RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 FUT6P51993 359 aa3.23□□□□□ -1.89
VRK1-202ENST00000553683 TFAP4Q01664 338 aa3.23□□□□□ -1.89
VRK1-202ENST00000553683 DCTN2Q13561 401 aaKnown RBP3.23□□□□□ -1.89
VRK1-202ENST00000553683 KRTAP24-1Q3LI83 254 aa3.23□□□□□ -1.89
VRK1-202ENST00000553683 CXorf66Q5JRM2 361 aaPredicted RBP3.23□□□□□ -1.89
VRK1-202ENST00000553683 FAM72AQ5TYM5 149 aa3.23□□□□□ -1.89
VRK1-202ENST00000553683 FAM72DQ6L9T8 149 aa3.23□□□□□ -1.89
VRK1-202ENST00000553683 DUS1LQ6P1R4 473 aaKnown RBP3.23□□□□□ -1.89
VRK1-202ENST00000553683 ATF7IPQ6VMQ6 1270 aa3.23□□□□□ -1.89
VRK1-202ENST00000553683 R3HCC1LQ7Z5L2 792 aaKnown RBP3.23□□□□□ -1.89
VRK1-202ENST00000553683 HAPLN4Q86UW8 402 aa3.23□□□□□ -1.89
VRK1-202ENST00000553683 HEATR4Q86WZ0 1026 aa3.23□□□□□ -1.89
VRK1-202ENST00000553683 FAM72BQ86X60 149 aa3.23□□□□□ -1.89
VRK1-202ENST00000553683 NRROSQ86YC3 692 aa3.23□□□□□ -1.89
VRK1-202ENST00000553683 DIS3L2Q8IYB7 885 aaKnown RBP3.23□□□□□ -1.89
VRK1-202ENST00000553683 ZNF34Q8IZ26 560 aa3.23□□□□□ -1.89
VRK1-202ENST00000553683 BEST3Q8N1M1 668 aa3.23□□□□□ -1.89
VRK1-202ENST00000553683 PCDH20Q8N6Y1 951 aaKnown RBP3.23□□□□□ -1.89
VRK1-202ENST00000553683 INTS12Q96CB8 462 aaKnown RBP3.23□□□□□ -1.89
VRK1-202ENST00000553683 PPP1R13BQ96KQ4 1090 aa3.23□□□□□ -1.89
VRK1-202ENST00000553683 C7orf26Q96N11 449 aa3.23□□□□□ -1.89
VRK1-202ENST00000553683 NODALQ96S42 347 aa3.23□□□□□ -1.89
VRK1-202ENST00000553683 MTERF1Q99551 399 aaKnown RBP3.23□□□□□ -1.89
VRK1-202ENST00000553683 NEURL2Q9BR09 285 aa3.23□□□□□ -1.89
VRK1-202ENST00000553683 PCGF1Q9BSM1 259 aa3.23□□□□□ -1.89
VRK1-202ENST00000553683 KIF9Q9HAQ2 790 aa3.23□□□□□ -1.89
VRK1-202ENST00000553683 FBRSL1Q9HCM7 1045 aaKnown RBP3.23□□□□□ -1.89
VRK1-202ENST00000553683 ACSS1Q9NUB1 689 aaPredicted RBP3.23□□□□□ -1.89
VRK1-202ENST00000553683 ZNF69Q9UC07 566 aa3.23□□□□□ -1.89
VRK1-202ENST00000553683 CAMK2AQ9UQM7 478 aa3.23□□□□□ -1.89
VRK1-202ENST00000553683 TCF19Q9Y242 345 aa3.23□□□□□ -1.89
VRK1-202ENST00000553683 DLGAP4Q9Y2H0 992 aa3.23□□□□□ -1.89
VRK1-202ENST00000553683 ADAM18Q9Y3Q7 739 aa3.23□□□□□ -1.89
VRK1-202ENST00000553683 CAPN7Q9Y6W3 813 aa3.23□□□□□ -1.89
VRK1-202ENST00000553683 MAU2Q9Y6X3 613 aa3.23□□□□□ -1.89
VRK1-202ENST00000553683 TDRD9Q8NDG6 1382 aaKnown RBP3.23□□□□□ -1.89
VRK1-202ENST00000553683 PTPRCP08575 1304 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 A0A087WYN8 130 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 C16orf97H3BN30 126 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 P2RY10O00398 339 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 SCAMP1O15126 338 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 HCRTR2O43614 444 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 BUD23O43709 281 aaKnown RBP3.22□□□□□ -1.89
VRK1-202ENST00000553683 WDR1O75083 606 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 IPO7O95373 1038 aaKnown RBP3.22□□□□□ -1.89
VRK1-202ENST00000553683 DDX58O95786 925 aaKnown RBP3.22□□□□□ -1.89
VRK1-202ENST00000553683 CRYAAP02489 173 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 ATP1A1P05023 1023 aaKnown RBP3.22□□□□□ -1.89
VRK1-202ENST00000553683 HSPA1AP0DMV8 641 aaKnown RBP3.22□□□□□ -1.89
VRK1-202ENST00000553683 HSPA1BP0DMV9 641 aaKnown RBP3.22□□□□□ -1.89
VRK1-202ENST00000553683 PHEXP78562 749 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 MRPS34P82930 218 aaKnown RBP3.22□□□□□ -1.89
VRK1-202ENST00000553683 NIPAL4Q0D2K0 466 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 MAD2L1Q13257 205 aaPredicted RBP3.22□□□□□ -1.89
VRK1-202ENST00000553683 GTF2H2Q13888 395 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 COL28A1Q2UY09 1125 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 IRAK1BP1Q5VVH5 260 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 PMS2CLQ68D20 193 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 LCN10Q6JVE6 187 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 TTI2Q6NXR4 508 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 GTF2H2CQ6P1K8 395 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 TSSK4Q6SA08 328 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 ASB18Q6ZVZ8 466 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 USP43Q70EL4 1123 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 IL17RCQ8NAC3 791 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 OR2AK2Q8NG84 335 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 SLC20A1Q8WUM9 679 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 APBB2Q92870 758 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 IGSF8Q969P0 613 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 ARHGEF26Q96DR7 871 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 MMABQ96EY8 250 aaPredicted RBP3.22□□□□□ -1.89
VRK1-202ENST00000553683 RRNAD1Q96FB5 475 aaKnown RBP3.22□□□□□ -1.89
VRK1-202ENST00000553683 SCRN2Q96FV2 425 aa3.22□□□□□ -1.89
VRK1-202ENST00000553683 KANSL1LA0AUZ9 987 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 CTAGE9A4FU28 777 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 F5H0A9 414 aaPredicted RBP3.21□□□□□ -1.9
VRK1-202ENST00000553683 M0QZ24 198 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 VCYO14598 125 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 HS3ST1O14792 307 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 TGFB1I1O43294 461 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 CREB3O43889 395 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 LMX1BO60663 402 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 NDUFS3O75489 264 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 SLC25A12O75746 678 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 EGFP01133 1207 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 CTAGE8P0CG41 777 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 FAM106CPP0CH98 169 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 PAX1P15863 534 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 KCNA5P22460 613 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 CORO1AP31146 461 aaKnown RBP3.21□□□□□ -1.9
VRK1-202ENST00000553683 CDKN1AP38936 164 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 APOBEC1P41238 236 aaKnown RBP3.21□□□□□ -1.9
VRK1-202ENST00000553683 PRCPP42785 496 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 HARS2P49590 506 aaKnown RBP3.21□□□□□ -1.9
VRK1-202ENST00000553683 CCR9P51686 369 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 TAS2R38P59533 333 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 KRTAP10-6P60371 365 aaPredicted RBP3.21□□□□□ -1.9
VRK1-202ENST00000553683 GOLGA8DPQ0D2H9 430 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 TMEM115Q12893 351 aaPredicted RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms