RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 CNTFP26441 200 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 ARNTP27540 789 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 PMLP29590 882 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 FOXN2P32314 431 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 GP5P40197 560 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 ETV3P41162 512 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 SERPINB9P50453 376 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 CSE1LP55060 971 aaKnown RBP14.44□□□□□ -0.1
SHMT2-210ENST00000553950 NFATC2Q13469 925 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 RASA2Q15283 850 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 KBTBD12Q3ZCT8 623 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 TMEM259Q4ZIN3 620 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 HSP90AA5PQ58FG0 334 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 ZRANB3Q5FWF4 1079 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 TBC1D3GQ6DHY5 549 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 TBC1D3CQ6IPX1 549 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 FAM151BQ6UXP7 276 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 TECPR1Q7Z6L1 1165 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 FAM124AQ86V42 546 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 CILP2Q8IUL8 1156 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 PHYKPLQ8IUZ5 450 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 TBC1D3Q8IZP1 549 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-210ENST00000553950 AP2M1Q96CW1 435 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 EID2BQ96D98 161 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 VPS35Q96QK1 796 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 TRIM56Q9BRZ2 755 aaKnown RBP14.44□□□□□ -0.1
SHMT2-210ENST00000553950 TMEM109Q9BVC6 243 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 SPATA16Q9BXB7 569 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 BPIFA1Q9NP55 256 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 IL26Q9NPH9 171 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 VPS18Q9P253 973 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 PSMC3IPQ9P2W1 217 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-210ENST00000553950 RABGEF1Q9UJ41 708 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 ZNF180Q9UJW8 692 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 FBXO4Q9UKT5 387 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 DMTF1Q9Y222 760 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 KCTD3Q9Y597 815 aa14.44□□□□□ -0.1
SHMT2-210ENST00000553950 IGHV1OR15-9A0A0B4J2B8 117 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 GOLGA8CPA6NN73 597 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 CFAP99D6REC4 459 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 QSOX1O00391 747 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 TOR1BO14657 336 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 CD3EAPO15446 510 aaKnown RBP14.43□□□□□ -0.1
SHMT2-210ENST00000553950 ERVK-10P10266 1014 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 RALBP11234 206 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 ATP5DP30049 168 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 MSH2P43246 934 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 ARSDP51689 593 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 NUBP1P53384 320 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 XIAPP98170 497 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 PEX6Q13608 980 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 ITIH4Q14624 930 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 TYSND1Q2T9J0 566 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 LGSNQ5TDP6 509 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 KIAA0895LQ68EN5 471 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 RAET1GQ6H3X3 334 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 TRMT10BQ6PF06 316 aaKnown RBP14.43□□□□□ -0.1
SHMT2-210ENST00000553950 Q6ZVL8 140 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 PTAR1Q7Z6K3 402 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-210ENST00000553950 TDRPQ86YL5 185 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 GOLGA6L1Q8N7Z2 621 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 PPM1NQ8N819 430 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 GPR26Q8NDV2 337 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 CADM4Q8NFZ8 388 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 FAM174AQ8TBP5 190 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 TOE1Q96GM8 510 aaKnown RBP14.43□□□□□ -0.1
SHMT2-210ENST00000553950 PAFAH2Q99487 392 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 C1QTNF2Q9BXJ5 285 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 TPSD1Q9BZJ3 242 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 STMN4Q9H169 189 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-210ENST00000553950 ASB8Q9H765 288 aa14.43□□□□□ -0.1
SHMT2-210ENST00000553950 IARS2Q9NSE4 1012 aaKnown RBP14.43□□□□□ -0.1
SHMT2-210ENST00000553950 WSB2Q9NYS7 404 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-210ENST00000553950 FNDC3AQ9Y2H6 1198 aaKnown RBP14.43□□□□□ -0.1
SHMT2-210ENST00000553950 PIKFYVEQ9Y2I7 2098 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 TRBV5-4A0A0C4DH59 114 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 PRR23AA6NEV1 266 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 IGLON5A6NGN9 336 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 FAM47DPA6NHR8 397 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 TNFRSF10AO00220 468 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 KRT38O76015 456 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 HNRNPA2B1P22626 353 aaKnown RBP14.42□□□□□ -0.1
SHMT2-210ENST00000553950 AKT2P31751 481 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 ACSL1P33121 698 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 SLC1A2P43004 574 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 SEMG2Q02383 582 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 GPS2Q13227 327 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 LRRC14Q15048 493 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 PTPRRQ15256 657 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 LDLRAP1Q5SW96 308 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 TEDDM1Q5T9Z0 273 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 WDR5BQ86VZ2 330 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 C1orf210Q8IVY1 113 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 RBFAQ8N0V3 343 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 DTWD2Q8NBA8 298 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 C2CD4AQ8NCU7 369 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-210ENST00000553950 ZNF398Q8TD17 642 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 SLC44A1Q8WWI5 657 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 FOXJ1Q92949 421 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 MTBPQ96DY7 904 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms