RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 DFNA5O60443 496 aa16.37■□□□□ 0.21
PCNX4-213ENST00000556907 CLDN7O95471 211 aa16.37■□□□□ 0.21
PCNX4-213ENST00000556907 HMGCLP35914 325 aa16.37■□□□□ 0.21
PCNX4-213ENST00000556907 PLA2G5P39877 138 aa16.37■□□□□ 0.21
PCNX4-213ENST00000556907 CHRNA4P43681 627 aa16.37■□□□□ 0.21
PCNX4-213ENST00000556907 RABIFP47224 123 aa16.37■□□□□ 0.21
PCNX4-213ENST00000556907 C21orf59P57076 290 aa16.37■□□□□ 0.21
PCNX4-213ENST00000556907 SPEM2Q0P670 501 aa16.37■□□□□ 0.21
PCNX4-213ENST00000556907 MTM1Q13496 603 aa16.37■□□□□ 0.21
PCNX4-213ENST00000556907 LAMB3Q13751 1172 aa16.37■□□□□ 0.21
PCNX4-213ENST00000556907 UBAP2Q5T6F2 1119 aaKnown RBP16.37■□□□□ 0.21
PCNX4-213ENST00000556907 TECPR1Q7Z6L1 1165 aa16.37■□□□□ 0.21
PCNX4-213ENST00000556907 TSPAN33Q86UF1 283 aa16.37■□□□□ 0.21
PCNX4-213ENST00000556907 ANKMY2Q8IV38 441 aa16.37■□□□□ 0.21
PCNX4-213ENST00000556907 IGDCC3Q8IVU1 814 aa16.37■□□□□ 0.21
PCNX4-213ENST00000556907 SLC25A41Q8N5S1 370 aa16.37■□□□□ 0.21
PCNX4-213ENST00000556907 TP53I13Q8NBR0 393 aaPredicted RBP16.37■□□□□ 0.21
PCNX4-213ENST00000556907 BRSK1Q8TDC3 778 aa16.37■□□□□ 0.21
PCNX4-213ENST00000556907 NUS1Q96E22 293 aa16.37■□□□□ 0.21
PCNX4-213ENST00000556907 DTD2Q96FN9 168 aa16.37■□□□□ 0.21
PCNX4-213ENST00000556907 KLHDC7BQ96G42 594 aa16.37■□□□□ 0.21
PCNX4-213ENST00000556907 SLC6A18Q96N87 628 aa16.37■□□□□ 0.21
PCNX4-213ENST00000556907 GPR63Q9BZJ6 419 aa16.37■□□□□ 0.21
PCNX4-213ENST00000556907 SAMD15Q9P1V8 674 aa16.37■□□□□ 0.21
PCNX4-213ENST00000556907 NFKBIL1Q9UBC1 381 aaPredicted RBP16.37■□□□□ 0.21
PCNX4-213ENST00000556907 SOX13Q9UN79 622 aa16.37■□□□□ 0.21
PCNX4-213ENST00000556907 ZNF711Q9Y462 761 aa16.37■□□□□ 0.21
PCNX4-213ENST00000556907 CACNA1EQ15878 2313 aa16.37■□□□□ 0.21
PCNX4-213ENST00000556907 ATXN2Q99700 1313 aaKnown RBP16.37■□□□□ 0.21
PCNX4-213ENST00000556907 TLR4O00206 839 aa16.36■□□□□ 0.21
PCNX4-213ENST00000556907 ACSL3O95573 720 aa16.36■□□□□ 0.21
PCNX4-213ENST00000556907 CRTAMO95727 393 aa16.36■□□□□ 0.21
PCNX4-213ENST00000556907 CFIP05156 583 aa16.36■□□□□ 0.21
PCNX4-213ENST00000556907 HOXC4P09017 264 aaPredicted RBP16.36■□□□□ 0.21
PCNX4-213ENST00000556907 PGAM1P18669 254 aa16.36■□□□□ 0.21
PCNX4-213ENST00000556907 SPINT3P49223 89 aa16.36■□□□□ 0.21
PCNX4-213ENST00000556907 SEMG2Q02383 582 aa16.36■□□□□ 0.21
PCNX4-213ENST00000556907 MSLNQ13421 630 aaPredicted RBP16.36■□□□□ 0.21
PCNX4-213ENST00000556907 KYNUQ16719 465 aa16.36■□□□□ 0.21
PCNX4-213ENST00000556907 WSCD2Q2TBF2 565 aa16.36■□□□□ 0.21
PCNX4-213ENST00000556907 ESRP1Q6NXG1 681 aaKnown RBP16.36■□□□□ 0.21
PCNX4-213ENST00000556907 HSD11B1LQ7Z5J1 315 aa16.36■□□□□ 0.21
PCNX4-213ENST00000556907 OXR1Q8N573 874 aa16.36■□□□□ 0.21
PCNX4-213ENST00000556907 DTX3LQ8TDB6 740 aa16.36■□□□□ 0.21
PCNX4-213ENST00000556907 ERVMER34-1Q9H9K5 563 aa16.36■□□□□ 0.21
PCNX4-213ENST00000556907 LRRC4CQ9HCJ2 640 aa16.36■□□□□ 0.21
PCNX4-213ENST00000556907 PIH1D1Q9NWS0 290 aaKnown RBP16.36■□□□□ 0.21
PCNX4-213ENST00000556907 ZC3H7BQ9UGR2 993 aaKnown RBP16.36■□□□□ 0.21
PCNX4-213ENST00000556907 COQ6Q9Y2Z9 468 aa16.36■□□□□ 0.21
PCNX4-213ENST00000556907 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.36■□□□□ 0.21
PCNX4-213ENST00000556907 DMDP11532 3685 aa16.36■□□□□ 0.21
PCNX4-213ENST00000556907 A0A087WUV0 522 aaPredicted RBP16.35■□□□□ 0.21
PCNX4-213ENST00000556907 C2orf81A6NN90 581 aa16.35■□□□□ 0.21
PCNX4-213ENST00000556907 ARHGAP33O14559 1287 aa16.35■□□□□ 0.21
PCNX4-213ENST00000556907 SASH3O75995 380 aa16.35■□□□□ 0.21
PCNX4-213ENST00000556907 GM2AP17900 193 aa16.35■□□□□ 0.21
PCNX4-213ENST00000556907 TGM1P22735 817 aa16.35■□□□□ 0.21
PCNX4-213ENST00000556907 PHBP35232 272 aa16.35■□□□□ 0.21
PCNX4-213ENST00000556907 CSNK1EP49674 416 aaKnown RBP16.35■□□□□ 0.21
PCNX4-213ENST00000556907 GPX6P59796 221 aa16.35■□□□□ 0.21
PCNX4-213ENST00000556907 DCDC1P59894 354 aa16.35■□□□□ 0.21
PCNX4-213ENST00000556907 PFN3P60673 137 aa16.35■□□□□ 0.21
PCNX4-213ENST00000556907 PTK2BQ14289 1009 aa16.35■□□□□ 0.21
PCNX4-213ENST00000556907 TAF1AQ15573 450 aaPredicted RBP16.35■□□□□ 0.21
PCNX4-213ENST00000556907 PCID2Q5JVF3 399 aa16.35■□□□□ 0.21
PCNX4-213ENST00000556907 HP1BP3Q5SSJ5 553 aaPredicted RBP16.35■□□□□ 0.21
PCNX4-213ENST00000556907 CERCAMQ5T4B2 595 aa16.35■□□□□ 0.21
PCNX4-213ENST00000556907 LRIG3Q6UXM1 1119 aa16.35■□□□□ 0.21
PCNX4-213ENST00000556907 GCNT7Q6ZNI0 430 aa16.35■□□□□ 0.21
PCNX4-213ENST00000556907 Q6ZVL8 140 aa16.35■□□□□ 0.21
PCNX4-213ENST00000556907 LYSMD3Q7Z3D4 306 aa16.35■□□□□ 0.21
PCNX4-213ENST00000556907 GLT6D1Q7Z4J2 308 aa16.35■□□□□ 0.21
PCNX4-213ENST00000556907 IQCKQ8N0W5 287 aa16.35■□□□□ 0.21
PCNX4-213ENST00000556907 PPHLN1Q8NEY8 458 aaKnown RBP16.35■□□□□ 0.21
PCNX4-213ENST00000556907 BLOC1S5Q8TDH9 187 aa16.35■□□□□ 0.21
PCNX4-213ENST00000556907 BMFQ96LC9 184 aa16.35■□□□□ 0.21
PCNX4-213ENST00000556907 KIFC1Q9BW19 673 aa16.35■□□□□ 0.21
PCNX4-213ENST00000556907 PLAC1Q9HBJ0 212 aa16.35■□□□□ 0.21
PCNX4-213ENST00000556907 PLAAQ9Y263 795 aa16.35■□□□□ 0.21
PCNX4-213ENST00000556907 ANKRD6Q9Y2G4 727 aa16.35■□□□□ 0.21
PCNX4-213ENST00000556907 TCAF1Q9Y4C2 921 aa16.35■□□□□ 0.21
PCNX4-213ENST00000556907 MAD1L1Q9Y6D9 718 aa16.35■□□□□ 0.21
PCNX4-213ENST00000556907 ZFHX2Q9C0A1 2572 aaPredicted RBP16.34■□□□□ 0.21
PCNX4-213ENST00000556907 RIF1Q5UIP0 2472 aaKnown RBP16.34■□□□□ 0.21
PCNX4-213ENST00000556907 FAM237BA0A1B0GVD1 139 aa16.34■□□□□ 0.21
PCNX4-213ENST00000556907 HEATR9A2RTY3 570 aa16.34■□□□□ 0.21
PCNX4-213ENST00000556907 RAD51BO15315 384 aa16.34■□□□□ 0.21
PCNX4-213ENST00000556907 USP1O94782 785 aa16.34■□□□□ 0.21
PCNX4-213ENST00000556907 C1SP09871 688 aa16.34■□□□□ 0.21
PCNX4-213ENST00000556907 THEGLP0DJG4 465 aa16.34■□□□□ 0.21
PCNX4-213ENST00000556907 STX2P32856 288 aa16.34■□□□□ 0.21
PCNX4-213ENST00000556907 TRIM23P36406 574 aa16.34■□□□□ 0.21
PCNX4-213ENST00000556907 ETV3P41162 512 aa16.34■□□□□ 0.21
PCNX4-213ENST00000556907 ATXN3P54252 364 aaPredicted RBP16.34■□□□□ 0.21
PCNX4-213ENST00000556907 EIF3BP55884 814 aaKnown RBP16.34■□□□□ 0.21
PCNX4-213ENST00000556907 IRX4P78413 519 aa16.34■□□□□ 0.21
PCNX4-213ENST00000556907 CRADDP78560 199 aa16.34■□□□□ 0.21
PCNX4-213ENST00000556907 FRG1Q14331 258 aaKnown RBP16.34■□□□□ 0.21
PCNX4-213ENST00000556907 SLC29A2Q14542 456 aa16.34■□□□□ 0.21
PCNX4-213ENST00000556907 CRYMQ14894 314 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms