RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, human

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDR39U1-208	ENST00000554698	TMEM9B	Q9NQ34	198 aa		21.32	■■□□□ 1
SDR39U1-208	ENST00000554698	PHPT1	Q9NRX4	125 aa	Predicted RBP	21.32	■■□□□ 1
SDR39U1-208	ENST00000554698	DNAAF2	Q9NVR5	837 aa	Known RBP	21.32	■■□□□ 1
SDR39U1-208	ENST00000554698	CNOT6	Q9ULM6	557 aa	Known RBP	21.32	■■□□□ 1
SDR39U1-208	ENST00000554698	FNDC3A	Q9Y2H6	1198 aa	Known RBP	21.32	■■□□□ 1
SDR39U1-208	ENST00000554698	HEATR9	A2RTY3	570 aa		21.31	■■□□□ 1
SDR39U1-208	ENST00000554698	GAPDHS	O14556	408 aa	Predicted RBP	21.31	■■□□□ 1
SDR39U1-208	ENST00000554698	RAD51C	O43502	376 aa		21.31	■■□□□ 1
SDR39U1-208	ENST00000554698	MLN	P12872	115 aa		21.31	■■□□□ 1
SDR39U1-208	ENST00000554698	ADRA1D	P25100	572 aa		21.31	■■□□□ 1
SDR39U1-208	ENST00000554698	RXRG	P48443	463 aa		21.31	■■□□□ 1
SDR39U1-208	ENST00000554698	NPY2R	P49146	381 aa		21.31	■■□□□ 1
SDR39U1-208	ENST00000554698	EIF2B5	Q13144	721 aa	Known RBP	21.31	■■□□□ 1
SDR39U1-208	ENST00000554698	LAMB3	Q13751	1172 aa		21.31	■■□□□ 1
SDR39U1-208	ENST00000554698	SEPT6	Q14141	434 aa		21.31	■■□□□ 1
SDR39U1-208	ENST00000554698	PRAMEF14	Q5SWL7	426 aa		21.31	■■□□□ 1
SDR39U1-208	ENST00000554698	PCGF5	Q86SE9	256 aa		21.31	■■□□□ 1
SDR39U1-208	ENST00000554698	CAND1	Q86VP6	1230 aa	Known RBP	21.31	■■□□□ 1
SDR39U1-208	ENST00000554698	OR13C4	Q8NGS5	318 aa		21.31	■■□□□ 1
SDR39U1-208	ENST00000554698	COX14	Q96I36	57 aa		21.31	■■□□□ 1
SDR39U1-208	ENST00000554698	SPATA16	Q9BXB7	569 aa		21.31	■■□□□ 1
SDR39U1-208	ENST00000554698	XAB2	Q9HCS7	855 aa	Known RBP	21.31	■■□□□ 1
SDR39U1-208	ENST00000554698	KNL1	Q8NG31	2342 aa		21.31	■■□□□ 1
SDR39U1-208	ENST00000554698	GLYATL1P3	A0A0U1RQE8	302 aa		21.3	■■□□□ 1
SDR39U1-208	ENST00000554698		A0A1B0GTQ1	180 aa		21.3	■■□□□ 1
SDR39U1-208	ENST00000554698	ZNF883	P0CG24	379 aa		21.3	■■□□□ 1
SDR39U1-208	ENST00000554698	KEL	P23276	732 aa		21.3	■■□□□ 1
SDR39U1-208	ENST00000554698	ARRB1	P49407	418 aa	Predicted RBP	21.3	■■□□□ 1
SDR39U1-208	ENST00000554698	SESN2	P58004	480 aa	Predicted RBP	21.3	■■□□□ 1
SDR39U1-208	ENST00000554698	MRPS25	P82663	173 aa	Known RBP	21.3	■■□□□ 1
SDR39U1-208	ENST00000554698	SHB	Q15464	509 aa		21.3	■■□□□ 1
SDR39U1-208	ENST00000554698	CCDC38	Q502W7	563 aa		21.3	■■□□□ 1
SDR39U1-208	ENST00000554698	IZUMO3	Q5VZ72	239 aa		21.3	■■□□□ 1
SDR39U1-208	ENST00000554698	HOOK3	Q86VS8	718 aa		21.3	■■□□□ 1
SDR39U1-208	ENST00000554698	MNS1	Q8NEH6	495 aa		21.3	■■□□□ 1
SDR39U1-208	ENST00000554698	STYX	Q8WUJ0	223 aa		21.3	■■□□□ 1
SDR39U1-208	ENST00000554698	HIC2	Q96JB3	615 aa		21.3	■■□□□ 1
SDR39U1-208	ENST00000554698	DNAJC1	Q96KC8	554 aa	Known RBP	21.3	■■□□□ 1
SDR39U1-208	ENST00000554698	WDR92	Q96MX6	357 aa		21.3	■■□□□ 1
SDR39U1-208	ENST00000554698	IL22	Q9GZX6	179 aa		21.3	■■□□□ 1
SDR39U1-208	ENST00000554698	NLE1	Q9NVX2	485 aa	Predicted RBP	21.3	■■□□□ 1
SDR39U1-208	ENST00000554698	BFAR	Q9NZS9	450 aa		21.3	■■□□□ 1
SDR39U1-208	ENST00000554698	RIMKLB	Q9ULI2	386 aa		21.3	■■□□□ 1
SDR39U1-208	ENST00000554698	PNMA8B	Q9ULN7	279 aa	Predicted RBP	21.3	■■□□□ 1
SDR39U1-208	ENST00000554698	TCAF1	Q9Y4C2	921 aa		21.3	■■□□□ 1
SDR39U1-208	ENST00000554698	RALGAPA1	Q6GYQ0	2036 aa		21.29	■■□□□ 1
SDR39U1-208	ENST00000554698	TMEM202	A6NGA9	273 aa		21.29	■■□□□ 1
SDR39U1-208	ENST00000554698	ESPN	B1AK53	854 aa		21.29	■■□□□ 1
SDR39U1-208	ENST00000554698	TNFRSF10C	O14798	259 aa		21.29	■■□□□ 1
SDR39U1-208	ENST00000554698	CSF2	P04141	144 aa		21.29	■■□□□ 1
SDR39U1-208	ENST00000554698	NME1	P15531	152 aa	Known RBP	21.29	■■□□□ 1
SDR39U1-208	ENST00000554698	HADHA	P40939	763 aa		21.29	■■□□□ 1
SDR39U1-208	ENST00000554698	MAGEA3	P43357	314 aa		21.29	■■□□□ 1
SDR39U1-208	ENST00000554698	LIMK1	P53667	647 aa		21.29	■■□□□ 1
SDR39U1-208	ENST00000554698	XIAP	P98170	497 aa		21.29	■■□□□ 1
SDR39U1-208	ENST00000554698	ARMC3	Q5W041	872 aa		21.29	■■□□□ 1
SDR39U1-208	ENST00000554698	FAM151B	Q6UXP7	276 aa		21.29	■■□□□ 1
SDR39U1-208	ENST00000554698	SERPINB12	Q96P63	405 aa		21.29	■■□□□ 1
SDR39U1-208	ENST00000554698	ERP44	Q9BS26	406 aa		21.29	■■□□□ 1
SDR39U1-208	ENST00000554698	FRMD8	Q9BZ67	464 aa	Predicted RBP	21.29	■■□□□ 1
SDR39U1-208	ENST00000554698	KLF15	Q9UIH9	416 aa		21.29	■■□□□ 1
SDR39U1-208	ENST00000554698	FKBPL	Q9UIM3	349 aa		21.29	■■□□□ 1
SDR39U1-208	ENST00000554698	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	EFCAB8	A8MWE9	144 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	GOLGA8M	H3BSY2	632 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698		H7C0S8	307 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	INPP4B	O15327	924 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	TP73	O15350	636 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	YKT6	O15498	198 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	AVIL	O75366	819 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	SEC31A	O94979	1220 aa	Known RBP	21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	MGAT1	P26572	445 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	DEK	P35659	375 aa	Known RBP	21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	CCT8	P50990	548 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	MORF4L2	Q15014	288 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	CHRNA6	Q15825	494 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	SKIDA1	Q1XH10	827 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	ALG11	Q2TAA5	492 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	ATP13A5	Q4VNC0	1218 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	PCID2	Q5JVF3	399 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	STPG1	Q5TH74	334 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	ENPP7	Q6UWV6	458 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	NLRP9	Q7RTR0	991 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	PPHLN1	Q8NEY8	458 aa	Known RBP	21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	OR56A4	Q8NGH8	313 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	BTN2A2	Q8WVV5	523 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	PEX13	Q92968	403 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	SNF8	Q96H20	258 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	VPS35	Q96QK1	796 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	FGF22	Q9HCT0	170 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	DNAJC28	Q9NX36	388 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	APPL1	Q9UKG1	709 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	TMPRSS11E	Q9UL52	423 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	SLC17A4	Q9Y2C5	497 aa		21.28	■■□□□ 1
SDR39U1-208	ENST00000554698	SCN8A	Q9UQD0	1980 aa		21.27	■■□□□ 1
SDR39U1-208	ENST00000554698	C4orf47	A7E2U8	309 aa		21.27	■■□□□ 1
SDR39U1-208	ENST00000554698	SMAP	O00193	183 aa		21.27	■■□□□ 1
SDR39U1-208	ENST00000554698	PRAMEF1	O95521	474 aa		21.27	■■□□□ 1
SDR39U1-208	ENST00000554698	CEACAM5	P06731	702 aa		21.27	■■□□□ 1
SDR39U1-208	ENST00000554698	RPL21	P46778	160 aa	Known RBP	21.27	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms