RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 SEMG2Q02383 582 aa14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 SEPT6Q14141 434 aa14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 CERCAMQ5T4B2 595 aa14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 RAET1GQ6H3X3 334 aa14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 CENPUQ71F23 418 aa14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 LMNTD2Q8IXW0 634 aa14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 IFT20Q8IY31 132 aa14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 MPP5Q8N3R9 675 aa14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 DEFB119Q8N690 84 aa14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 GPR26Q8NDV2 337 aa14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 KLK6Q92876 244 aa14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 BMFQ96LC9 184 aa14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 TBATAQ96M53 351 aa14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 SLC6A18Q96N87 628 aa14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 SMIM14Q96QK8 99 aa14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 TTC1Q99614 292 aa14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 APOOQ9BUR5 198 aa14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 RIOK2Q9BVS4 552 aaKnown RBP14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 SPATA16Q9BXB7 569 aa14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 TRIM31Q9BZY9 425 aa14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 ZCCHC2Q9C0B9 1178 aaKnown RBP14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 ARRDC1-AS1Q9H2J1 176 aa14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 IL26Q9NPH9 171 aa14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 GDF3Q9NR23 364 aa14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 GRHL1Q9NZI5 618 aa14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 VPS18Q9P253 973 aa14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 MTRF1LQ9UGC7 380 aaKnown RBP14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 PIEZO1Q92508 2521 aa14.04□□□□□ -0.16
SUPT16H-208ENST00000557652 ADAMTS9Q9P2N4 1935 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 SPTY2D1-AS1A0A0U1RR47 76 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 RAD51BO15315 384 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 TP73O15350 636 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 USP1O94782 785 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 SLU7O95391 586 aaKnown RBP14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 POLBP06746 335 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 THEGLP0DJG4 465 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 MGAT1P26572 445 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 MAOBP27338 520 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 GUCY2DQ02846 1103 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 ILF2Q12905 390 aaKnown RBP14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 FRG1Q14331 258 aaKnown RBP14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 INPP5AQ14642 412 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 NFATC4Q14934 902 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 CSRP2Q16527 193 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 TRIM61Q5EBN2 209 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 AARS2Q5JTZ9 985 aaKnown RBP14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 LDLRAP1Q5SW96 308 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 LYPLAL1Q5VWZ2 237 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 KIAA0930Q6ICG6 404 aaPredicted RBP14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 AFTPHQ6ULP2 937 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 CERS6Q6ZMG9 384 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 MACC1Q6ZN28 852 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 Q6ZSR6 202 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 SNX20Q7Z614 316 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 PTAR1Q7Z6K3 402 aaPredicted RBP14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 TMEM135Q86UB9 458 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 PHYKPLQ8IUZ5 450 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 SDR16C5Q8N3Y7 309 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 STAMBPL1Q96FJ0 436 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 CDKN2AIPNLQ96HQ2 116 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 HIC2Q96JB3 615 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 SIGLEC10Q96LC7 697 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 DPH5Q9H2P9 285 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 RMI1Q9H9A7 625 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 MBNL1Q9NR56 388 aaKnown RBP14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 TREX1Q9NSU2 369 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 TMEM74BQ9NUR3 256 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 SLC30A1Q9Y6M5 507 aa14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 GOLGA4Q13439 2230 aaKnown RBP14.03□□□□□ -0.16
SUPT16H-208ENST00000557652 ARHGEF17Q96PE2 2063 aaPredicted RBP14.02□□□□□ -0.16
SUPT16H-208ENST00000557652 KLHL33A6NCF5 533 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 POM121BA6NF01 834 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 F8W8V4 182 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 GOLGA8MH3BSY2 632 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 PFDN6O15212 129 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 VEGFDO43915 354 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 SRP72O76094 671 aaKnown RBP14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 PRAMEF1O95521 474 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 CER1O95813 267 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 SOD1P00441 154 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 SLC4A1P02730 911 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 PCCBP05166 539 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 TUBBP07437 444 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 ZNF883P0CG24 379 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 PGAM1P18669 254 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 CTSKP43235 329 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 NXPH1P58417 271 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 PRAMEP78395 509 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 XIAPP98170 497 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 CDK3Q00526 305 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 CACNG1Q06432 222 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 NFATC2Q13469 925 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 PTPRRQ15256 657 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 LPAL2Q16609 132 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 CASC4Q6P4E1 433 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 ZNF449Q6P9G9 518 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 PARGQ86W56 976 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 ZNF398Q8TD17 642 aa14.02□□□□□ -0.17
SUPT16H-208ENST00000557652 CALML6Q8TD86 181 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms