RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 FBXO6Q9NRD1 293 aaPredicted RBP10.73□□□□□ -0.69
TDP1-211ENST00000555178 SPATA6Q9NWH7 488 aaPredicted RBP10.73□□□□□ -0.69
TDP1-211ENST00000555178 HACD3Q9P035 362 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 PSMC3IPQ9P2W1 217 aaPredicted RBP10.73□□□□□ -0.69
TDP1-211ENST00000555178 CA5BQ9Y2D0 317 aa10.73□□□□□ -0.69
TDP1-211ENST00000555178 TDRD6O60522 2096 aaKnown RBP10.73□□□□□ -0.69
TDP1-211ENST00000555178 TP53BP1Q12888 1972 aaPredicted RBP10.72□□□□□ -0.69
TDP1-211ENST00000555178 A0A1W2PPM1 405 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 WNT9AO14904 365 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 RAD51BO15315 384 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 RGS16O15492 202 aaPredicted RBP10.72□□□□□ -0.69
TDP1-211ENST00000555178 PLRG1O43660 514 aaKnown RBP10.72□□□□□ -0.69
TDP1-211ENST00000555178 CDH16O75309 829 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 PCDH8O95206 1070 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 IVLP07476 585 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 INHBAP08476 426 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 PAMP19021 973 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 BCKDHBP21953 392 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 FRG1Q14331 258 aaKnown RBP10.72□□□□□ -0.69
TDP1-211ENST00000555178 TMEM52BQ4KMG9 183 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 ZNF648Q5T619 568 aaPredicted RBP10.72□□□□□ -0.69
TDP1-211ENST00000555178 ADGRD1Q6QNK2 874 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 CYS1Q717R9 158 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 NLRP9Q7RTR0 991 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 SLC26A11Q86WA9 606 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 MZB1Q8WU39 189 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 PPP1R16AQ96I34 528 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 COQ10AQ96MF6 247 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 KLF6Q99612 283 aaPredicted RBP10.72□□□□□ -0.69
TDP1-211ENST00000555178 ROPN1BQ9BZX4 212 aaPredicted RBP10.72□□□□□ -0.69
TDP1-211ENST00000555178 ACBD3Q9H3P7 528 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 TRABDQ9H4I3 376 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 ROPN1Q9HAT0 212 aaPredicted RBP10.72□□□□□ -0.69
TDP1-211ENST00000555178 MBNL1Q9NR56 388 aaKnown RBP10.72□□□□□ -0.69
TDP1-211ENST00000555178 SLC24A2Q9UI40 661 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 NOVA2Q9UNW9 492 aaKnown RBP10.72□□□□□ -0.69
TDP1-211ENST00000555178 PKP3Q9Y446 797 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 IGHV1OR15-9A0A0B4J2B8 117 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 A0A1W2PQU0 124 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 NEMP1O14524 444 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 ATG13O75143 517 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 ACADMP11310 421 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 FOXN2P32314 431 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 SPINT3P49223 89 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 FNTBP49356 437 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 THOC5Q13769 683 aaKnown RBP10.72□□□□□ -0.69
TDP1-211ENST00000555178 MAP7D1Q3KQU3 841 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 MROH9Q5TGP6 573 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 CILP2Q8IUL8 1156 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 CNTN4Q8IWV2 1026 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 OR4L1Q8NH43 312 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 CDKL2Q92772 493 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 TOE1Q96GM8 510 aaKnown RBP10.72□□□□□ -0.69
TDP1-211ENST00000555178 FAM53CQ9NYF3 392 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 LGALS13Q9UHV8 139 aa10.72□□□□□ -0.69
TDP1-211ENST00000555178 TNRC6BQ9UPQ9 1833 aaKnown RBP10.71□□□□□ -0.69
TDP1-211ENST00000555178 TBC1D3DA0A087WVF3 549 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 TBC1D3IA0A087WXS9 549 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 TBC1D3EA0A087X179 549 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 TBC1D3KA0A087X1G2 549 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 A0A1W2PQ67 120 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 TBC1D3FA6NER0 549 aaPredicted RBP10.71□□□□□ -0.69
TDP1-211ENST00000555178 GOLGA6L10A6NI86 522 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 FADS2P1A8MWK0 482 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 C10orf142B7Z368 130 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 TBC1D3LB9A6J9 549 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 CD3EAPO15446 510 aaKnown RBP10.71□□□□□ -0.69
TDP1-211ENST00000555178 SLC7A4O43246 635 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 RNGTTO60942 597 aaKnown RBP10.71□□□□□ -0.69
TDP1-211ENST00000555178 RECQL5O94762 991 aaPredicted RBP10.71□□□□□ -0.69
TDP1-211ENST00000555178 HAUS5O94927 633 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 PRAMEF1O95521 474 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 PAK4O96013 591 aaPredicted RBP10.71□□□□□ -0.69
TDP1-211ENST00000555178 SOD1P00441 154 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 AHSGP02765 367 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 ELFN1P0C7U0 828 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 TBC1D3HP0C7X1 549 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 PSMA3P25788 255 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 OAS2P29728 719 aaKnown RBP10.71□□□□□ -0.69
TDP1-211ENST00000555178 ARHGEF7Q14155 803 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 ACOX1Q15067 660 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 CHRNA6Q15825 494 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 TBC1D3GQ6DHY5 549 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 TBC1D3CQ6IPX1 549 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 CNSTQ6PJW8 725 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 TDRPQ86YL5 185 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 TBC1D3Q8IZP1 549 aaPredicted RBP10.71□□□□□ -0.69
TDP1-211ENST00000555178 GOLGA6L1Q8N7Z2 621 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 C2CD4AQ8NCU7 369 aaPredicted RBP10.71□□□□□ -0.69
TDP1-211ENST00000555178 ATP6V1G3Q96LB4 118 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 MCMBPQ9BTE3 642 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 RIOK2Q9BVS4 552 aaKnown RBP10.71□□□□□ -0.69
TDP1-211ENST00000555178 CATSPERZQ9NTU4 200 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 FETUBQ9UGM5 382 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 RIMKLBQ9ULI2 386 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 IKBKGQ9Y6K9 419 aa10.71□□□□□ -0.69
TDP1-211ENST00000555178 TRIM49D1C9J1S8 452 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 GOLGA8RI6L899 631 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 OPA1O60313 960 aa10.7□□□□□ -0.7
TDP1-211ENST00000555178 APBB3O95704 486 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms