RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 TWIST2Q8WVJ9 160 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 EFHD2Q96C19 240 aaPredicted RBP16.45■□□□□ 0.22
TPM1-228ENST00000560975 TEX37Q96LM6 180 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 NPY6RQ99463 290 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 ALOXE3Q9BYJ1 711 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 NTN4Q9HB63 628 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 PDE10AQ9Y233 779 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 SNX5Q9Y5X3 404 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 PSME4Q14997 1843 aa16.45■□□□□ 0.22
TPM1-228ENST00000560975 BEST1O76090 585 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 UGT2B4P06133 528 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 IMPDH1P20839 514 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 ACADSBP45954 432 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 ADAM17P78536 824 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 ECT2LQ008S8 904 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 SNX17Q15036 470 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 ZNF678Q5SXM1 525 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 HS3ST5Q8IZT8 346 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 CLYBLQ8N0X4 340 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 C2CD4AQ8NCU7 369 aaPredicted RBP16.44■□□□□ 0.22
TPM1-228ENST00000560975 OR7A2PQ8NGA2 310 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 SH3RF2Q8TEC5 729 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 PTCD2Q8WV60 388 aaKnown RBP16.44■□□□□ 0.22
TPM1-228ENST00000560975 WNT8BQ93098 351 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 C12orf42Q96LP6 360 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 OAS3Q9Y6K5 1087 aaKnown RBP16.44■□□□□ 0.22
TPM1-228ENST00000560975 C16orf96A6NNT2 1141 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 UGT2B11O75310 529 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 DAB1O75553 588 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 RBP1P09455 135 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 ALDH3A2P51648 485 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 OR4D2P58180 307 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 CTU2Q2VPK5 515 aaKnown RBP16.44■□□□□ 0.22
TPM1-228ENST00000560975 TFAP2DQ7Z6R9 452 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 ADCK1Q86TW2 530 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 GOLM1Q8NBJ4 401 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 NSUN5Q96P11 429 aaKnown RBP16.44■□□□□ 0.22
TPM1-228ENST00000560975 DNAJC5Q9H3Z4 198 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 INTS7Q9NVH2 962 aaKnown RBP16.44■□□□□ 0.22
TPM1-228ENST00000560975 KLHL3Q9UH77 587 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 STAP1Q9ULZ2 295 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 DFFAO00273 331 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 CCL22O00626 93 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 FSHRP23945 695 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 HRH2P25021 359 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 GP2P55259 537 aaKnown RBP16.44■□□□□ 0.22
TPM1-228ENST00000560975 VBP1P61758 197 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 HABP4Q5JVS0 413 aaKnown RBP16.44■□□□□ 0.22
TPM1-228ENST00000560975 C6orf141Q5SZD1 244 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 NBPF12Q5TAG4 269 aaPredicted RBP16.44■□□□□ 0.22
TPM1-228ENST00000560975 RNF19BQ6ZMZ0 732 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 KIAA0408Q6ZU52 694 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 DCP1BQ8IZD4 617 aaKnown RBP16.44■□□□□ 0.22
TPM1-228ENST00000560975 OR52K2Q8NGK3 314 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 PSMA8Q8TAA3 256 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 SPATA33Q96N06 139 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 CGREF1Q99674 301 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 ZNF639Q9UID6 485 aa16.44■□□□□ 0.22
TPM1-228ENST00000560975 SOWAHBA6NEL2 793 aa16.43■□□□□ 0.22
TPM1-228ENST00000560975 SLC4A1P02730 911 aa16.43■□□□□ 0.22
TPM1-228ENST00000560975 S100BP04271 92 aaPredicted RBP16.43■□□□□ 0.22
TPM1-228ENST00000560975 SERPINB1P30740 379 aa16.43■□□□□ 0.22
TPM1-228ENST00000560975 PIGAP37287 484 aa16.43■□□□□ 0.22
TPM1-228ENST00000560975 RBM48Q5RL73 367 aaKnown RBP16.43■□□□□ 0.22
TPM1-228ENST00000560975 ATAD3BQ5T9A4 648 aa16.43■□□□□ 0.22
TPM1-228ENST00000560975 PIM3Q86V86 326 aa16.43■□□□□ 0.22
TPM1-228ENST00000560975 SLC22A9Q8IVM8 553 aa16.43■□□□□ 0.22
TPM1-228ENST00000560975 MFSD4AQ8N468 514 aa16.43■□□□□ 0.22
TPM1-228ENST00000560975 CHDHQ8NE62 594 aaPredicted RBP16.43■□□□□ 0.22
TPM1-228ENST00000560975 ADAMTS5Q9UNA0 930 aa16.43■□□□□ 0.22
TPM1-228ENST00000560975 GINS2Q9Y248 185 aa16.43■□□□□ 0.22
TPM1-228ENST00000560975 NDUFS2O75306 463 aa16.43■□□□□ 0.22
TPM1-228ENST00000560975 CDK14O94921 469 aa16.43■□□□□ 0.22
TPM1-228ENST00000560975 STAU1O95793 577 aaKnown RBP16.43■□□□□ 0.22
TPM1-228ENST00000560975 ALPLP05186 524 aa16.43■□□□□ 0.22
TPM1-228ENST00000560975 MAGP20916 626 aa16.43■□□□□ 0.22
TPM1-228ENST00000560975 BAG6P46379 1132 aa16.43■□□□□ 0.22
TPM1-228ENST00000560975 PLIN5Q00G26 463 aa16.43■□□□□ 0.22
TPM1-228ENST00000560975 BLOC1S3Q6QNY0 202 aa16.43■□□□□ 0.22
TPM1-228ENST00000560975 SCIMPQ6UWF3 145 aa16.43■□□□□ 0.22
TPM1-228ENST00000560975 KIAA2013Q8IYS2 634 aa16.43■□□□□ 0.22
TPM1-228ENST00000560975 S100ZQ8WXG8 99 aa16.43■□□□□ 0.22
TPM1-228ENST00000560975 MUL1Q969V5 352 aa16.43■□□□□ 0.22
TPM1-228ENST00000560975 SPC25Q9HBM1 224 aa16.43■□□□□ 0.22
TPM1-228ENST00000560975 ABCB10Q9NRK6 738 aa16.43■□□□□ 0.22
TPM1-228ENST00000560975 SNTG2Q9NY99 539 aa16.43■□□□□ 0.22
TPM1-228ENST00000560975 NCAM2O15394 837 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 LRIG2O94898 1065 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 POLD2P49005 469 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 PCSK7Q16549 785 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 ADPRMQ3LIE5 342 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 GLYATQ6IB77 296 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 TMEM207Q6UWW9 146 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 LGI2Q8N0V4 545 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 PTGR2Q8N8N7 351 aaPredicted RBP16.42■□□□□ 0.22
TPM1-228ENST00000560975 LEMD2Q8NC56 503 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 PAPD5Q8NDF8 572 aaKnown RBP16.42■□□□□ 0.22
TPM1-228ENST00000560975 OTUD5Q96G74 571 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 HSFY1Q96LI6 401 aa16.42■□□□□ 0.22
TPM1-228ENST00000560975 NSMCE2Q96MF7 247 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms