RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 ARFIP2P53365 341 aa12.63□□□□□ -0.39
USP3-213ENST00000559711 DNAJB13P59910 316 aa12.63□□□□□ -0.39
USP3-213ENST00000559711 PFKPQ01813 784 aa12.63□□□□□ -0.39
USP3-213ENST00000559711 PTSQ03393 145 aa12.63□□□□□ -0.39
USP3-213ENST00000559711 MESP2Q0VG99 397 aa12.63□□□□□ -0.39
USP3-213ENST00000559711 EIF4HQ15056 248 aaKnown RBP12.63□□□□□ -0.39
USP3-213ENST00000559711 COL13A1Q5TAT6 717 aaPredicted RBP12.63□□□□□ -0.39
USP3-213ENST00000559711 TAS2R42Q7RTR8 314 aa12.63□□□□□ -0.39
USP3-213ENST00000559711 SNX20Q7Z614 316 aa12.63□□□□□ -0.39
USP3-213ENST00000559711 PIWIL2Q8TC59 973 aaKnown RBP12.63□□□□□ -0.39
USP3-213ENST00000559711 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.63□□□□□ -0.392e-7■■■■□ 19.6
USP3-213ENST00000559711 MYADMQ96S97 322 aa12.63□□□□□ -0.39
USP3-213ENST00000559711 SIKE1Q9BRV8 207 aa12.63□□□□□ -0.39
USP3-213ENST00000559711 OSBPL1AQ9BXW6 950 aa12.63□□□□□ -0.39
USP3-213ENST00000559711 P2RY12Q9H244 342 aa12.63□□□□□ -0.39
USP3-213ENST00000559711 CLEC1BQ9P126 229 aa12.63□□□□□ -0.39
USP3-213ENST00000559711 OAS3Q9Y6K5 1087 aaKnown RBP12.63□□□□□ -0.39
USP3-213ENST00000559711 NUP210Q8TEM1 1887 aaPredicted RBP12.62□□□□□ -0.39
USP3-213ENST00000559711 ATG2AQ2TAZ0 1938 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 MYOFQ9NZM1 2061 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 A0A0G2JND7 137 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 AGAP14A8MT82 685 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 ANKRD65E5RJM6 399 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 OR1I1O60431 355 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 LEFTY1O75610 366 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 RHOBTB1O94844 696 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 PRAMEF1O95521 474 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 ESR1P03372 595 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 ATP5F1P24539 256 aaPredicted RBP12.62□□□□□ -0.39
USP3-213ENST00000559711 PPARGP37231 505 aaPredicted RBP12.62□□□□□ -0.39
USP3-213ENST00000559711 SPAM1P38567 509 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 ST8SIA6P61647 398 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 ASPHQ12797 758 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 PDAP1Q13442 181 aaKnown RBP12.62□□□□□ -0.39
USP3-213ENST00000559711 NFATC2Q13469 925 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 SETDB1Q15047 1291 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 SPRED3Q2MJR0 410 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 GPR33Q49SQ1 333 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 HSF5Q4G112 596 aaPredicted RBP12.62□□□□□ -0.39
USP3-213ENST00000559711 ARSIQ5FYB1 569 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 CTSL3PQ5NE16 218 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 LYPLAL1Q5VWZ2 237 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 LRRC66Q68CR7 880 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 FAM151BQ6UXP7 276 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 ISCA2Q86U28 154 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 SPNS2Q8IVW8 549 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 PHTF2Q8N3S3 785 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 PPP4R1Q8TF05 950 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 NXPE3Q969Y0 559 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 LRRC37BQ96QE4 947 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 TMEM120AQ9BXJ8 343 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 DRC3Q9H069 523 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 SYTL2Q9HCH5 934 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 LMCD1Q9NZU5 365 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 DKK3Q9UBP4 350 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 PLA2G4CQ9UP65 541 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 DNAJC16Q9Y2G8 782 aa12.62□□□□□ -0.39
USP3-213ENST00000559711 FNDC3AQ9Y2H6 1198 aaKnown RBP12.62□□□□□ -0.39
USP3-213ENST00000559711 GLYATL1P3A0A0U1RQE8 302 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 PRMT5O14744 637 aaPredicted RBP12.61□□□□□ -0.39
USP3-213ENST00000559711 UBOX5O94941 541 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 PYGLP06737 847 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 CTSLP07711 333 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 CHRM1P11229 460 aaPredicted RBP12.61□□□□□ -0.39
USP3-213ENST00000559711 CD1DP15813 335 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 TFEBP19484 476 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 ITGALP20701 1170 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 LHCGRP22888 699 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 RPS3P23396 243 aaKnown RBP eCLIP12.61□□□□□ -0.39
USP3-213ENST00000559711 SP100P23497 879 aaPredicted RBP12.61□□□□□ -0.39
USP3-213ENST00000559711 SKIV2L2P42285 1042 aaKnown RBP12.61□□□□□ -0.39
USP3-213ENST00000559711 RUNX3Q13761 415 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 SPDYAQ5MJ70 313 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 ZDHHC20Q5W0Z9 365 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 CES5AQ6NT32 575 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 SERPINA9Q86WD7 417 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 CPA6Q8N4T0 437 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 TXNDC5Q8NBS9 432 aaKnown RBP12.61□□□□□ -0.39
USP3-213ENST00000559711 GPR26Q8NDV2 337 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 RHEBL1Q8TAI7 183 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 KCNJ9Q92806 393 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 ELSPBP1Q96BH3 223 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 CCDC126Q96EE4 140 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 TTC1Q99614 292 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 PLA2G2FQ9BZM2 168 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 UNKQ9C0B0 810 aaKnown RBP12.61□□□□□ -0.39
USP3-213ENST00000559711 ASB8Q9H765 288 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 ACTR5Q9H9F9 607 aaPredicted RBP12.61□□□□□ -0.39
USP3-213ENST00000559711 B4GALT6Q9UBX8 382 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 IL36AQ9UHA7 158 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 SLC12A4Q9UP95 1085 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 MTF2Q9Y483 593 aaPredicted RBP12.61□□□□□ -0.39
USP3-213ENST00000559711 PCDHB1Q9Y5F3 818 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 A8MX80 341 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 GPR39O43194 453 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 VPS26AO75436 327 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 LAMP2P13473 410 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 TIMP2P16035 220 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 ALOX15P16050 662 aaPredicted RBP12.61□□□□□ -0.39
USP3-213ENST00000559711 ZNF30P17039 623 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms