RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 RFX6Q8HWS3 928 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 HID1Q8IV36 788 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 CCDC50Q8IVM0 306 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 ARHGAP12Q8IWW6 846 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 NPWQ8N729 165 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 PLD5Q8N7P1 536 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 OR2AP1Q8NGE2 309 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 HCAR2Q8TDS4 363 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 TSACCQ96A04 125 aaPredicted RBP7.74□□□□□ -1.17
ABCD4-220ENST00000553998 HMCESQ96FZ2 354 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 SLC45A3Q96JT2 553 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 TAAR9Q96RI9 348 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 SPON2Q9BUD6 331 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 APOOQ9BUR5 198 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 TLR10Q9BXR5 811 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 SPRY4Q9C004 299 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 SLC39A8Q9C0K1 460 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 BRD8Q9H0E9 1235 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 CARD9Q9H257 536 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 SEMA6CQ9H3T2 930 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 ZDHHC6Q9H6R6 413 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 ETNK2Q9NVF9 386 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 WDR70Q9NW82 654 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 SIRPGQ9P1W8 387 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 DKK3Q9UBP4 350 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 ITM2BQ9Y287 266 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 FCF1Q9Y324 198 aaKnown RBP7.74□□□□□ -1.17
ABCD4-220ENST00000553998 MFHAS1Q9Y4C4 1052 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 NBASA2RRP1 2371 aa7.74□□□□□ -1.17
ABCD4-220ENST00000553998 USP27XA6NNY8 438 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 TNFRSF10CO14798 259 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 PRAMEF11O60813 436 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 ZNF189O75820 626 aaPredicted RBP7.73□□□□□ -1.17
ABCD4-220ENST00000553998 TJP3O95049 919 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 CPNE6O95741 557 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 HOXC4P09017 264 aaPredicted RBP7.73□□□□□ -1.17
ABCD4-220ENST00000553998 PYGMP11217 842 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 FGF3P11487 239 aaPredicted RBP7.73□□□□□ -1.17
ABCD4-220ENST00000553998 LIFP15018 202 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 TIMP2P16035 220 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 HTR1BP28222 390 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 GKP32189 559 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 UGT1A3P35503 534 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 PAPOLAP51003 745 aaKnown RBP7.73□□□□□ -1.17
ABCD4-220ENST00000553998 DNA2P51530 1060 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 MAPK10P53779 464 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 SNRPD1P62314 119 aaKnown RBP7.73□□□□□ -1.17
ABCD4-220ENST00000553998 IL10RBQ08334 325 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 GALNT2Q10471 571 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 TRA2AQ13595 282 aaKnown RBP eCLIP7.73□□□□□ -1.17
ABCD4-220ENST00000553998 RFTN1Q14699 578 aaPredicted RBP7.73□□□□□ -1.17
ABCD4-220ENST00000553998 LRRC14Q15048 493 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 PDK1Q15118 436 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 IRF4Q15306 451 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 WSCD2Q2TBF2 565 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 C14orf28Q4W4Y0 310 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 ZNF569Q5MCW4 686 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 SEL1L2Q5TEA6 688 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 GDPD4Q6W3E5 623 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 PIM3Q86V86 326 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 ATPAF2Q8N5M1 289 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 Q8N9G6 341 aaPredicted RBP7.73□□□□□ -1.17
ABCD4-220ENST00000553998 TTC13Q8NBP0 860 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 ATL2Q8NHH9 583 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 C9orf43Q8TAL5 461 aaPredicted RBP7.73□□□□□ -1.17
ABCD4-220ENST00000553998 CXorf40AQ8TE69 158 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 FATE1Q969F0 183 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 CELF6Q96J87 481 aaKnown RBP7.73□□□□□ -1.17
ABCD4-220ENST00000553998 KLHL32Q96NJ5 620 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 ZNF599Q96NL3 588 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 TSGA13Q96PP4 275 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 DDA1Q9BW61 102 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 OSBPL8Q9BZF1 889 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 LRRC4CQ9HCJ2 640 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 DTLQ9NZJ0 730 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 AKAP7Q9P0M2 348 aaPredicted RBP7.73□□□□□ -1.17
ABCD4-220ENST00000553998 LRIT1Q9P2V4 623 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 PACSIN2Q9UNF0 486 aaPredicted RBP7.73□□□□□ -1.17
ABCD4-220ENST00000553998 PLAAQ9Y263 795 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 ZKSCAN5Q9Y2L8 839 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 ACTL7AQ9Y615 435 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 ITPR2Q14571 2701 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 KIF26BQ2KJY2 2108 aa7.73□□□□□ -1.17
ABCD4-220ENST00000553998 ANKRD17O75179 2603 aaKnown RBP7.72□□□□□ -1.17
ABCD4-220ENST00000553998 CFAP69A5D8W1 941 aa7.72□□□□□ -1.17
ABCD4-220ENST00000553998 ZNF891A8MT65 544 aaPredicted RBP7.72□□□□□ -1.17
ABCD4-220ENST00000553998 APOC4-APOC2K7ER74 178 aa7.72□□□□□ -1.17
ABCD4-220ENST00000553998 DFFAO00273 331 aa7.72□□□□□ -1.17
ABCD4-220ENST00000553998 PPP1R12AO14974 1030 aaPredicted RBP7.72□□□□□ -1.17
ABCD4-220ENST00000553998 MFSD11O43934 449 aa7.72□□□□□ -1.17
ABCD4-220ENST00000553998 MAFKO60675 156 aa7.72□□□□□ -1.17
ABCD4-220ENST00000553998 CST8O60676 142 aa7.72□□□□□ -1.17
ABCD4-220ENST00000553998 TNFP01375 233 aa7.72□□□□□ -1.17
ABCD4-220ENST00000553998 APOC2P02655 101 aa7.72□□□□□ -1.17
ABCD4-220ENST00000553998 TUBB4AP04350 444 aa7.72□□□□□ -1.17
ABCD4-220ENST00000553998 UGT2B4P06133 528 aa7.72□□□□□ -1.17
ABCD4-220ENST00000553998 ITIH2P19823 946 aa7.72□□□□□ -1.17
ABCD4-220ENST00000553998 CCNCP24863 283 aa7.72□□□□□ -1.17
ABCD4-220ENST00000553998 TRIM23P36406 574 aa7.72□□□□□ -1.17
ABCD4-220ENST00000553998 HSPA9P38646 679 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms