RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 FASTKD3Q14CZ7 662 aaKnown RBP5.34□□□□□ -1.55
ATXN3-244ENST00000556898 SMAD1Q15797 465 aaKnown RBP5.34□□□□□ -1.55
ATXN3-244ENST00000556898 PARP6Q2NL67 630 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 POM121L1PQ3SYA9 428 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 FNDC3BQ53EP0 1204 aaKnown RBP5.34□□□□□ -1.55
ATXN3-244ENST00000556898 GLE1Q53GS7 698 aaKnown RBP5.34□□□□□ -1.55
ATXN3-244ENST00000556898 C2orf27AQ580R0 203 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 CARD16Q5EG05 197 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 LRRC73Q5JTD7 316 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 DENND2CQ68D51 928 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 KCTD11Q693B1 232 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 ITPRIPL1Q6GPH6 555 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 RETSATQ6NUM9 610 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 NCEH1Q6PIU2 408 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 DPY19L3Q6ZPD9 716 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 SYDE1Q6ZW31 735 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-244ENST00000556898 SRLQ86TD4 932 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 CAND1Q86VP6 1230 aaKnown RBP5.34□□□□□ -1.55
ATXN3-244ENST00000556898 ZSWIM9Q86XI8 627 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 CACUL1Q86Y37 369 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 CAMK1DQ8IU85 385 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 IGDCC3Q8IVU1 814 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 IFT20Q8IY31 132 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 PLD6Q8N2A8 252 aaKnown RBP5.34□□□□□ -1.55
ATXN3-244ENST00000556898 MPP5Q8N3R9 675 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 SLC25A41Q8N5S1 370 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 FAM181AQ8N9Y4 354 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 OR52K1Q8NGK4 314 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 WFIKKN2Q8TEU8 576 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 FRS2Q8WU20 508 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 NSMCE1Q8WV22 266 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 SEC14L1Q92503 715 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 PTPRN2Q92932 1015 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 FATE1Q969F0 183 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 LRRC45Q96CN5 670 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 IMP4Q96G21 291 aaKnown RBP5.34□□□□□ -1.55
ATXN3-244ENST00000556898 ZNF599Q96NL3 588 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 FANCD2OSQ96PS1 177 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 PSKH2Q96QS6 385 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 MGME1Q9BQP7 344 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 RAB17Q9H0T7 212 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 MIR1-1HGQ9H1L0 117 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 SLC25A51Q9H1U9 297 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 SLC6A17Q9H1V8 727 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 ARRDC1-AS1Q9H2J1 176 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 FAM114A2Q9NRY5 505 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 MBNL3Q9NUK0 354 aaKnown RBP5.34□□□□□ -1.55
ATXN3-244ENST00000556898 C2orf42Q9NWW7 574 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 DONSONQ9NYP3 566 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 WHRNQ9P202 907 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 HECAQ9UBI9 543 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-244ENST00000556898 FEZ2Q9UHY8 353 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-244ENST00000556898 SLC25A13Q9UJS0 675 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 TRHDEQ9UKU6 1024 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 HPCAL4Q9UM19 191 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 SLC27A6Q9Y2P4 619 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 MYOFQ9NZM1 2061 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 CCDC78A2IDD5 438 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 TARSL2A2RTX5 802 aaKnown RBP5.33□□□□□ -1.56
ATXN3-244ENST00000556898 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-244ENST00000556898 E7EVH7 732 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 K7ESF4 209 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 MTSS1O43312 755 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 BUD23O43709 281 aaKnown RBP5.33□□□□□ -1.56
ATXN3-244ENST00000556898 OPHN1O60890 802 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 AP2A1O95782 977 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 PRLP01236 227 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 APRTP07741 180 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 SRPRAP08240 638 aaKnown RBP5.33□□□□□ -1.56
ATXN3-244ENST00000556898 F7P08709 466 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-244ENST00000556898 DLDP09622 509 aaKnown RBP5.33□□□□□ -1.56
ATXN3-244ENST00000556898 ALPIP09923 528 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 ATXN1LP0C7T5 689 aaKnown RBP5.33□□□□□ -1.56
ATXN3-244ENST00000556898 PIRTP0C851 137 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 CTPS1P17812 591 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 TPSB2P20231 275 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 MGAT1P26572 445 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 SLC8A1P32418 973 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 NTF4P34130 210 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 ADRA1AP35348 466 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 ACTN2P35609 894 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 FDFT1P37268 417 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 GRIA2P42262 883 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 KIR2DL1P43626 348 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-244ENST00000556898 CCNHP51946 323 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-244ENST00000556898 WNT3AP56704 352 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 SESN2P58004 480 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-244ENST00000556898 CRADDP78560 199 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 CALCOCO2Q13137 446 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 SRSF5Q13243 272 aaKnown RBP5.33□□□□□ -1.56
ATXN3-244ENST00000556898 CAMK2GQ13555 558 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-244ENST00000556898 SEPT6Q14141 434 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 RFTN1Q14699 578 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-244ENST00000556898 PTPRCAPQ14761 206 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 SF3A2Q15428 464 aaKnown RBP5.33□□□□□ -1.56
ATXN3-244ENST00000556898 TPSAB1Q15661 275 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 MYLK3Q32MK0 819 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 BBS9Q3SYG4 887 aa5.33□□□□□ -1.56
ATXN3-244ENST00000556898 INO80DQ53TQ3 878 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-244ENST00000556898 TMEM196Q5HYL7 178 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms