RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 RFXAPO00287 272 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 HDAC3O15379 428 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 PAPSS1O43252 624 aaPredicted RBP6.15□□□□□ -1.42
CPSF2-205ENST00000556622 B4GALT5O43286 388 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 SEMA7AO75326 666 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 ENTPD5O75356 428 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 TADA2AO75478 443 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 ANPEPP15144 967 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 FOSL2P15408 326 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 HOXB6P17509 224 aaKnown RBP6.15□□□□□ -1.42
CPSF2-205ENST00000556622 CCNCP24863 283 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 LRPAP1P30533 357 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 ADRA1BP35368 520 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 SEPHS1P49903 392 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 RPL14P50914 215 aaKnown RBP6.15□□□□□ -1.42
CPSF2-205ENST00000556622 LIMK2P53671 638 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 ALDH18A1P54886 795 aaKnown RBP6.15□□□□□ -1.42
CPSF2-205ENST00000556622 GEMP55040 296 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 TPI1P60174 286 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 CYP4F8P98187 520 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 ROR2Q01974 943 aaKnown RBP6.15□□□□□ -1.42
CPSF2-205ENST00000556622 KDSRQ06136 332 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 PPIDQ08752 370 aaKnown RBP6.15□□□□□ -1.42
CPSF2-205ENST00000556622 NIPAL4Q0D2K0 466 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 GALNT1Q10472 559 aaPredicted RBP6.15□□□□□ -1.42
CPSF2-205ENST00000556622 SF3A3Q12874 501 aaKnown RBP eCLIP6.15□□□□□ -1.42
CPSF2-205ENST00000556622 MSLNQ13421 630 aaPredicted RBP6.15□□□□□ -1.42
CPSF2-205ENST00000556622 ART3Q13508 389 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 ITGA9Q13797 1035 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 RCN2Q14257 317 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 C15orf59Q2T9L4 293 aaPredicted RBP6.15□□□□□ -1.42
CPSF2-205ENST00000556622 TEX44Q53QW1 395 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 XKR4Q5GH76 650 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 PCID2Q5JVF3 399 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 BRMS1LQ5PSV4 323 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 UBAP2Q5T6F2 1119 aaKnown RBP6.15□□□□□ -1.42
CPSF2-205ENST00000556622 N4BP2L1Q5TBK1 243 aaPredicted RBP6.15□□□□□ -1.42
CPSF2-205ENST00000556622 SEL1L3Q68CR1 1132 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 MBLAC2Q68D91 279 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 NCBP2-AS2Q69YL0 99 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 DCLRE1AQ6PJP8 1040 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 RFX8Q6ZV50 586 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 SLC24A5Q71RS6 500 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 PIWIL4Q7Z3Z4 852 aaKnown RBP6.15□□□□□ -1.42
CPSF2-205ENST00000556622 TMEM135Q86UB9 458 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 ZNF227Q86WZ6 799 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 MYLK4Q86YV6 388 aaPredicted RBP6.15□□□□□ -1.42
CPSF2-205ENST00000556622 SLC22A9Q8IVM8 553 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 ADGRF2Q8IZF7 708 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 THEM5Q8N1Q8 247 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 FBXW8Q8N3Y1 598 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 CNTD1Q8N815 330 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 NAT16Q8N8M0 369 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 KYQ8NBH2 561 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 B3GALNT2Q8NCR0 500 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 PPHLN1Q8NEY8 458 aaKnown RBP6.15□□□□□ -1.42
CPSF2-205ENST00000556622 ST13P5Q8NFI4 369 aaPredicted RBP6.15□□□□□ -1.42
CPSF2-205ENST00000556622 RNF139Q8WU17 664 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 LZICQ8WZA0 190 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 HDAC11Q96DB2 347 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 P2RY11Q96G91 374 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 CNDP1Q96KN2 507 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 LRGUKQ96M69 825 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 PEBP4Q96S96 227 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 RBBP8Q99708 897 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 NMUR2Q9GZQ4 415 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 WDCPQ9H6R7 721 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 NMRAL1Q9HBL8 299 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 ENTPD7Q9NQZ7 604 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 ARL8BQ9NVJ2 186 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 NMRK1Q9NWW6 199 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 UTP6Q9NYH9 597 aaKnown RBP6.15□□□□□ -1.42
CPSF2-205ENST00000556622 PLK2Q9NYY3 685 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 DTLQ9NZJ0 730 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 CNOT11Q9UKZ1 510 aaKnown RBP6.15□□□□□ -1.42
CPSF2-205ENST00000556622 CDH9Q9ULB4 789 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 RAP2CQ9Y3L5 183 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 KANSL1LA0AUZ9 987 aa6.14□□□□□ -1.43
CPSF2-205ENST00000556622 WDR27A2RRH5 827 aa6.14□□□□□ -1.43
CPSF2-205ENST00000556622 LCHNA4D1U4 455 aa6.14□□□□□ -1.43
CPSF2-205ENST00000556622 LINC01553A4QN01 128 aa6.14□□□□□ -1.43
CPSF2-205ENST00000556622 H0Y3Z8 333 aa6.14□□□□□ -1.43
CPSF2-205ENST00000556622 M0QYT0 321 aa6.14□□□□□ -1.43
CPSF2-205ENST00000556622 TPP1O14773 563 aa6.14□□□□□ -1.43
CPSF2-205ENST00000556622 NPHS1O60500 1241 aa6.14□□□□□ -1.43
CPSF2-205ENST00000556622 KCNH1O95259 989 aa6.14□□□□□ -1.43
CPSF2-205ENST00000556622 BAG2O95816 211 aa6.14□□□□□ -1.43
CPSF2-205ENST00000556622 RBP1P09455 135 aa6.14□□□□□ -1.43
CPSF2-205ENST00000556622 MSL3P1P0C860 447 aa6.14□□□□□ -1.43
CPSF2-205ENST00000556622 LCP1P13796 627 aa6.14□□□□□ -1.43
CPSF2-205ENST00000556622 DARSP14868 501 aaKnown RBP6.14□□□□□ -1.43
CPSF2-205ENST00000556622 PTPN1P18031 435 aaKnown RBP6.14□□□□□ -1.43
CPSF2-205ENST00000556622 NCF2P19878 526 aaPredicted RBP6.14□□□□□ -1.43
CPSF2-205ENST00000556622 TKTP29401 623 aaKnown RBP6.14□□□□□ -1.43
CPSF2-205ENST00000556622 RGS7P49802 495 aa6.14□□□□□ -1.43
CPSF2-205ENST00000556622 PAPOLAP51003 745 aaKnown RBP6.14□□□□□ -1.43
CPSF2-205ENST00000556622 RAB27AP51159 221 aa6.14□□□□□ -1.43
CPSF2-205ENST00000556622 GALK1P51570 392 aa6.14□□□□□ -1.43
CPSF2-205ENST00000556622 HTRA4P83105 476 aaPredicted RBP6.14□□□□□ -1.43
CPSF2-205ENST00000556622 MPP3Q13368 585 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms