RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 OGFOD3Q6PK18 319 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 KDELC1Q6UW63 502 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 RFLNAQ6ZTI6 216 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 B4GALNT4Q76KP1 1039 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 EFL1Q7Z2Z2 1120 aaKnown RBP7.49□□□□□ -1.21
LINC00640-201ENST00000554409 LYSMD3Q7Z3D4 306 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 TMC3Q7Z5M5 1100 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 ZC3H18Q86VM9 953 aaKnown RBP7.49□□□□□ -1.21
LINC00640-201ENST00000554409 MARCH9Q86YJ5 346 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 ZNF567Q8N184 647 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 KYQ8NBH2 561 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 SPC24Q8NBT2 197 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 GPR156Q8NFN8 814 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 SPATA22Q8NHS9 363 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 CCHCR1Q8TD31 782 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 GPBAR1Q8TDU6 330 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 UBE2Q2Q8WVN8 375 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 HTR3CQ8WXA8 447 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 ALG3Q92685 438 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 SCAMP4Q969E2 229 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 GRAMD1AQ96CP6 724 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 NXPE2Q96DL1 559 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 COX14Q96I36 57 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 HIC2Q96JB3 615 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 DEPDC7Q96QD5 511 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 FCRL5Q96RD9 977 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 SRPK1Q96SB4 655 aaKnown RBP7.49□□□□□ -1.21
LINC00640-201ENST00000554409 HERPUD2Q9BSE4 406 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 OSBPL8Q9BZF1 889 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 TMEM168Q9H0V1 697 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 CDH19Q9H159 772 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 CARS2Q9HA77 564 aaKnown RBP7.49□□□□□ -1.21
LINC00640-201ENST00000554409 ZFYVE1Q9HBF4 777 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 CYP4F12Q9HCS2 524 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 RAD18Q9NS91 495 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 TRNAU1APQ9NX07 287 aaKnown RBP7.49□□□□□ -1.21
LINC00640-201ENST00000554409 VPS18Q9P253 973 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 FAM153AQ9UHL3 310 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 CD84Q9UIB8 345 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 TRHDEQ9UKU6 1024 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 SUFUQ9UMX1 484 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 GPR34Q9UPC5 381 aa7.49□□□□□ -1.21
LINC00640-201ENST00000554409 LOC285095A0A1B0GVY8 99 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 MACROD2A1Z1Q3 448 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 CPED1A4D0V7 1026 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 GOLGA6CA6NDK9 693 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 GOLGA6BA6NDN3 693 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 SRRM3A6NNA2 597 aaPredicted RBP7.48□□□□□ -1.21
LINC00640-201ENST00000554409 TAF4O00268 1085 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 NTN3O00634 580 aaPredicted RBP7.48□□□□□ -1.21
LINC00640-201ENST00000554409 NOBOXO60393 691 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 EPOP01588 193 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 GOLGA6DP0CG33 693 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 PNLIPP16233 465 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 NFKB1P19838 968 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 CETN2P41208 172 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 OTUD4Q01804 1114 aaKnown RBP7.48□□□□□ -1.21
LINC00640-201ENST00000554409 ILF3Q12906 894 aaKnown RBP eCLIP7.48□□□□□ -1.21
LINC00640-201ENST00000554409 MPP3Q13368 585 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 PEX6Q13608 980 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 HLTFQ14527 1009 aaKnown RBP eCLIP7.48□□□□□ -1.21
LINC00640-201ENST00000554409 LLGL1Q15334 1064 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 PCSK7Q16549 785 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 MSS51Q4VC12 460 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 PDPK2PQ6A1A2 396 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 PID1Q7Z2X4 250 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 PEX26Q7Z412 305 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 TAF8Q7Z7C8 310 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 C17orf82Q86X59 251 aaPredicted RBP7.48□□□□□ -1.21
LINC00640-201ENST00000554409 NRROSQ86YC3 692 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 RNF10Q8N5U6 811 aaKnown RBP7.48□□□□□ -1.21
LINC00640-201ENST00000554409 UBL4BQ8N7F7 174 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 MDM1Q8TC05 714 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 ACTL9Q8TC94 416 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 MAPK15Q8TD08 544 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 HAUS1Q96CS2 278 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 EID2BQ96D98 161 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 MRGPRX2Q96LB1 330 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 AGAP2Q99490 1192 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 USB1Q9BQ65 265 aaKnown RBP7.48□□□□□ -1.21
LINC00640-201ENST00000554409 CCDC3Q9BQI4 270 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 DESI2Q9BSY9 194 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 RIOK2Q9BVS4 552 aaKnown RBP7.48□□□□□ -1.21
LINC00640-201ENST00000554409 HEMGNQ9BXL5 484 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 GSDMCQ9BYG8 508 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 ABCG4Q9H172 646 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 FAM83DQ9H4H8 585 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 GOLGA6AQ9NYA3 693 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 SIRPGQ9P1W8 387 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 KLHL8Q9P2G9 620 aaPredicted RBP7.48□□□□□ -1.21
LINC00640-201ENST00000554409 TRIM10Q9UDY6 481 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 MOSPD1Q9UJG1 213 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 AMFRQ9UKV5 643 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 CNOT6Q9ULM6 557 aaKnown RBP7.48□□□□□ -1.21
LINC00640-201ENST00000554409 ZNF711Q9Y462 761 aa7.48□□□□□ -1.21
LINC00640-201ENST00000554409 GOLGA4Q13439 2230 aaKnown RBP7.47□□□□□ -1.21
LINC00640-201ENST00000554409 ARHGEF17Q96PE2 2063 aaPredicted RBP7.47□□□□□ -1.21
LINC00640-201ENST00000554409 EPG5Q9HCE0 2579 aa7.47□□□□□ -1.21
LINC00640-201ENST00000554409 A0A0U1RQJ8 604 aa7.47□□□□□ -1.21
LINC00640-201ENST00000554409 FADS2P1A8MWK0 482 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms