RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 GULP1Q9UBP9 304 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 TRIM10Q9UDY6 481 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 RALYQ9UKM9 306 aaKnown RBP10.28□□□□□ -0.76
SHMT2-224ENST00000556737 CNOT6Q9ULM6 557 aaKnown RBP10.28□□□□□ -0.76
SHMT2-224ENST00000556737 SUFUQ9UMX1 484 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 DOLKQ9UPQ8 538 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 LOC400499M0QZD8 3231 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 ZFC3H1O60293 1989 aaKnown RBP10.27□□□□□ -0.77
SHMT2-224ENST00000556737 A0A087WV48 116 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 C1orf232A0A0U1RR37 186 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 A0A1W2PQM1 296 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 PMS2P1A4D2B8 440 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 GRID2IPA4D2P6 1211 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 FADS2P1A8MWK0 482 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 ZNF500O60304 480 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-224ENST00000556737 TCEA3O75764 348 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 ZRANB2O95218 330 aaKnown RBP eCLIP10.27□□□□□ -0.77
SHMT2-224ENST00000556737 MT-CYBP00156 380 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-224ENST00000556737 PIRTP0C851 137 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 NFKB1P19838 968 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 CTNNA2P26232 953 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 PTPN7P35236 360 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 GNPDA1P46926 289 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 SPINT3P49223 89 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 GNG11P61952 73 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 HLTFQ14527 1009 aaKnown RBP eCLIP10.27□□□□□ -0.77
SHMT2-224ENST00000556737 NOMO1Q15155 1222 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 PCSK7Q16549 785 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 ISXQ2M1V0 245 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 C14orf28Q4W4Y0 310 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 ODF2Q5BJF6 829 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 CERCAMQ5T4B2 595 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 DOK6Q6PKX4 331 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 KDELC1Q6UW63 502 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 RBM44Q6ZP01 1051 aaKnown RBP10.27□□□□□ -0.77
SHMT2-224ENST00000556737 TAF8Q7Z7C8 310 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 NT5DC3Q86UY8 548 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 C17orf82Q86X59 251 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-224ENST00000556737 CCDC50Q8IVM0 306 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 RCOR2Q8IZ40 523 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 NRSN1Q8IZ57 195 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 SNIP1Q8TAD8 396 aaKnown RBP10.27□□□□□ -0.77
SHMT2-224ENST00000556737 TFB1MQ8WVM0 346 aaKnown RBP10.27□□□□□ -0.77
SHMT2-224ENST00000556737 SCG3Q8WXD2 468 aaKnown RBP10.27□□□□□ -0.77
SHMT2-224ENST00000556737 ALG3Q92685 438 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 P3H4Q92791 437 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 OXNAD1Q96HP4 312 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-224ENST00000556737 ALS2CR12Q96Q35 445 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 GORASP1Q9BQQ3 440 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 MLPHQ9BV36 600 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-224ENST00000556737 SUDS3Q9H7L9 328 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-224ENST00000556737 SPATS2LQ9NUQ6 558 aaKnown RBP10.27□□□□□ -0.77
SHMT2-224ENST00000556737 TRNAU1APQ9NX07 287 aaKnown RBP10.27□□□□□ -0.77
SHMT2-224ENST00000556737 NFKBIL1Q9UBC1 381 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-224ENST00000556737 MOSPD1Q9UJG1 213 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 ZNF711Q9Y462 761 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 PCDHA3Q9Y5H8 950 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 SPO11Q9Y5K1 396 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 ENTPD2Q9Y5L3 495 aa10.27□□□□□ -0.77
SHMT2-224ENST00000556737 OAS3Q9Y6K5 1087 aaKnown RBP10.27□□□□□ -0.77
SHMT2-224ENST00000556737 FAM208BQ5VWN6 2430 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 SMG1Q96Q15 3661 aaKnown RBP10.26□□□□□ -0.77
SHMT2-224ENST00000556737 ARHGEF17Q96PE2 2063 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-224ENST00000556737 D6RAR5 112 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 APOC4-APOC2K7ER74 178 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 INPP4BO15327 924 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 DNAJC6O75061 913 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 USP12O75317 370 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 DXOO77932 396 aaKnown RBP10.26□□□□□ -0.77
SHMT2-224ENST00000556737 NDST3O95803 873 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 APOC2P02655 101 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 MPOP05164 745 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 AK4P27144 223 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-224ENST00000556737 ADCY8P40145 1251 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 MAZP56270 477 aaKnown RBP10.26□□□□□ -0.77
SHMT2-224ENST00000556737 DCDC1P59894 354 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 CTBSQ01459 385 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 CDK18Q07002 472 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 ILF3Q12906 894 aaKnown RBP eCLIP10.26□□□□□ -0.77
SHMT2-224ENST00000556737 TBC1D25Q3MII6 688 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 PYCR3Q53H96 274 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 ZNF569Q5MCW4 686 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 AADACL2Q6P093 401 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 BZW1Q7L1Q6 419 aaKnown RBP10.26□□□□□ -0.77
SHMT2-224ENST00000556737 KDELC2Q7Z4H8 507 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 ZNF438Q7Z4V0 828 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 B3GNT8Q7Z7M8 397 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 ZC3H18Q86VM9 953 aaKnown RBP10.26□□□□□ -0.77
SHMT2-224ENST00000556737 ZNF567Q8N184 647 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 FAM46DQ8NEK8 389 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 WDR48Q8TAF3 677 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 ATXN7L3BQ96GX2 97 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 PRR11Q96HE9 360 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-224ENST00000556737 HIC2Q96JB3 615 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 CALR3Q96L12 384 aaKnown RBP10.26□□□□□ -0.77
SHMT2-224ENST00000556737 OR2M4Q96R27 311 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 HEMGNQ9BXL5 484 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 ADGRE3Q9BY15 652 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 GSDMCQ9BYG8 508 aa10.26□□□□□ -0.77
SHMT2-224ENST00000556737 CDH19Q9H159 772 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms