RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 ULBP3Q9BZM4 244 aa18.84■□□□□ 0.61
SUPT16H-203ENST00000555752 ABCG8Q9H221 673 aa18.84■□□□□ 0.61
SUPT16H-203ENST00000555752 DHX35Q9H5Z1 703 aaKnown RBP18.84■□□□□ 0.61
SUPT16H-203ENST00000555752 SIDT1Q9NXL6 827 aaKnown RBP18.84■□□□□ 0.61
SUPT16H-203ENST00000555752 AP4E1Q9UPM8 1137 aa18.84■□□□□ 0.61
SUPT16H-203ENST00000555752 TTLL8A6PVC2 850 aa18.83■□□□□ 0.6
SUPT16H-203ENST00000555752 ERCC2P18074 760 aa18.83■□□□□ 0.6
SUPT16H-203ENST00000555752 JAM2P57087 298 aa18.83■□□□□ 0.6
SUPT16H-203ENST00000555752 RFTN1Q14699 578 aaPredicted RBP18.83■□□□□ 0.6
SUPT16H-203ENST00000555752 LBRQ14739 615 aaKnown RBP18.83■□□□□ 0.6
SUPT16H-203ENST00000555752 PPP1R15BQ5SWA1 713 aa18.83■□□□□ 0.6
SUPT16H-203ENST00000555752 DNAJC24Q6P3W2 148 aa18.83■□□□□ 0.6
SUPT16H-203ENST00000555752 TECPR1Q7Z6L1 1165 aa18.83■□□□□ 0.6
SUPT16H-203ENST00000555752 MLKLQ8NB16 471 aa18.83■□□□□ 0.6
SUPT16H-203ENST00000555752 GALNT6Q8NCL4 622 aa18.83■□□□□ 0.6
SUPT16H-203ENST00000555752 SPOCK2Q92563 424 aa18.83■□□□□ 0.6
SUPT16H-203ENST00000555752 PEBP4Q96S96 227 aa18.83■□□□□ 0.6
SUPT16H-203ENST00000555752 KCTD15Q96SI1 283 aaPredicted RBP18.83■□□□□ 0.6
SUPT16H-203ENST00000555752 NOD2Q9HC29 1040 aa18.83■□□□□ 0.6
SUPT16H-203ENST00000555752 SAMSN1Q9NSI8 373 aaKnown RBP18.83■□□□□ 0.6
SUPT16H-203ENST00000555752 TBC1D29Q9UFV1 150 aa18.83■□□□□ 0.6
SUPT16H-203ENST00000555752 ITPR2Q14571 2701 aa18.82■□□□□ 0.6
SUPT16H-203ENST00000555752 TEP1Q99973 2627 aaKnown RBP18.82■□□□□ 0.6
SUPT16H-203ENST00000555752 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.82■□□□□ 0.6
SUPT16H-203ENST00000555752 CDC14CA4D256 554 aa18.82■□□□□ 0.6
SUPT16H-203ENST00000555752 INPP4BO15327 924 aa18.82■□□□□ 0.6
SUPT16H-203ENST00000555752 KATNA1O75449 491 aa18.82■□□□□ 0.6
SUPT16H-203ENST00000555752 RFPL1O75677 317 aa18.82■□□□□ 0.6
SUPT16H-203ENST00000555752 CALB1P05937 261 aa18.82■□□□□ 0.6
SUPT16H-203ENST00000555752 COL8A1P27658 744 aa18.82■□□□□ 0.6
SUPT16H-203ENST00000555752 FOXM1Q08050 763 aa18.82■□□□□ 0.6
SUPT16H-203ENST00000555752 ZNF787Q6DD87 383 aa18.82■□□□□ 0.6
SUPT16H-203ENST00000555752 ADAMTSL4Q6UY14 1074 aa18.82■□□□□ 0.6
SUPT16H-203ENST00000555752 RFX8Q6ZV50 586 aa18.82■□□□□ 0.6
SUPT16H-203ENST00000555752 GALNT13Q8IUC8 556 aa18.82■□□□□ 0.6
SUPT16H-203ENST00000555752 GALNT11Q8NCW6 608 aa18.82■□□□□ 0.6
SUPT16H-203ENST00000555752 TBC1D10AQ9BXI6 508 aa18.82■□□□□ 0.6
SUPT16H-203ENST00000555752 FAM207AQ9NSI2 230 aaPredicted RBP18.82■□□□□ 0.6
SUPT16H-203ENST00000555752 KCTD5Q9NXV2 234 aa18.82■□□□□ 0.6
SUPT16H-203ENST00000555752 TAB2Q9NYJ8 693 aa18.82■□□□□ 0.6
SUPT16H-203ENST00000555752 POLHQ9Y253 713 aa18.82■□□□□ 0.6
SUPT16H-203ENST00000555752 PCDHB3Q9Y5E6 796 aa18.82■□□□□ 0.6
SUPT16H-203ENST00000555752 ENO4A6NNW6 628 aa18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 PSMD11O00231 422 aa18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 DAPK3O43293 454 aa18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 SOCS5O75159 536 aa18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 CYP2A6P11509 494 aaPredicted RBP18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 HTR7P34969 479 aa18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 GFERP55789 205 aa18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 MAXP61244 160 aa18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 DPTQ07507 201 aa18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 MAP7Q14244 749 aa18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 DPCR1Q3MIW9 517 aa18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 TMCO4Q5TGY1 634 aa18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 C6orf15Q6UXA7 325 aaPredicted RBP18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 ARFGAP1Q8N6T3 406 aa18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 EFCAB3Q8N7B9 438 aa18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 CPT1CQ8TCG5 803 aa18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 AP2M1Q96CW1 435 aa18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 SCRN2Q96FV2 425 aa18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 ELMO2Q96JJ3 720 aa18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 SNRNP25Q9BV90 132 aaKnown RBP18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 TRIM55Q9BYV6 548 aa18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 SARS2Q9NP81 518 aaKnown RBP18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 SEPT11Q9NVA2 429 aaKnown RBP18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 DONSONQ9NYP3 566 aa18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 PCSK1NQ9UHG2 260 aa18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 PHTF1Q9UMS5 762 aa18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 KCNK6Q9Y257 313 aa18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 OAS3Q9Y6K5 1087 aaKnown RBP18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 SHANK1Q9Y566 2161 aa18.81■□□□□ 0.6
SUPT16H-203ENST00000555752 ZNF106Q9H2Y7 1883 aaKnown RBP18.8■□□□□ 0.6
SUPT16H-203ENST00000555752 PEX11BO96011 259 aa18.8■□□□□ 0.6
SUPT16H-203ENST00000555752 ATP1A1P05023 1023 aaKnown RBP18.8■□□□□ 0.6
SUPT16H-203ENST00000555752 RENBPP51606 427 aa18.8■□□□□ 0.6
SUPT16H-203ENST00000555752 PMS2P54278 862 aa18.8■□□□□ 0.6
SUPT16H-203ENST00000555752 SH3BP2P78314 561 aa18.8■□□□□ 0.6
SUPT16H-203ENST00000555752 ZNF235Q14590 738 aa18.8■□□□□ 0.6
SUPT16H-203ENST00000555752 NADK2Q4G0N4 442 aa18.8■□□□□ 0.6
SUPT16H-203ENST00000555752 PPP6R3Q5H9R7 873 aaPredicted RBP18.8■□□□□ 0.6
SUPT16H-203ENST00000555752 LRRC66Q68CR7 880 aa18.8■□□□□ 0.6
SUPT16H-203ENST00000555752 IYDQ6PHW0 289 aa18.8■□□□□ 0.6
SUPT16H-203ENST00000555752 CHST15Q7LFX5 561 aaPredicted RBP18.8■□□□□ 0.6
SUPT16H-203ENST00000555752 MCCC1Q96RQ3 725 aaPredicted RBP18.8■□□□□ 0.6
SUPT16H-203ENST00000555752 NUDCD1Q96RS6 583 aa18.8■□□□□ 0.6
SUPT16H-203ENST00000555752 TWSG1Q9GZX9 223 aa18.8■□□□□ 0.6
SUPT16H-203ENST00000555752 RCOR3Q9P2K3 495 aaPredicted RBP18.8■□□□□ 0.6
SUPT16H-203ENST00000555752 ZNHIT2Q9UHR6 403 aa18.8■□□□□ 0.6
SUPT16H-203ENST00000555752 RP1L1Q8IWN7 2480 aaPredicted RBP18.79■□□□□ 0.6
SUPT16H-203ENST00000555752 ANKRD62A6NC57 917 aa18.79■□□□□ 0.6
SUPT16H-203ENST00000555752 A6NCN8 305 aa18.79■□□□□ 0.6
SUPT16H-203ENST00000555752 SNX2O60749 519 aa18.79■□□□□ 0.6
SUPT16H-203ENST00000555752 KIAA0754O94854 1291 aa18.79■□□□□ 0.6
SUPT16H-203ENST00000555752 PGLSO95336 258 aa18.79■□□□□ 0.6
SUPT16H-203ENST00000555752 ASMTLO95671 621 aa18.79■□□□□ 0.6
SUPT16H-203ENST00000555752 PDHA1P08559 390 aa18.79■□□□□ 0.6
SUPT16H-203ENST00000555752 ACP5P13686 325 aa18.79■□□□□ 0.6
SUPT16H-203ENST00000555752 NOP2P46087 812 aaKnown RBP18.79■□□□□ 0.6
SUPT16H-203ENST00000555752 LRP8Q14114 963 aa18.79■□□□□ 0.6
SUPT16H-203ENST00000555752 TCP11X2Q5H9J9 407 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms