RNA–Protein interactions for RNA: ENST00000560982.5

USP8-215, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 3

Gene USP8, Length 410 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-215ENST00000560982 MED8Q96G25 268 aa13.9□□□□□ -0.18
USP8-215ENST00000560982 TSGA13Q96PP4 275 aa13.9□□□□□ -0.18
USP8-215ENST00000560982 AGAP2Q99490 1192 aa13.9□□□□□ -0.18
USP8-215ENST00000560982 AMACRQ9UHK6 382 aa13.9□□□□□ -0.18
USP8-215ENST00000560982 DNPEPQ9ULA0 475 aa13.9□□□□□ -0.18
USP8-215ENST00000560982 PCDHB11Q9Y5F2 797 aa13.9□□□□□ -0.18
USP8-215ENST00000560982 SETXQ7Z333 2677 aaKnown RBP13.89□□□□□ -0.19
USP8-215ENST00000560982 IGHV5-10-1A0A0J9YXX1 117 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 HGSO14964 777 aaPredicted RBP13.89□□□□□ -0.19
USP8-215ENST00000560982 PPM1DO15297 605 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 INPP4BO15327 924 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 CLDN7O95471 211 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 HLA-DQB2P05538 268 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 CCL4P13236 92 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 CASP14P31944 242 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 TAS2R40P59535 323 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 GBE1Q04446 702 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 NIPAL4Q0D2K0 466 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 PYCR3Q53H96 274 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 MANEAQ5SRI9 462 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 ZFYVE27Q5T4F4 411 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 TMEM164Q5U3C3 297 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 NKAIN2Q5VXU1 208 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 VASH2Q86V25 355 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 NLRP8Q86W28 1048 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 GALNT13Q8IUC8 556 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 NRSN1Q8IZ57 195 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 LPCAT1Q8NF37 534 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 EXD1Q8NHP7 514 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 ARRDC2Q8TBH0 407 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 LRRN4Q8WUT4 740 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 COX14Q96I36 57 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 CCDC74BQ96LY2 380 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 RIOK2Q9BVS4 552 aaKnown RBP13.89□□□□□ -0.19
USP8-215ENST00000560982 PCDH9Q9HC56 1237 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 IFNKQ9P0W0 207 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 UVRAGQ9P2Y5 699 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 NENFQ9UMX5 172 aa13.89□□□□□ -0.19
USP8-215ENST00000560982 ZFC3H1O60293 1989 aaKnown RBP13.89□□□□□ -0.19
USP8-215ENST00000560982 COL6A6A6NMZ7 2263 aa13.88□□□□□ -0.19
USP8-215ENST00000560982 IGHV1OR21-1A0A087WYE8 117 aa13.88□□□□□ -0.19
USP8-215ENST00000560982 B8ZZF3 427 aa13.88□□□□□ -0.19
USP8-215ENST00000560982 J3QKU1 62 aa13.88□□□□□ -0.19
USP8-215ENST00000560982 ASMTLO95671 621 aa13.88□□□□□ -0.19
USP8-215ENST00000560982 PRLP01236 227 aa13.88□□□□□ -0.19
USP8-215ENST00000560982 KRT7P08729 469 aa13.88□□□□□ -0.19
USP8-215ENST00000560982 H2AFZP0C0S5 128 aa13.88□□□□□ -0.19
USP8-215ENST00000560982 MX2P20592 715 aa13.88□□□□□ -0.19
USP8-215ENST00000560982 CD82P27701 267 aa13.88□□□□□ -0.19
USP8-215ENST00000560982 LIMK2P53671 638 aa13.88□□□□□ -0.19
USP8-215ENST00000560982 RPL26P61254 145 aaKnown RBP13.88□□□□□ -0.19
USP8-215ENST00000560982 LRP8Q14114 963 aa13.88□□□□□ -0.19
USP8-215ENST00000560982 H2AFVQ71UI9 128 aa13.88□□□□□ -0.19
USP8-215ENST00000560982 DTX1Q86Y01 620 aa13.88□□□□□ -0.19
USP8-215ENST00000560982 PQLC3Q8N755 202 aa13.88□□□□□ -0.19
USP8-215ENST00000560982 CCNYQ8ND76 341 aa13.88□□□□□ -0.19
USP8-215ENST00000560982 OR4D9Q8NGE8 314 aa13.88□□□□□ -0.19
USP8-215ENST00000560982 CTNNBL1Q8WYA6 563 aaPredicted RBP13.88□□□□□ -0.19
USP8-215ENST00000560982 FAF2Q96CS3 445 aa13.88□□□□□ -0.19
USP8-215ENST00000560982 HDAC11Q96DB2 347 aa13.88□□□□□ -0.19
USP8-215ENST00000560982 PACSIN1Q9BY11 444 aa13.88□□□□□ -0.19
USP8-215ENST00000560982 B3GNT4Q9C0J1 378 aa13.88□□□□□ -0.19
USP8-215ENST00000560982 KCNK4Q9NYG8 393 aa13.88□□□□□ -0.19
USP8-215ENST00000560982 RPL26L1Q9UNX3 145 aaKnown RBP13.88□□□□□ -0.19
USP8-215ENST00000560982 AHCTF1Q8WYP5 2266 aa13.87□□□□□ -0.19
USP8-215ENST00000560982 TRBV23OR9-2A0A075B6M9 112 aa13.87□□□□□ -0.19
USP8-215ENST00000560982 C1orf232A0A0U1RR37 186 aa13.87□□□□□ -0.19
USP8-215ENST00000560982 ATP1A1P05023 1023 aaKnown RBP13.87□□□□□ -0.19
USP8-215ENST00000560982 FGF3P11487 239 aaPredicted RBP13.87□□□□□ -0.19
USP8-215ENST00000560982 MPSTP25325 297 aa13.87□□□□□ -0.19
USP8-215ENST00000560982 CSF2RBP32927 897 aa13.87□□□□□ -0.19
USP8-215ENST00000560982 PPM1FP49593 454 aaPredicted RBP13.87□□□□□ -0.19
USP8-215ENST00000560982 SLC10A2Q12908 348 aaPredicted RBP13.87□□□□□ -0.19
USP8-215ENST00000560982 TRA2AQ13595 282 aaKnown RBP eCLIP13.87□□□□□ -0.19
USP8-215ENST00000560982 RAVER1Q8IY67 606 aaKnown RBP13.87□□□□□ -0.19
USP8-215ENST00000560982 CCDC13Q8IYE1 715 aa13.87□□□□□ -0.19
USP8-215ENST00000560982 SLC37A2Q8TED4 501 aa13.87□□□□□ -0.19
USP8-215ENST00000560982 ZNF830Q96NB3 372 aaPredicted RBP13.87□□□□□ -0.19
USP8-215ENST00000560982 TAAR9Q96RI9 348 aa13.87□□□□□ -0.19
USP8-215ENST00000560982 LYSMD1Q96S90 227 aa13.87□□□□□ -0.19
USP8-215ENST00000560982 DPYSL5Q9BPU6 564 aa13.87□□□□□ -0.19
USP8-215ENST00000560982 ZMYND15Q9H091 742 aa13.87□□□□□ -0.19
USP8-215ENST00000560982 DTLQ9NZJ0 730 aa13.87□□□□□ -0.19
USP8-215ENST00000560982 VPS18Q9P253 973 aa13.87□□□□□ -0.19
USP8-215ENST00000560982 ZNHIT2Q9UHR6 403 aa13.87□□□□□ -0.19
USP8-215ENST00000560982 LCMT1Q9UIC8 334 aa13.87□□□□□ -0.19
USP8-215ENST00000560982 PCDHGA4Q9Y5G9 962 aa13.87□□□□□ -0.19
USP8-215ENST00000560982 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.87□□□□□ -0.196e-6■□□□□ 9.8
USP8-215ENST00000560982 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.86□□□□□ -0.19
USP8-215ENST00000560982 STMND1H3BQB6 276 aa13.86□□□□□ -0.19
USP8-215ENST00000560982 KCNK1O00180 336 aa13.86□□□□□ -0.19
USP8-215ENST00000560982 DNAJC6O75061 913 aa13.86□□□□□ -0.19
USP8-215ENST00000560982 JCHAINP01591 159 aa13.86□□□□□ -0.19
USP8-215ENST00000560982 THRAP10827 490 aa13.86□□□□□ -0.19
USP8-215ENST00000560982 KDELR1P24390 212 aa13.86□□□□□ -0.19
USP8-215ENST00000560982 HNRNPH3P31942 346 aaKnown RBP13.86□□□□□ -0.19
USP8-215ENST00000560982 CSTF2P33240 577 aaKnown RBP eCLIP13.86□□□□□ -0.19
USP8-215ENST00000560982 MAN1A1P33908 653 aa13.86□□□□□ -0.19
USP8-215ENST00000560982 CD86P42081 329 aa13.86□□□□□ -0.19
USP8-215ENST00000560982 FASLGP48023 281 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms