RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 LINC00303Q3SY05 128 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 PPP6R3Q5H9R7 873 aaPredicted RBP8.84□□□□□ -0.99
TDP1-208ENST00000553989 LIPIQ6XZB0 460 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 ATG14Q6ZNE5 492 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 DPPA4Q7L190 304 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 PIM3Q86V86 326 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 SFTPA2Q8IWL1 248 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 EXD3Q8N9H8 876 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 EIF1ADQ8N9N8 165 aaKnown RBP8.84□□□□□ -0.99
TDP1-208ENST00000553989 CCL4L1Q8NHW4 92 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 COG1Q8WTW3 980 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 ZDHHC1Q8WTX9 485 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 NUS1Q96E22 293 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 AGPAT1Q99943 283 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 GSDMCQ9BYG8 508 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 SLC39A8Q9C0K1 460 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 LACRTQ9GZZ8 138 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 SEMA6CQ9H3T2 930 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 LRRC19Q9H756 370 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 PHPT1Q9NRX4 125 aaPredicted RBP8.84□□□□□ -0.99
TDP1-208ENST00000553989 AIPL1Q9NZN9 384 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 PCSK1NQ9UHG2 260 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 ACSL6Q9UKU0 697 aa8.84□□□□□ -0.99
TDP1-208ENST00000553989 ANKRD36A6QL64 1941 aa8.84□□□□□ -1
TDP1-208ENST00000553989 ATMQ13315 3056 aa8.83□□□□□ -1
TDP1-208ENST00000553989 A0A0U1RQJ8 604 aa8.83□□□□□ -1
TDP1-208ENST00000553989 CFAP69A5D8W1 941 aa8.83□□□□□ -1
TDP1-208ENST00000553989 TMCO5BA8MYB1 307 aa8.83□□□□□ -1
TDP1-208ENST00000553989 STMND1H3BQB6 276 aa8.83□□□□□ -1
TDP1-208ENST00000553989 TNFRSF10CO14798 259 aa8.83□□□□□ -1
TDP1-208ENST00000553989 PRPSAP2O60256 369 aa8.83□□□□□ -1
TDP1-208ENST00000553989 PPFIA2O75334 1257 aa8.83□□□□□ -1
TDP1-208ENST00000553989 CCDC172P0C7W6 258 aa8.83□□□□□ -1
TDP1-208ENST00000553989 MYCLP1P12525 358 aaPredicted RBP8.83□□□□□ -1
TDP1-208ENST00000553989 CD82P27701 267 aa8.83□□□□□ -1
TDP1-208ENST00000553989 TNFRSF8P28908 595 aa8.83□□□□□ -1
TDP1-208ENST00000553989 GNPDA1P46926 289 aa8.83□□□□□ -1
TDP1-208ENST00000553989 CSNK1DP48730 415 aa8.83□□□□□ -1
TDP1-208ENST00000553989 RENBPP51606 427 aa8.83□□□□□ -1
TDP1-208ENST00000553989 OR1D5P58170 312 aa8.83□□□□□ -1
TDP1-208ENST00000553989 AP1S1P61966 158 aa8.83□□□□□ -1
TDP1-208ENST00000553989 CYP4F2P78329 520 aa8.83□□□□□ -1
TDP1-208ENST00000553989 RFTN1Q14699 578 aaPredicted RBP8.83□□□□□ -1
TDP1-208ENST00000553989 CCDC181Q5TID7 509 aa8.83□□□□□ -1
TDP1-208ENST00000553989 RAET1GQ6H3X3 334 aa8.83□□□□□ -1
TDP1-208ENST00000553989 PNCKQ6P2M8 343 aa8.83□□□□□ -1
TDP1-208ENST00000553989 EMBQ6PCB8 327 aa8.83□□□□□ -1
TDP1-208ENST00000553989 OGFOD3Q6PK18 319 aa8.83□□□□□ -1
TDP1-208ENST00000553989 DOK6Q6PKX4 331 aa8.83□□□□□ -1
TDP1-208ENST00000553989 SLC30A9Q6PML9 568 aa8.83□□□□□ -1
TDP1-208ENST00000553989 XKR5Q6UX68 686 aa8.83□□□□□ -1
TDP1-208ENST00000553989 RFX8Q6ZV50 586 aa8.83□□□□□ -1
TDP1-208ENST00000553989 HEATR4Q86WZ0 1026 aa8.83□□□□□ -1
TDP1-208ENST00000553989 CREG2Q8IUH2 290 aa8.83□□□□□ -1
TDP1-208ENST00000553989 SLITRK4Q8IW52 837 aa8.83□□□□□ -1
TDP1-208ENST00000553989 IFT20Q8IY31 132 aa8.83□□□□□ -1
TDP1-208ENST00000553989 IL22RA1Q8N6P7 574 aa8.83□□□□□ -1
TDP1-208ENST00000553989 NOA1Q8NC60 698 aaKnown RBP8.83□□□□□ -1
TDP1-208ENST00000553989 RCBTB1Q8NDN9 531 aa8.83□□□□□ -1
TDP1-208ENST00000553989 LGR4Q9BXB1 951 aa8.83□□□□□ -1
TDP1-208ENST00000553989 FAM107BQ9H098 131 aa8.83□□□□□ -1
TDP1-208ENST00000553989 VPS18Q9P253 973 aa8.83□□□□□ -1
TDP1-208ENST00000553989 B4GALT6Q9UBX8 382 aa8.83□□□□□ -1
TDP1-208ENST00000553989 SEPT3Q9UH03 358 aa8.83□□□□□ -1
TDP1-208ENST00000553989 IL17BQ9UHF5 180 aa8.83□□□□□ -1
TDP1-208ENST00000553989 LRP4O75096 1905 aa8.83□□□□□ -1
TDP1-208ENST00000553989 CFAP46Q8IYW2 2715 aa8.82□□□□□ -1
TDP1-208ENST00000553989 LRRK1Q38SD2 2015 aa8.82□□□□□ -1
TDP1-208ENST00000553989 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.82□□□□□ -1
TDP1-208ENST00000553989 TCRBV5S1A1TA0A578 114 aa8.82□□□□□ -1
TDP1-208ENST00000553989 C9orf172C9J069 976 aa8.82□□□□□ -1
TDP1-208ENST00000553989 CFAP99D6REC4 459 aa8.82□□□□□ -1
TDP1-208ENST00000553989 GOLGA8KD6RF30 607 aa8.82□□□□□ -1
TDP1-208ENST00000553989 RNF8O76064 485 aa8.82□□□□□ -1
TDP1-208ENST00000553989 CPP00450 1065 aa8.82□□□□□ -1
TDP1-208ENST00000553989 HOXC4P09017 264 aaPredicted RBP8.82□□□□□ -1
TDP1-208ENST00000553989 CYP2A6P11509 494 aaPredicted RBP8.82□□□□□ -1
TDP1-208ENST00000553989 CCL4P13236 92 aa8.82□□□□□ -1
TDP1-208ENST00000553989 CCNB1P14635 433 aa8.82□□□□□ -1
TDP1-208ENST00000553989 ERCC2P18074 760 aa8.82□□□□□ -1
TDP1-208ENST00000553989 TNFAIP3P21580 790 aa8.82□□□□□ -1
TDP1-208ENST00000553989 AK4P27144 223 aaPredicted RBP8.82□□□□□ -1
TDP1-208ENST00000553989 OGDHQ02218 1023 aa8.82□□□□□ -1
TDP1-208ENST00000553989 IL10RBQ08334 325 aa8.82□□□□□ -1
TDP1-208ENST00000553989 PEX6Q13608 980 aa8.82□□□□□ -1
TDP1-208ENST00000553989 LBRQ14739 615 aaKnown RBP8.82□□□□□ -1
TDP1-208ENST00000553989 C16orf72Q14CZ0 275 aa8.82□□□□□ -1
TDP1-208ENST00000553989 TBR1Q16650 682 aa8.82□□□□□ -1
TDP1-208ENST00000553989 ZSCAN26Q16670 478 aa8.82□□□□□ -1
TDP1-208ENST00000553989 CA9Q16790 459 aa8.82□□□□□ -1
TDP1-208ENST00000553989 ERMARDQ5T6L9 678 aa8.82□□□□□ -1
TDP1-208ENST00000553989 TMCO4Q5TGY1 634 aa8.82□□□□□ -1
TDP1-208ENST00000553989 AFMIDQ63HM1 303 aa8.82□□□□□ -1
TDP1-208ENST00000553989 ACAD10Q6JQN1 1059 aa8.82□□□□□ -1
TDP1-208ENST00000553989 PPP1R2P3Q6NXS1 205 aa8.82□□□□□ -1
TDP1-208ENST00000553989 ARHGAP36Q6ZRI8 547 aa8.82□□□□□ -1
TDP1-208ENST00000553989 TMPRSS9Q7Z410 1059 aa8.82□□□□□ -1
TDP1-208ENST00000553989 LAPTM4BQ86VI4 370 aa8.82□□□□□ -1
TDP1-208ENST00000553989 MCOLN2Q8IZK6 566 aa8.82□□□□□ -1
TDP1-208ENST00000553989 BBS5Q8N3I7 341 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms