQ9BYG8 508 aa10.05□□□□□ -0.8
HERC1-212ENST00000561348 ZMYND15Q9H091 742 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms