RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 ZNF354BQ96LW1 612 aa2.79□□□□□ -1.96
SRP54-207ENST00000555535 COG8Q96MW5 612 aa2.79□□□□□ -1.96
SRP54-207ENST00000555535 PAGR1Q9BTK6 254 aa2.79□□□□□ -1.96
SRP54-207ENST00000555535 HEMGNQ9BXL5 484 aa2.79□□□□□ -1.96
SRP54-207ENST00000555535 TKTL2Q9H0I9 626 aa2.79□□□□□ -1.96
SRP54-207ENST00000555535 PPP1R3EQ9H7J1 279 aa2.79□□□□□ -1.96
SRP54-207ENST00000555535 NOD2Q9HC29 1040 aa2.79□□□□□ -1.96
SRP54-207ENST00000555535 GPR108Q9NPR9 543 aa2.79□□□□□ -1.96
SRP54-207ENST00000555535 IL1RAPL1Q9NZN1 696 aa2.79□□□□□ -1.96
SRP54-207ENST00000555535 ZNF821O75541 412 aaPredicted RBP2.78□□□□□ -1.96
SRP54-207ENST00000555535 CAVIN2O95810 425 aa2.78□□□□□ -1.96
SRP54-207ENST00000555535 MT-CYBP00156 380 aaPredicted RBP2.78□□□□□ -1.96
SRP54-207ENST00000555535 IGHV4-39P01824 125 aa2.78□□□□□ -1.96
SRP54-207ENST00000555535 CD48P09326 243 aa2.78□□□□□ -1.96
SRP54-207ENST00000555535 PRSS56P0CW18 603 aa2.78□□□□□ -1.96
SRP54-207ENST00000555535 GNB3P16520 340 aa2.78□□□□□ -1.96
SRP54-207ENST00000555535 TLX1P31314 330 aaPredicted RBP2.78□□□□□ -1.96
SRP54-207ENST00000555535 MMP14P50281 582 aa2.78□□□□□ -1.96
SRP54-207ENST00000555535 RAD23BP54727 409 aa2.78□□□□□ -1.96
SRP54-207ENST00000555535 TBL3Q12788 808 aaKnown RBP2.78□□□□□ -1.96
SRP54-207ENST00000555535 PEX6Q13608 980 aa2.78□□□□□ -1.96
SRP54-207ENST00000555535 VEPH1Q14D04 833 aa2.78□□□□□ -1.96
SRP54-207ENST00000555535 WDR38Q5JTN6 314 aa2.78□□□□□ -1.96
SRP54-207ENST00000555535 ZNF280DQ6N043 979 aa2.78□□□□□ -1.96
SRP54-207ENST00000555535 ADGRG6Q86SQ4 1221 aa2.78□□□□□ -1.96
SRP54-207ENST00000555535 TADA2BQ86TJ2 420 aa2.78□□□□□ -1.96
SRP54-207ENST00000555535 TDRPQ86YL5 185 aa2.78□□□□□ -1.96
SRP54-207ENST00000555535 SPICE1Q8N0Z3 855 aa2.78□□□□□ -1.96
SRP54-207ENST00000555535 MYCT1Q8N699 235 aa2.78□□□□□ -1.96
SRP54-207ENST00000555535 OR5R1Q8NH85 324 aa2.78□□□□□ -1.96
SRP54-207ENST00000555535 FCAMRQ8WWV6 532 aa2.78□□□□□ -1.96
SRP54-207ENST00000555535 PIGTQ969N2 578 aa2.78□□□□□ -1.96
SRP54-207ENST00000555535 ELP4Q96EB1 424 aa2.78□□□□□ -1.96
SRP54-207ENST00000555535 NEUROD6Q96NK8 337 aa2.78□□□□□ -1.96
SRP54-207ENST00000555535 BBS4Q96RK4 519 aa2.78□□□□□ -1.96
SRP54-207ENST00000555535 TFB2MQ9H5Q4 396 aaKnown RBP2.78□□□□□ -1.96
SRP54-207ENST00000555535 SLC52A3Q9NQ40 469 aa2.78□□□□□ -1.96
SRP54-207ENST00000555535 HINT3Q9NQE9 182 aaKnown RBP2.78□□□□□ -1.96
SRP54-207ENST00000555535 LOXL2Q9Y4K0 774 aa2.78□□□□□ -1.96
SRP54-207ENST00000555535 IGLV5-45A0A087WSX0 123 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 A0A087X002 238 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 A0A0G2JLW4 131 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 PRKNO60260 465 aaPredicted RBP2.77□□□□□ -1.97
SRP54-207ENST00000555535 FTCDO95954 541 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 URODP06132 367 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 KRTAP1-4P0C5Y4 121 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 ERVK-10P10266 1014 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 CBLP22681 906 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 RRM1P23921 792 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 CCR10P46092 362 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 EFNB1P98172 346 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 RUNX1T1Q06455 604 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 ANKRD1Q15327 319 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 TCTN1Q2MV58 587 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 DUS1LQ6P1R4 473 aaKnown RBP2.77□□□□□ -1.97
SRP54-207ENST00000555535 HAPLN4Q86UW8 402 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 PCDH20Q8N6Y1 951 aaKnown RBP2.77□□□□□ -1.97
SRP54-207ENST00000555535 STPG4Q8N801 248 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 USP38Q8NB14 1042 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 OR52I2Q8NH67 350 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 HUS1BQ8NHY5 278 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 CYYR1Q96J86 154 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 SH3GL2Q99962 352 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 LBHD1Q9BQE6 289 aaPredicted RBP2.77□□□□□ -1.97
SRP54-207ENST00000555535 GLIS2Q9BZE0 524 aaPredicted RBP2.77□□□□□ -1.97
SRP54-207ENST00000555535 TTYH1Q9H313 450 aaPredicted RBP2.77□□□□□ -1.97
SRP54-207ENST00000555535 NDST4Q9H3R1 872 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 PELI2Q9HAT8 420 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 BPIFA1Q9NP55 256 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 BARHL2Q9NY43 387 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 HSPB7Q9UBY9 170 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 TAGLN3Q9UI15 199 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 TTC7AQ9ULT0 858 aaPredicted RBP2.77□□□□□ -1.97
SRP54-207ENST00000555535 PADI3Q9ULW8 664 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 FAM96BQ9Y3D0 163 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 CSAG2Q9Y5P2 127 aa2.77□□□□□ -1.97
SRP54-207ENST00000555535 TEX22C9J3V5 150 aa2.76□□□□□ -1.97
SRP54-207ENST00000555535 ZNHIT1O43257 154 aa2.76□□□□□ -1.97
SRP54-207ENST00000555535 SYNGR3O43761 229 aa2.76□□□□□ -1.97
SRP54-207ENST00000555535 PLIN1O60240 522 aa2.76□□□□□ -1.97
SRP54-207ENST00000555535 TACC1O75410 805 aa2.76□□□□□ -1.97
SRP54-207ENST00000555535 GALTP07902 379 aa2.76□□□□□ -1.97
SRP54-207ENST00000555535 DDX5P17844 614 aaKnown RBP2.76□□□□□ -1.97
SRP54-207ENST00000555535 HOXA13P31271 388 aaPredicted RBP2.76□□□□□ -1.97
SRP54-207ENST00000555535 EEF1A1P68104 462 aaKnown RBP2.76□□□□□ -1.97
SRP54-207ENST00000555535 ADCK5Q3MIX3 580 aa2.76□□□□□ -1.97
SRP54-207ENST00000555535 EEF1A1P5Q5VTE0 462 aa2.76□□□□□ -1.97
SRP54-207ENST00000555535 TXNDC8Q6A555 127 aa2.76□□□□□ -1.97
SRP54-207ENST00000555535 OR7E24Q6IFN5 339 aa2.76□□□□□ -1.97
SRP54-207ENST00000555535 METTL2BQ6P1Q9 378 aaKnown RBP2.76□□□□□ -1.97
SRP54-207ENST00000555535 CPLX2Q6PUV4 134 aaKnown RBP2.76□□□□□ -1.97
SRP54-207ENST00000555535 TRPT1Q86TN4 253 aaKnown RBP2.76□□□□□ -1.97
SRP54-207ENST00000555535 C2CD5Q86YS7 1000 aa2.76□□□□□ -1.97
SRP54-207ENST00000555535 LINC00612Q8N6U2 182 aa2.76□□□□□ -1.97
SRP54-207ENST00000555535 LINGO1Q96FE5 620 aa2.76□□□□□ -1.97
SRP54-207ENST00000555535 STAMBPL1Q96FJ0 436 aa2.76□□□□□ -1.97
SRP54-207ENST00000555535 SCRN2Q96FV2 425 aa2.76□□□□□ -1.97
SRP54-207ENST00000555535 GRAMD2BQ96HH9 432 aa2.76□□□□□ -1.97
SRP54-207ENST00000555535 METTL2AQ96IZ6 378 aaKnown RBP2.76□□□□□ -1.97
SRP54-207ENST00000555535 FOXN4Q96NZ1 517 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms