RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 NEUROG3Q9Y4Z2 214 aa22.74■■□□□ 1.23
TDP1-216ENST00000556867 ACACBO00763 2458 aa22.74■■□□□ 1.23
TDP1-216ENST00000556867 FAM221BA6H8Z2 402 aa22.73■■□□□ 1.23
TDP1-216ENST00000556867 AURKAO14965 403 aa22.73■■□□□ 1.23
TDP1-216ENST00000556867 IVLP07476 585 aa22.73■■□□□ 1.23
TDP1-216ENST00000556867 GDF10P55107 478 aa22.73■■□□□ 1.23
TDP1-216ENST00000556867 OASLQ15646 514 aaKnown RBP22.73■■□□□ 1.23
TDP1-216ENST00000556867 CCDC157Q569K6 752 aa22.73■■□□□ 1.23
TDP1-216ENST00000556867 RANBP10Q6VN20 620 aa22.73■■□□□ 1.23
TDP1-216ENST00000556867 ARHGEF18Q6ZSZ5 1173 aa22.73■■□□□ 1.23
TDP1-216ENST00000556867 GKN2Q86XP6 184 aa22.73■■□□□ 1.23
TDP1-216ENST00000556867 REXO1L1PQ8IX06 675 aa22.73■■□□□ 1.23
TDP1-216ENST00000556867 TTC30BQ8N4P2 665 aa22.73■■□□□ 1.23
TDP1-216ENST00000556867 GPR26Q8NDV2 337 aa22.73■■□□□ 1.23
TDP1-216ENST00000556867 SCARF2Q96GP6 870 aaPredicted RBP22.73■■□□□ 1.23
TDP1-216ENST00000556867 MOSPD1Q9UJG1 213 aa22.73■■□□□ 1.23
TDP1-216ENST00000556867 KLK13Q9UKR3 277 aa22.73■■□□□ 1.23
TDP1-216ENST00000556867 CNOT6Q9ULM6 557 aaKnown RBP22.73■■□□□ 1.23
TDP1-216ENST00000556867 DOLKQ9UPQ8 538 aa22.73■■□□□ 1.23
TDP1-216ENST00000556867 KNTC1P50748 2209 aa22.72■■□□□ 1.23
TDP1-216ENST00000556867 FADS2P1A8MWK0 482 aa22.72■■□□□ 1.23
TDP1-216ENST00000556867 ZSCAN12O43309 604 aa22.72■■□□□ 1.23
TDP1-216ENST00000556867 AGTP01019 485 aa22.72■■□□□ 1.23
TDP1-216ENST00000556867 FUCA1P04066 466 aa22.72■■□□□ 1.23
TDP1-216ENST00000556867 HMGCLP35914 325 aa22.72■■□□□ 1.23
TDP1-216ENST00000556867 DUSP3P51452 185 aaPredicted RBP22.72■■□□□ 1.23
TDP1-216ENST00000556867 SIX1Q15475 284 aaPredicted RBP22.72■■□□□ 1.23
TDP1-216ENST00000556867 PARP6Q2NL67 630 aa22.72■■□□□ 1.23
TDP1-216ENST00000556867 DHRS13Q6UX07 377 aa22.72■■□□□ 1.23
TDP1-216ENST00000556867 TRIM74Q86UV6 250 aa22.72■■□□□ 1.23
TDP1-216ENST00000556867 SCG3Q8WXD2 468 aaKnown RBP22.72■■□□□ 1.23
TDP1-216ENST00000556867 TMEM168Q9H0V1 697 aa22.72■■□□□ 1.23
TDP1-216ENST00000556867 CARS2Q9HA77 564 aaKnown RBP22.72■■□□□ 1.23
TDP1-216ENST00000556867 ARHGEF17Q96PE2 2063 aaPredicted RBP22.72■■□□□ 1.23
TDP1-216ENST00000556867 ASXL3Q9C0F0 2248 aa22.72■■□□□ 1.23
TDP1-216ENST00000556867 INPP4BO15327 924 aa22.71■■□□□ 1.23
TDP1-216ENST00000556867 BPIP17213 487 aa22.71■■□□□ 1.23
TDP1-216ENST00000556867 STIP1P31948 543 aaKnown RBP22.71■■□□□ 1.23
TDP1-216ENST00000556867 TCEA2Q15560 299 aa22.71■■□□□ 1.23
TDP1-216ENST00000556867 SMAD1Q15797 465 aaKnown RBP22.71■■□□□ 1.23
TDP1-216ENST00000556867 P3H1Q32P28 736 aa22.71■■□□□ 1.23
TDP1-216ENST00000556867 ALS2CLQ60I27 953 aa22.71■■□□□ 1.23
TDP1-216ENST00000556867 PDPK2PQ6A1A2 396 aa22.71■■□□□ 1.23
TDP1-216ENST00000556867 DOK6Q6PKX4 331 aa22.71■■□□□ 1.23
TDP1-216ENST00000556867 TMPRSS7Q7RTY8 843 aa22.71■■□□□ 1.23
TDP1-216ENST00000556867 SLC35F3Q8IY50 421 aa22.71■■□□□ 1.23
TDP1-216ENST00000556867 TRAM1L1Q8N609 369 aa22.71■■□□□ 1.23
TDP1-216ENST00000556867 BLOC1S5Q8TDH9 187 aa22.71■■□□□ 1.23
TDP1-216ENST00000556867 PTCD2Q8WV60 388 aaKnown RBP22.71■■□□□ 1.23
TDP1-216ENST00000556867 C1orf54Q8WWF1 131 aa22.71■■□□□ 1.23
TDP1-216ENST00000556867 GLMNQ92990 594 aa22.71■■□□□ 1.23
TDP1-216ENST00000556867 PLEKHG4BQ96PX9 1271 aa22.71■■□□□ 1.23
TDP1-216ENST00000556867 ZSCAN5AQ9BUG6 496 aa22.71■■□□□ 1.23
TDP1-216ENST00000556867 SPATA16Q9BXB7 569 aa22.71■■□□□ 1.23
TDP1-216ENST00000556867 TRNAU1APQ9NX07 287 aaKnown RBP22.71■■□□□ 1.23
TDP1-216ENST00000556867 VPS18Q9P253 973 aa22.71■■□□□ 1.23
TDP1-216ENST00000556867 SUFUQ9UMX1 484 aa22.71■■□□□ 1.23
TDP1-216ENST00000556867 PLXNB3Q9ULL4 1909 aa22.7■■□□□ 1.23
TDP1-216ENST00000556867 METTL18O95568 372 aa22.7■■□□□ 1.22
TDP1-216ENST00000556867 MYF5P13349 255 aa22.7■■□□□ 1.22
TDP1-216ENST00000556867 POLD2P49005 469 aa22.7■■□□□ 1.22
TDP1-216ENST00000556867 RPIAP49247 311 aa22.7■■□□□ 1.22
TDP1-216ENST00000556867 NR0B2Q15466 257 aa22.7■■□□□ 1.22
TDP1-216ENST00000556867 ZNF569Q5MCW4 686 aa22.7■■□□□ 1.22
TDP1-216ENST00000556867 KCTD11Q693B1 232 aa22.7■■□□□ 1.22
TDP1-216ENST00000556867 GLT6D1Q7Z4J2 308 aa22.7■■□□□ 1.22
TDP1-216ENST00000556867 GALNT15Q8N3T1 639 aa22.7■■□□□ 1.22
TDP1-216ENST00000556867 MAIP1Q8WWC4 291 aa22.7■■□□□ 1.22
TDP1-216ENST00000556867 LRRC45Q96CN5 670 aa22.7■■□□□ 1.22
TDP1-216ENST00000556867 ZKSCAN5Q9Y2L8 839 aa22.7■■□□□ 1.22
TDP1-216ENST00000556867 TMEM98Q9Y2Y6 226 aa22.7■■□□□ 1.22
TDP1-216ENST00000556867 MSRB2Q9Y3D2 182 aa22.7■■□□□ 1.22
TDP1-216ENST00000556867 JRKLQ9Y4A0 524 aa22.7■■□□□ 1.22
TDP1-216ENST00000556867 FGGP02679 453 aa22.69■■□□□ 1.22
TDP1-216ENST00000556867 GP1BAP07359 652 aa22.69■■□□□ 1.22
TDP1-216ENST00000556867 GNPDA1P46926 289 aa22.69■■□□□ 1.22
TDP1-216ENST00000556867 OLIG2Q13516 323 aa22.69■■□□□ 1.22
TDP1-216ENST00000556867 CCNG2Q16589 344 aa22.69■■□□□ 1.22
TDP1-216ENST00000556867 ZDHHC20Q5W0Z9 365 aa22.69■■□□□ 1.22
TDP1-216ENST00000556867 DRICH1Q6PGQ1 229 aaPredicted RBP22.69■■□□□ 1.22
TDP1-216ENST00000556867 TAF8Q7Z7C8 310 aa22.69■■□□□ 1.22
TDP1-216ENST00000556867 ARL10Q8N8L6 244 aa22.69■■□□□ 1.22
TDP1-216ENST00000556867 GPBAR1Q8TDU6 330 aa22.69■■□□□ 1.22
TDP1-216ENST00000556867 TBL1YQ9BQ87 522 aa22.69■■□□□ 1.22
TDP1-216ENST00000556867 APOL2Q9BQE5 337 aa22.69■■□□□ 1.22
TDP1-216ENST00000556867 ARNT2Q9HBZ2 717 aa22.69■■□□□ 1.22
TDP1-216ENST00000556867 IL17CQ9P0M4 197 aa22.69■■□□□ 1.22
TDP1-216ENST00000556867 GPR34Q9UPC5 381 aa22.69■■□□□ 1.22
TDP1-216ENST00000556867 ZNF148Q9UQR1 794 aa22.69■■□□□ 1.22
TDP1-216ENST00000556867 OAS3Q9Y6K5 1087 aaKnown RBP22.69■■□□□ 1.22
TDP1-216ENST00000556867 RP1P56715 2156 aa22.69■■□□□ 1.22
TDP1-216ENST00000556867 ZFC3H1O60293 1989 aaKnown RBP22.69■■□□□ 1.22
TDP1-216ENST00000556867 ZNF106Q9H2Y7 1883 aaKnown RBP22.68■■□□□ 1.22
TDP1-216ENST00000556867 EME2A4GXA9 379 aaPredicted RBP22.68■■□□□ 1.22
TDP1-216ENST00000556867 CEP104O60308 925 aa22.68■■□□□ 1.22
TDP1-216ENST00000556867 CXCR5P32302 372 aa22.68■■□□□ 1.22
TDP1-216ENST00000556867 E2F1Q01094 437 aa22.68■■□□□ 1.22
TDP1-216ENST00000556867 ILF3Q12906 894 aaKnown RBP eCLIP22.68■■□□□ 1.22
TDP1-216ENST00000556867 DENND5AQ6IQ26 1287 aa22.68■■□□□ 1.22
TDP1-216ENST00000556867 GUSBP11Q6P575 273 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms