RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 SLC35B2Q8TB61 432 aa13.65□□□□□ -0.22
SHMT2-219ENST00000555563 HIC2Q96JB3 615 aa13.65□□□□□ -0.22
SHMT2-219ENST00000555563 GPR63Q9BZJ6 419 aa13.65□□□□□ -0.22
SHMT2-219ENST00000555563 TMEM168Q9H0V1 697 aa13.65□□□□□ -0.22
SHMT2-219ENST00000555563 FAM83DQ9H4H8 585 aa13.65□□□□□ -0.22
SHMT2-219ENST00000555563 CARS2Q9HA77 564 aaKnown RBP13.65□□□□□ -0.22
SHMT2-219ENST00000555563 EVA1BQ9NVM1 165 aa13.65□□□□□ -0.22
SHMT2-219ENST00000555563 NCKIPSDQ9NZQ3 722 aa13.65□□□□□ -0.22
SHMT2-219ENST00000555563 SIRPGQ9P1W8 387 aa13.65□□□□□ -0.22
SHMT2-219ENST00000555563 RALYQ9UKM9 306 aaKnown RBP13.65□□□□□ -0.22
SHMT2-219ENST00000555563 SUFUQ9UMX1 484 aa13.65□□□□□ -0.22
SHMT2-219ENST00000555563 SLC17A4Q9Y2C5 497 aa13.65□□□□□ -0.22
SHMT2-219ENST00000555563 CHD8Q9HCK8 2581 aa13.65□□□□□ -0.22
SHMT2-219ENST00000555563 PLXNB3Q9ULL4 1909 aa13.64□□□□□ -0.23
SHMT2-219ENST00000555563 RGSL1A5PLK6 1076 aa13.64□□□□□ -0.23
SHMT2-219ENST00000555563 ANXA9O76027 345 aa13.64□□□□□ -0.23
SHMT2-219ENST00000555563 IVLP07476 585 aa13.64□□□□□ -0.23
SHMT2-219ENST00000555563 HLA-DPA1P20036 260 aa13.64□□□□□ -0.23
SHMT2-219ENST00000555563 TNNT3P45378 269 aaPredicted RBP13.64□□□□□ -0.23
SHMT2-219ENST00000555563 GNPDA1P46926 289 aa13.64□□□□□ -0.23
SHMT2-219ENST00000555563 POLD2P49005 469 aa13.64□□□□□ -0.23
SHMT2-219ENST00000555563 DUSP3P51452 185 aaPredicted RBP13.64□□□□□ -0.23
SHMT2-219ENST00000555563 GEMP55040 296 aa13.64□□□□□ -0.23
SHMT2-219ENST00000555563 RPS6KA1Q15418 735 aa13.64□□□□□ -0.23
SHMT2-219ENST00000555563 NR0B2Q15466 257 aa13.64□□□□□ -0.23
SHMT2-219ENST00000555563 LVRNQ6Q4G3 990 aa13.64□□□□□ -0.23
SHMT2-219ENST00000555563 TMC3Q7Z5M5 1100 aa13.64□□□□□ -0.23
SHMT2-219ENST00000555563 TAF8Q7Z7C8 310 aa13.64□□□□□ -0.23
SHMT2-219ENST00000555563 GKN2Q86XP6 184 aa13.64□□□□□ -0.23
SHMT2-219ENST00000555563 SDR16C5Q8N3Y7 309 aa13.64□□□□□ -0.23
SHMT2-219ENST00000555563 ARL10Q8N8L6 244 aa13.64□□□□□ -0.23
SHMT2-219ENST00000555563 GPR26Q8NDV2 337 aa13.64□□□□□ -0.23
SHMT2-219ENST00000555563 IFI44Q8TCB0 444 aa13.64□□□□□ -0.23
SHMT2-219ENST00000555563 ATG4AQ8WYN0 398 aa13.64□□□□□ -0.23
SHMT2-219ENST00000555563 COX14Q96I36 57 aa13.64□□□□□ -0.23
SHMT2-219ENST00000555563 SRPK1Q96SB4 655 aaKnown RBP13.64□□□□□ -0.23
SHMT2-219ENST00000555563 FICDQ9BVA6 458 aa13.64□□□□□ -0.23
SHMT2-219ENST00000555563 NFKBIL1Q9UBC1 381 aaPredicted RBP13.64□□□□□ -0.23
SHMT2-219ENST00000555563 GPR34Q9UPC5 381 aa13.64□□□□□ -0.23
SHMT2-219ENST00000555563 TMEM98Q9Y2Y6 226 aa13.64□□□□□ -0.23
SHMT2-219ENST00000555563 SPEGQ15772 3267 aa13.64□□□□□ -0.23
SHMT2-219ENST00000555563 CPED1A4D0V7 1026 aa13.63□□□□□ -0.23
SHMT2-219ENST00000555563 EME2A4GXA9 379 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-219ENST00000555563 ZNF189O75820 626 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-219ENST00000555563 AGTP01019 485 aa13.63□□□□□ -0.23
SHMT2-219ENST00000555563 FGF1P05230 155 aa13.63□□□□□ -0.23
SHMT2-219ENST00000555563 GP1BAP07359 652 aa13.63□□□□□ -0.23
SHMT2-219ENST00000555563 BPIP17213 487 aa13.63□□□□□ -0.23
SHMT2-219ENST00000555563 GDF10P55107 478 aa13.63□□□□□ -0.23
SHMT2-219ENST00000555563 INSM1Q01101 510 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-219ENST00000555563 OLIG2Q13516 323 aa13.63□□□□□ -0.23
SHMT2-219ENST00000555563 EFL1Q7Z2Z2 1120 aaKnown RBP13.63□□□□□ -0.23
SHMT2-219ENST00000555563 TMPRSS12Q86WS5 348 aa13.63□□□□□ -0.23
SHMT2-219ENST00000555563 SLC13A5Q86YT5 568 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-219ENST00000555563 TTC30BQ8N4P2 665 aa13.63□□□□□ -0.23
SHMT2-219ENST00000555563 FAM71DQ8N9W8 422 aa13.63□□□□□ -0.23
SHMT2-219ENST00000555563 BLOC1S5Q8TDH9 187 aa13.63□□□□□ -0.23
SHMT2-219ENST00000555563 UBE2Q2Q8WVN8 375 aa13.63□□□□□ -0.23
SHMT2-219ENST00000555563 SCG3Q8WXD2 468 aaKnown RBP13.63□□□□□ -0.23
SHMT2-219ENST00000555563 GLMNQ92990 594 aa13.63□□□□□ -0.23
SHMT2-219ENST00000555563 SCARF2Q96GP6 870 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-219ENST00000555563 OR2M4Q96R27 311 aa13.63□□□□□ -0.23
SHMT2-219ENST00000555563 APOL2Q9BQE5 337 aa13.63□□□□□ -0.23
SHMT2-219ENST00000555563 TMEM121Q9BTD3 319 aa13.63□□□□□ -0.23
SHMT2-219ENST00000555563 SPATA16Q9BXB7 569 aa13.63□□□□□ -0.23
SHMT2-219ENST00000555563 CARD9Q9H257 536 aa13.63□□□□□ -0.23
SHMT2-219ENST00000555563 ZMIZ1Q9ULJ6 1067 aa13.63□□□□□ -0.23
SHMT2-219ENST00000555563 CNOT6Q9ULM6 557 aaKnown RBP13.63□□□□□ -0.23
SHMT2-219ENST00000555563 OAS3Q9Y6K5 1087 aaKnown RBP13.63□□□□□ -0.23
SHMT2-219ENST00000555563 C5orf60A6NFR6 353 aa13.62□□□□□ -0.23
SHMT2-219ENST00000555563 ATP1A1P05023 1023 aaKnown RBP13.62□□□□□ -0.23
SHMT2-219ENST00000555563 ADRA1AP35348 466 aa13.62□□□□□ -0.23
SHMT2-219ENST00000555563 HMGCLP35914 325 aa13.62□□□□□ -0.23
SHMT2-219ENST00000555563 RPIAP49247 311 aa13.62□□□□□ -0.23
SHMT2-219ENST00000555563 E2F1Q01094 437 aa13.62□□□□□ -0.23
SHMT2-219ENST00000555563 ILF3Q12906 894 aaKnown RBP eCLIP13.62□□□□□ -0.23
SHMT2-219ENST00000555563 PRPSAP1Q14558 356 aa13.62□□□□□ -0.23
SHMT2-219ENST00000555563 ZNF569Q5MCW4 686 aa13.62□□□□□ -0.23
SHMT2-219ENST00000555563 PERM1Q5SV97 790 aa13.62□□□□□ -0.23
SHMT2-219ENST00000555563 ARHGEF18Q6ZSZ5 1173 aa13.62□□□□□ -0.23
SHMT2-219ENST00000555563 MARK2Q7KZI7 788 aaKnown RBP13.62□□□□□ -0.23
SHMT2-219ENST00000555563 GLT6D1Q7Z4J2 308 aa13.62□□□□□ -0.23
SHMT2-219ENST00000555563 NRROSQ86YC3 692 aa13.62□□□□□ -0.23
SHMT2-219ENST00000555563 SFTPA2Q8IWL1 248 aa13.62□□□□□ -0.23
SHMT2-219ENST00000555563 KDF1Q8NAX2 398 aaPredicted RBP13.62□□□□□ -0.23
SHMT2-219ENST00000555563 TRIM58Q8NG06 486 aa13.62□□□□□ -0.23
SHMT2-219ENST00000555563 GPBAR1Q8TDU6 330 aa13.62□□□□□ -0.23
SHMT2-219ENST00000555563 NAT6Q93015 286 aa13.62□□□□□ -0.23
SHMT2-219ENST00000555563 TLR10Q9BXR5 811 aa13.62□□□□□ -0.23
SHMT2-219ENST00000555563 CDH19Q9H159 772 aa13.62□□□□□ -0.23
SHMT2-219ENST00000555563 KCNF1Q9H3M0 494 aa13.62□□□□□ -0.23
SHMT2-219ENST00000555563 TRABDQ9H4I3 376 aa13.62□□□□□ -0.23
SHMT2-219ENST00000555563 BPIFA1Q9NP55 256 aa13.62□□□□□ -0.23
SHMT2-219ENST00000555563 RAD18Q9NS91 495 aa13.62□□□□□ -0.23
SHMT2-219ENST00000555563 TRNAU1APQ9NX07 287 aaKnown RBP13.62□□□□□ -0.23
SHMT2-219ENST00000555563 HACD3Q9P035 362 aa13.62□□□□□ -0.23
SHMT2-219ENST00000555563 GULP1Q9UBP9 304 aa13.62□□□□□ -0.23
SHMT2-219ENST00000555563 PADI4Q9UM07 663 aa13.62□□□□□ -0.23
SHMT2-219ENST00000555563 AAR2Q9Y312 384 aaKnown RBP13.62□□□□□ -0.23
SHMT2-219ENST00000555563 ST14Q9Y5Y6 855 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms