RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 SEMA7AO75326 666 aa17.69■□□□□ 0.42
TSPAN3-208ENST00000560514 CASP14P31944 242 aa17.69■□□□□ 0.42
TSPAN3-208ENST00000560514 GSCP56915 257 aaPredicted RBP17.69■□□□□ 0.42
TSPAN3-208ENST00000560514 IL10RBQ08334 325 aa17.69■□□□□ 0.42
TSPAN3-208ENST00000560514 ZNF235Q14590 738 aa17.69■□□□□ 0.42
TSPAN3-208ENST00000560514 LBRQ14739 615 aaKnown RBP17.69■□□□□ 0.42
TSPAN3-208ENST00000560514 SYCP1Q15431 976 aa17.69■□□□□ 0.42
TSPAN3-208ENST00000560514 DNAJC24Q6P3W2 148 aa17.69■□□□□ 0.42
TSPAN3-208ENST00000560514 LYSMD3Q7Z3D4 306 aa17.69■□□□□ 0.42
TSPAN3-208ENST00000560514 RASGRP3Q8IV61 690 aa17.69■□□□□ 0.42
TSPAN3-208ENST00000560514 GALNT6Q8NCL4 622 aa17.69■□□□□ 0.42
TSPAN3-208ENST00000560514 AP2M1Q96CW1 435 aa17.69■□□□□ 0.42
TSPAN3-208ENST00000560514 PSKH2Q96QS6 385 aa17.69■□□□□ 0.42
TSPAN3-208ENST00000560514 CASS4Q9NQ75 786 aa17.69■□□□□ 0.42
TSPAN3-208ENST00000560514 ZNHIT2Q9UHR6 403 aa17.69■□□□□ 0.42
TSPAN3-208ENST00000560514 CD84Q9UIB8 345 aa17.69■□□□□ 0.42
TSPAN3-208ENST00000560514 TNRC6AQ8NDV7 1962 aaKnown RBP17.68■□□□□ 0.42
TSPAN3-208ENST00000560514 HTRA2O43464 458 aaPredicted RBP17.68■□□□□ 0.42
TSPAN3-208ENST00000560514 PYGLP06737 847 aa17.68■□□□□ 0.42
TSPAN3-208ENST00000560514 FURINP09958 794 aa17.68■□□□□ 0.42
TSPAN3-208ENST00000560514 DPTQ07507 201 aa17.68■□□□□ 0.42
TSPAN3-208ENST00000560514 MIIPQ5JXC2 388 aa17.68■□□□□ 0.42
TSPAN3-208ENST00000560514 TMCO4Q5TGY1 634 aa17.68■□□□□ 0.42
TSPAN3-208ENST00000560514 ADAMTSL4Q6UY14 1074 aa17.68■□□□□ 0.42
TSPAN3-208ENST00000560514 USP45Q70EL2 814 aa17.68■□□□□ 0.42
TSPAN3-208ENST00000560514 NDUFAF2Q8N183 169 aa17.68■□□□□ 0.42
TSPAN3-208ENST00000560514 BBS5Q8N3I7 341 aa17.68■□□□□ 0.42
TSPAN3-208ENST00000560514 FNIP1Q8TF40 1166 aa17.68■□□□□ 0.42
TSPAN3-208ENST00000560514 SPOCK2Q92563 424 aa17.68■□□□□ 0.42
TSPAN3-208ENST00000560514 RNF31Q96EP0 1072 aa17.68■□□□□ 0.42
TSPAN3-208ENST00000560514 MCEEQ96PE7 176 aa17.68■□□□□ 0.42
TSPAN3-208ENST00000560514 HERPUD2Q9BSE4 406 aa17.68■□□□□ 0.42
TSPAN3-208ENST00000560514 CNPY3Q9BT09 278 aa17.68■□□□□ 0.42
TSPAN3-208ENST00000560514 CLSTN2Q9H4D0 955 aa17.68■□□□□ 0.42
TSPAN3-208ENST00000560514 DHX35Q9H5Z1 703 aaKnown RBP17.68■□□□□ 0.42
TSPAN3-208ENST00000560514 SEPT11Q9NVA2 429 aaKnown RBP17.68■□□□□ 0.42
TSPAN3-208ENST00000560514 TTC24A2A3L6 582 aaPredicted RBP17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 NPIPB15A6NHN6 443 aaPredicted RBP17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 EIF3CLB5ME19 914 aaKnown RBP17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 SNX2O60749 519 aa17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 CREG1O75629 220 aa17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 KIAA0754O94854 1291 aa17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 NDUFA10O95299 355 aa17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 UNGP13051 313 aaPredicted RBP17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 ZNF28P17035 718 aa17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 CHRNB2P17787 502 aa17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 LHCGRP22888 699 aa17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 HSPA9P38646 679 aaKnown RBP17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 PGDP52209 483 aa17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 HSP90AA4PQ58FG1 418 aa17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 ZNF787Q6DD87 383 aa17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 DCUN1D2Q6PH85 259 aa17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 CHST15Q7LFX5 561 aaPredicted RBP17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 MAMDC2Q7Z304 686 aaPredicted RBP17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 TMEM135Q86UB9 458 aa17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 TRIM74Q86UV6 250 aa17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 APLFQ8IW19 511 aaPredicted RBP17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 AVL9Q8NBF6 648 aa17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 SEC14L1Q92503 715 aa17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 EIF3CQ99613 913 aaKnown RBP17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 SLC29A3Q9BZD2 475 aa17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 VPS16Q9H269 839 aa17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 IGSF5Q9NSI5 407 aa17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 GPATCH2LQ9NWQ4 482 aa17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 MAP10Q9P2G4 905 aa17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 LNPEPQ9UIQ6 1025 aa17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 AP4E1Q9UPM8 1137 aa17.67■□□□□ 0.42
TSPAN3-208ENST00000560514 ITPR2Q14571 2701 aa17.66■□□□□ 0.42
TSPAN3-208ENST00000560514 A6NCN8 305 aa17.66■□□□□ 0.42
TSPAN3-208ENST00000560514 EML2O95834 649 aa17.66■□□□□ 0.42
TSPAN3-208ENST00000560514 MT-ND3P03897 115 aa17.66■□□□□ 0.42
TSPAN3-208ENST00000560514 PDGFAP04085 211 aa17.66■□□□□ 0.42
TSPAN3-208ENST00000560514 ANKRD34CP0C6C1 535 aa17.66■□□□□ 0.42
TSPAN3-208ENST00000560514 PTP4A2Q12974 167 aa17.66■□□□□ 0.42
TSPAN3-208ENST00000560514 SEMA5AQ13591 1074 aa17.66■□□□□ 0.42
TSPAN3-208ENST00000560514 IL11RAQ14626 422 aa17.66■□□□□ 0.42
TSPAN3-208ENST00000560514 IYDQ6PHW0 289 aa17.66■□□□□ 0.42
TSPAN3-208ENST00000560514 ARHGAP36Q6ZRI8 547 aa17.66■□□□□ 0.42
TSPAN3-208ENST00000560514 TSPAN33Q86UF1 283 aa17.66■□□□□ 0.42
TSPAN3-208ENST00000560514 PHF13Q86YI8 300 aaPredicted RBP17.66■□□□□ 0.42
TSPAN3-208ENST00000560514 CBARPQ8N350 705 aaPredicted RBP17.66■□□□□ 0.42
TSPAN3-208ENST00000560514 SCRN2Q96FV2 425 aa17.66■□□□□ 0.42
TSPAN3-208ENST00000560514 ZNF599Q96NL3 588 aa17.66■□□□□ 0.42
TSPAN3-208ENST00000560514 OR6C1Q96RD1 312 aa17.66■□□□□ 0.42
TSPAN3-208ENST00000560514 SLC25A23Q9BV35 468 aa17.66■□□□□ 0.42
TSPAN3-208ENST00000560514 ABCG8Q9H221 673 aa17.66■□□□□ 0.42
TSPAN3-208ENST00000560514 SIDT1Q9NXL6 827 aaKnown RBP17.66■□□□□ 0.42
TSPAN3-208ENST00000560514 PADI1Q9ULC6 663 aa17.66■□□□□ 0.42
TSPAN3-208ENST00000560514 MAP4K5Q9Y4K4 846 aa17.66■□□□□ 0.42
TSPAN3-208ENST00000560514 MED13Q9UHV7 2174 aa17.66■□□□□ 0.42
TSPAN3-208ENST00000560514 KIR2DS5A0A0G2JLQ3 304 aa17.65■□□□□ 0.42
TSPAN3-208ENST00000560514 A0A0G2JNG1 304 aa17.65■□□□□ 0.42
TSPAN3-208ENST00000560514 OR5K4A6NMS3 321 aa17.65■□□□□ 0.42
TSPAN3-208ENST00000560514 KIR2DS3K7RE56 304 aa17.65■□□□□ 0.42
TSPAN3-208ENST00000560514 DNAJB5O75953 348 aa17.65■□□□□ 0.42
TSPAN3-208ENST00000560514 RECKO95980 971 aa17.65■□□□□ 0.42
TSPAN3-208ENST00000560514 ERCC2P18074 760 aa17.65■□□□□ 0.42
TSPAN3-208ENST00000560514 SOX5P35711 763 aa17.65■□□□□ 0.42
TSPAN3-208ENST00000560514 GARSP41250 739 aaKnown RBP17.65■□□□□ 0.42
TSPAN3-208ENST00000560514 SLC10A7Q0GE19 358 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms