RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 ADARP55265 1226 aaKnown RBP19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 OCRLQ01968 901 aa19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 NFATC2Q13469 925 aa19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 CSHL1Q14406 222 aa19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 ZNF234Q14588 700 aa19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 ITIH4Q14624 930 aa19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 TSNAXIP1Q2TAA8 658 aa19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 FNDC3BQ53EP0 1204 aaKnown RBP19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 ZNF805Q5CZA5 627 aa19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 C9orf64Q5T6V5 341 aa19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 GPR26Q8NDV2 337 aa19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 DKK3Q9UBP4 350 aa19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 HCN2Q9UL51 889 aa19.47■□□□□ 0.71
RBFOX1-215ENST00000553186 ANTXRLA6NF34 631 aa19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 HLA-EP13747 358 aa19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 TIMP2P16035 220 aa19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 SLC26A3P40879 764 aa19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 SETMARQ53H47 684 aaPredicted RBP19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 TAS2R42Q7RTR8 314 aa19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 HCAR2Q8TDS4 363 aa19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 C7orf26Q96N11 449 aa19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 UNKQ9C0B0 810 aaKnown RBP19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 ZNF395Q9H8N7 513 aaPredicted RBP19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 POPDC3Q9HBV1 291 aa19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 XPR1Q9UBH6 696 aa19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 TRBV5-4A0A0C4DH59 114 aa19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 GLYATL1P3A0A0U1RQE8 302 aa19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 LTA4HP09960 611 aaKnown RBP19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 CCDC166P0CW27 439 aa19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 SPAM1P38567 509 aa19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 PTPN5P54829 565 aa19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 OVGP1Q12889 678 aa19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 ITPRIPL2Q3MIP1 535 aa19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 CERS6Q6ZMG9 384 aa19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 SNX20Q7Z614 316 aa19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 ANKS4BQ8N8V4 417 aa19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 RDH11Q8TC12 318 aa19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 SUSD6Q92537 303 aa19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 EPS15L1Q9UBC2 864 aa19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 SARDHQ9UL12 918 aa19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 NUMBLQ9Y6R0 609 aa19.46■□□□□ 0.71
RBFOX1-215ENST00000553186 MUC22E2RYF6 1773 aaPredicted RBP19.45■□□□□ 0.7
RBFOX1-215ENST00000553186 KIAA1549LQ6ZVL6 1849 aa19.45■□□□□ 0.7
RBFOX1-215ENST00000553186 DENND4AQ7Z401 1863 aa19.45■□□□□ 0.7
RBFOX1-215ENST00000553186 BRWD1Q9NSI6 2320 aa19.45■□□□□ 0.7
RBFOX1-215ENST00000553186 UPK3BL1B0FP48 263 aa19.45■□□□□ 0.7
RBFOX1-215ENST00000553186 UPK3BL2E5RIL1 263 aa19.45■□□□□ 0.7
RBFOX1-215ENST00000553186 PFDN6O15212 129 aa19.45■□□□□ 0.7
RBFOX1-215ENST00000553186 KAT7O95251 611 aa19.45■□□□□ 0.7
RBFOX1-215ENST00000553186 C1SP09871 688 aa19.45■□□□□ 0.7
RBFOX1-215ENST00000553186 PTGER3P43115 390 aa19.45■□□□□ 0.7
RBFOX1-215ENST00000553186 STX3Q13277 289 aa19.45■□□□□ 0.7
RBFOX1-215ENST00000553186 CHRNA6Q15825 494 aa19.45■□□□□ 0.7
RBFOX1-215ENST00000553186 FAM83EQ2M2I3 478 aa19.45■□□□□ 0.7
RBFOX1-215ENST00000553186 CTSL3PQ5NE16 218 aa19.45■□□□□ 0.7
RBFOX1-215ENST00000553186 ZYG11AQ6WRX3 759 aa19.45■□□□□ 0.7
RBFOX1-215ENST00000553186 RFLNAQ6ZTI6 216 aa19.45■□□□□ 0.7
RBFOX1-215ENST00000553186 STK40Q8N2I9 435 aa19.45■□□□□ 0.7
RBFOX1-215ENST00000553186 THOC1Q96FV9 657 aaKnown RBP19.45■□□□□ 0.7
RBFOX1-215ENST00000553186 SCYL1Q96KG9 808 aa19.45■□□□□ 0.7
RBFOX1-215ENST00000553186 NECTIN4Q96NY8 510 aa19.45■□□□□ 0.7
RBFOX1-215ENST00000553186 P2RY12Q9H244 342 aa19.45■□□□□ 0.7
RBFOX1-215ENST00000553186 ASB8Q9H765 288 aa19.45■□□□□ 0.7
RBFOX1-215ENST00000553186 PCDH12Q9NPG4 1184 aa19.45■□□□□ 0.7
RBFOX1-215ENST00000553186 EDDM13A0A1B0GTR0 161 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 AGAP14A8MT82 685 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 PKMP14618 531 aaKnown RBP19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 ZNF37AP17032 561 aaPredicted RBP19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 AGAP9Q5VTM2 703 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 MTSS1LQ765P7 747 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 SPATS2Q86XZ4 545 aaKnown RBP19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 PBXIP1Q96AQ6 731 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 MRPL57Q9BQC6 102 aaKnown RBP19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 MRPL46Q9H2W6 279 aaKnown RBP19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 THAP1Q9NVV9 213 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 OXSMQ9NWU1 459 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 MID2Q9UJV3 735 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 ARL2BPQ9Y2Y0 163 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 SCN8AQ9UQD0 1980 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 C16orf96A6NNT2 1141 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 ANHXE9PGG2 379 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 TGDSO95455 350 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 SERPINE1P05121 402 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 RALBP11234 206 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 UGT1A6P19224 532 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 ITGALP20701 1170 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 UGT1A1P22309 533 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 UGT1A4P22310 534 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 UGT1A3P35503 534 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 UGT1A5P35504 534 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 GRIA2P42262 883 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 HTR4Q13639 388 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 ITGA9Q13797 1035 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 POM121L1PQ3SYA9 428 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 ATG14Q6ZNE5 492 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 SERPINA9Q86WD7 417 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 FAM136AQ96C01 138 aa19.44■□□□□ 0.7
RBFOX1-215ENST00000553186 CCDC97Q96F63 343 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms