RNA–Protein interactions for RNA: ENST00000553029.1

LINC02406-201, Transcript of long intergenic non-protein coding RNA 2406, humanhuman

TSL 3 BASIC

Gene LINC02406, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02406-201ENST00000553029 PROM1O43490 865 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 CPNE3O75131 537 aaKnown RBP6.1□□□□□ -1.43
LINC02406-201ENST00000553029 UNC5CO95185 931 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 C9P02748 559 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 FYNP06241 537 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 RAB40ALP0C0E4 278 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 MYCLP1P12525 358 aaPredicted RBP6.1□□□□□ -1.43
LINC02406-201ENST00000553029 SPAM1P38567 509 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 ARCN1P48444 511 aaKnown RBP6.1□□□□□ -1.43
LINC02406-201ENST00000553029 RGS7P49802 495 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 RAD23BP54727 409 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 SNRPFP62306 86 aaKnown RBP6.1□□□□□ -1.43
LINC02406-201ENST00000553029 CTBSQ01459 385 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 RUNX1T1Q06455 604 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 SLC20A2Q08357 652 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 NFATC2Q13469 925 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 TUBB3Q13509 450 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 AUHQ13825 339 aaKnown RBP6.1□□□□□ -1.43
LINC02406-201ENST00000553029 PRKD1Q15139 912 aaPredicted RBP6.1□□□□□ -1.43
LINC02406-201ENST00000553029 TLR1Q15399 786 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 HIF1AQ16665 826 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 FAM69BQ5VUD6 431 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 PWWP2BQ6NUJ5 590 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 GDPD4Q6W3E5 623 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 SV2BQ7L1I2 683 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 CAMKMTQ7Z624 323 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 TECPR1Q7Z6L1 1165 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 SETD3Q86TU7 594 aaPredicted RBP6.1□□□□□ -1.43
LINC02406-201ENST00000553029 SFRP1Q8N474 314 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 SVOPQ8N4V2 548 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 CCDC150Q8NCX0 1101 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 UBA3Q8TBC4 463 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 SH3KBP1Q96B97 665 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 MAGEB10Q96LZ2 347 aaPredicted RBP6.1□□□□□ -1.43
LINC02406-201ENST00000553029 LGR4Q9BXB1 951 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.1□□□□□ -1.43
LINC02406-201ENST00000553029 CHST8Q9H2A9 424 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 ETNK1Q9HBU6 452 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 GDPD2Q9HCC8 539 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 GPAMQ9HCL2 828 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 SARS2Q9NP81 518 aaKnown RBP6.1□□□□□ -1.43
LINC02406-201ENST00000553029 WASH6PQ9NQA3 447 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 DNAJB12Q9NXW2 375 aaKnown RBP6.1□□□□□ -1.43
LINC02406-201ENST00000553029 ST14Q9Y5Y6 855 aa6.1□□□□□ -1.43
LINC02406-201ENST00000553029 MAP1AP78559 2803 aaPredicted RBP6.1□□□□□ -1.43
LINC02406-201ENST00000553029 MXRA5Q9NR99 2828 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 TRBV23OR9-2A0A075B6M9 112 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 EPB41L2O43491 1005 aaKnown RBP6.09□□□□□ -1.43
LINC02406-201ENST00000553029 BUB1BO60566 1050 aaPredicted RBP6.09□□□□□ -1.43
LINC02406-201ENST00000553029 RASSF9O75901 435 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 FBXO21O94952 628 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 TRUB2O95900 331 aaKnown RBP6.09□□□□□ -1.43
LINC02406-201ENST00000553029 GSRP00390 522 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 IGLV3-25P01717 112 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 IGHEP01854 428 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 SLC2A3P11169 496 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 ERCC5P28715 1186 aaPredicted RBP6.09□□□□□ -1.43
LINC02406-201ENST00000553029 CCR1P32246 355 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 TRIM23P36406 574 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 LONP1P36776 959 aaKnown RBP6.09□□□□□ -1.43
LINC02406-201ENST00000553029 LIG3P49916 1009 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 SUOXP51687 545 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 SNRPD1P62314 119 aaKnown RBP6.09□□□□□ -1.43
LINC02406-201ENST00000553029 DLG4P78352 724 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 ARF5P84085 180 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 MYBPHQ13203 477 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 GPS2Q13227 327 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 RPUSD3Q6P087 351 aaKnown RBP6.09□□□□□ -1.43
LINC02406-201ENST00000553029 PRSS42Q7Z5A4 293 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 MRGPREQ86SM8 312 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 SLC9A9Q8IVB4 645 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 C12orf56Q8IXR9 622 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 CCDC65Q8IXS2 484 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 GUF1Q8N442 669 aaKnown RBP6.09□□□□□ -1.43
LINC02406-201ENST00000553029 ACRBPQ8NEB7 543 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 OR7D4Q8NG98 312 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 OR2AP1Q8NGE2 309 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 CA5BP1Q8WTZ4 195 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 VOPP1Q96AW1 172 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 ISG20Q96AZ6 181 aaKnown RBP6.09□□□□□ -1.43
LINC02406-201ENST00000553029 MBD6Q96DN6 1003 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 HMCESQ96FZ2 354 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 RMND5BQ96G75 393 aaPredicted RBP6.09□□□□□ -1.43
LINC02406-201ENST00000553029 COX4I2Q96KJ9 171 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 IP6K3Q96PC2 410 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 TGM7Q96PF1 710 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 GBP5Q96PP8 586 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 SPON2Q9BUD6 331 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 TRIM62Q9BVG3 475 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 NLNQ9BYT8 704 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 MIS12Q9H081 205 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 LIME1Q9H400 295 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 CISHQ9NSE2 258 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 KCNN3Q9UGI6 736 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 SUFUQ9UMX1 484 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 SLC30A1Q9Y6M5 507 aa6.09□□□□□ -1.43
LINC02406-201ENST00000553029 HIVEP2P31629 2446 aa6.08□□□□□ -1.44
LINC02406-201ENST00000553029 LILRA5A6NI73 299 aa6.08□□□□□ -1.44
LINC02406-201ENST00000553029 TEX33O43247 280 aa6.08□□□□□ -1.44
LINC02406-201ENST00000553029 SART1O43290 800 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms