RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 SREBF2Q12772 1141 aa4.45□□□□□ -1.7
CASC4-206ENST00000558847 MAD2L1Q13257 205 aaPredicted RBP4.45□□□□□ -1.7
CASC4-206ENST00000558847 KYNUQ16719 465 aa4.45□□□□□ -1.7
CASC4-206ENST00000558847 C2orf68Q2NKX9 166 aa4.45□□□□□ -1.7
CASC4-206ENST00000558847 MMEL1Q495T6 779 aa4.45□□□□□ -1.7
CASC4-206ENST00000558847 ZNF805Q5CZA5 627 aa4.45□□□□□ -1.7
CASC4-206ENST00000558847 FSCBQ5H9T9 825 aa4.45□□□□□ -1.7
CASC4-206ENST00000558847 DAB2IPQ5VWQ8 1189 aa4.45□□□□□ -1.7
CASC4-206ENST00000558847 FRG2Q64ET8 278 aa4.45□□□□□ -1.7
CASC4-206ENST00000558847 C11orf87Q6NUJ2 197 aa4.45□□□□□ -1.7
CASC4-206ENST00000558847 RPUSD3Q6P087 351 aaKnown RBP4.45□□□□□ -1.7
CASC4-206ENST00000558847 KCTD18Q6PI47 426 aaPredicted RBP4.45□□□□□ -1.7
CASC4-206ENST00000558847 PIP4P1Q86T03 277 aa4.45□□□□□ -1.7
CASC4-206ENST00000558847 PIM3Q86V86 326 aa4.45□□□□□ -1.7
CASC4-206ENST00000558847 TMEM199Q8N511 208 aa4.45□□□□□ -1.7
CASC4-206ENST00000558847 AADATQ8N5Z0 425 aa4.45□□□□□ -1.7
CASC4-206ENST00000558847 HJURPQ8NCD3 748 aaPredicted RBP4.45□□□□□ -1.7
CASC4-206ENST00000558847 ARRDC2Q8TBH0 407 aa4.45□□□□□ -1.7
CASC4-206ENST00000558847 RPL36ALQ969Q0 106 aaKnown RBP4.45□□□□□ -1.7
CASC4-206ENST00000558847 ZNF622Q969S3 477 aaKnown RBP eCLIP4.45□□□□□ -1.79e-11■□□□□ 9.1
CASC4-206ENST00000558847 ERGIC1Q969X5 290 aa4.45□□□□□ -1.7
CASC4-206ENST00000558847 SPATA17Q96L03 361 aa4.45□□□□□ -1.7
CASC4-206ENST00000558847 CEP295NLQ96MC4 621 aa4.45□□□□□ -1.7
CASC4-206ENST00000558847 SRSF8Q9BRL6 282 aaKnown RBP4.45□□□□□ -1.7
CASC4-206ENST00000558847 RTN4RQ9BZR6 473 aa4.45□□□□□ -1.7
CASC4-206ENST00000558847 OR10A4Q9H209 315 aa4.45□□□□□ -1.7
CASC4-206ENST00000558847 MMP27Q9H306 513 aa4.45□□□□□ -1.7
CASC4-206ENST00000558847 DENND2DQ9H6A0 471 aaPredicted RBP4.45□□□□□ -1.7
CASC4-206ENST00000558847 PPP1R3EQ9H7J1 279 aa4.45□□□□□ -1.7
CASC4-206ENST00000558847 EPB41L5Q9HCM4 733 aa4.45□□□□□ -1.7
CASC4-206ENST00000558847 POT1Q9NUX5 634 aa4.45□□□□□ -1.7
CASC4-206ENST00000558847 WSB2Q9NYS7 404 aaPredicted RBP4.45□□□□□ -1.7
CASC4-206ENST00000558847 BCCIPQ9P287 314 aaKnown RBP eCLIP4.45□□□□□ -1.7
CASC4-206ENST00000558847 OR14J1Q9UGF5 321 aa4.45□□□□□ -1.7
CASC4-206ENST00000558847 AMACRQ9UHK6 382 aa4.45□□□□□ -1.7
CASC4-206ENST00000558847 ATXN2Q99700 1313 aaKnown RBP4.45□□□□□ -1.7
CASC4-206ENST00000558847 RPS10-NUDT3A0A1W2PQS6 291 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 LNP1A1A4G5 178 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 C1orf226A1L170 272 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 UBE2CO00762 179 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 IPO8O15397 1037 aaKnown RBP4.44□□□□□ -1.7
CASC4-206ENST00000558847 SPRY3O43610 288 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 TBCAO75347 108 aaKnown RBP4.44□□□□□ -1.7
CASC4-206ENST00000558847 SOX30O94993 753 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 GH2P01242 217 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 HSP90AB1P08238 724 aaKnown RBP4.44□□□□□ -1.7
CASC4-206ENST00000558847 MYBL1P10243 752 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 VPREB1P12018 145 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 HNRNPH1P31943 449 aaKnown RBP4.44□□□□□ -1.7
CASC4-206ENST00000558847 STX2P32856 288 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 RPL3P39023 403 aaKnown RBP4.44□□□□□ -1.7
CASC4-206ENST00000558847 MSH2P43246 934 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 NUDT6P53370 316 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 CSNK2A1P68400 391 aaPredicted RBP4.44□□□□□ -1.7
CASC4-206ENST00000558847 UBXN2AP68543 259 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 ROR2Q01974 943 aaKnown RBP4.44□□□□□ -1.7
CASC4-206ENST00000558847 CXCL9Q07325 125 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 GRSF1Q12849 480 aaKnown RBP eCLIP4.44□□□□□ -1.7
CASC4-206ENST00000558847 TRAF2Q12933 501 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 PRTGQ2VWP7 1150 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 ZNF284Q2VY69 593 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 EFHC1Q5JVL4 640 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 DCST1Q5T197 706 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 LRIF1Q5T3J3 769 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 ERMARDQ5T6L9 678 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 LCE1AQ5T7P2 110 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 ADALQ6DHV7 355 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 DHRS7BQ6IAN0 325 aaPredicted RBP4.44□□□□□ -1.7
CASC4-206ENST00000558847 TAOK1Q7L7X3 1001 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 LINC00346Q8IVM7 164 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 SCYL3Q8IZE3 742 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 CSNK2A3Q8NEV1 391 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 TSPAN14Q8NG11 270 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 GPT2Q8TD30 523 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 DUSP19Q8WTR2 217 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 ADAMTS14Q8WXS8 1223 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 DNAAF4Q8WXU2 420 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 INPP5DQ92835 1189 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 SLC25A28Q96A46 364 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 ZBTB9Q96C00 473 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 PPP1R13BQ96KQ4 1090 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 APOLD1Q96LR9 279 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 KLHL4Q9C0H6 718 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 ESRP2Q9H6T0 727 aaKnown RBP4.44□□□□□ -1.7
CASC4-206ENST00000558847 C17orf75Q9HAS0 396 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 CLK4Q9HAZ1 481 aaKnown RBP4.44□□□□□ -1.7
CASC4-206ENST00000558847 CCDC177Q9NQR7 707 aaPredicted RBP4.44□□□□□ -1.7
CASC4-206ENST00000558847 ACSS1Q9NUB1 689 aaPredicted RBP4.44□□□□□ -1.7
CASC4-206ENST00000558847 HIF1ANQ9NWT6 349 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 STK39Q9UEW8 545 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 DBNLQ9UJU6 430 aaKnown RBP4.44□□□□□ -1.7
CASC4-206ENST00000558847 ANAPC2Q9UJX6 822 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 ACSL5Q9ULC5 683 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 PADI1Q9ULC6 663 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 FZD10Q9ULW2 581 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 ZNF148Q9UQR1 794 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 CLIC4Q9Y696 253 aa4.44□□□□□ -1.7
CASC4-206ENST00000558847 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.44□□□□□ -1.7
CASC4-206ENST00000558847 IGHV4-28A0A0C4DH34 117 aa4.43□□□□□ -1.7
CASC4-206ENST00000558847 FAM170AA1A519 330 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms