RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 MAXP61244 160 aa12.78□□□□□ -0.36
PTCH1-221ENST00000550914 CYP4F2P78329 520 aa12.78□□□□□ -0.36
PTCH1-221ENST00000550914 PTSQ03393 145 aa12.78□□□□□ -0.36
PTCH1-221ENST00000550914 FILIP1LQ4L180 1135 aa12.78□□□□□ -0.36
PTCH1-221ENST00000550914 DCAF12Q5T6F0 453 aa12.78□□□□□ -0.36
PTCH1-221ENST00000550914 NKAIN2Q5VXU1 208 aa12.78□□□□□ -0.36
PTCH1-221ENST00000550914 E4F1Q66K89 784 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-221ENST00000550914 LRRC66Q68CR7 880 aa12.78□□□□□ -0.36
PTCH1-221ENST00000550914 BORAQ6PGQ7 559 aa12.78□□□□□ -0.36
PTCH1-221ENST00000550914 DOK6Q6PKX4 331 aa12.78□□□□□ -0.36
PTCH1-221ENST00000550914 WDR74Q6RFH5 385 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-221ENST00000550914 GALNT13Q8IUC8 556 aa12.78□□□□□ -0.36
PTCH1-221ENST00000550914 SFRP1Q8N474 314 aa12.78□□□□□ -0.36
PTCH1-221ENST00000550914 IL22RA1Q8N6P7 574 aa12.78□□□□□ -0.36
PTCH1-221ENST00000550914 EXD1Q8NHP7 514 aa12.78□□□□□ -0.36
PTCH1-221ENST00000550914 HSPH1Q92598 858 aa12.78□□□□□ -0.36
PTCH1-221ENST00000550914 ART4Q93070 314 aa12.78□□□□□ -0.36
PTCH1-221ENST00000550914 FATE1Q969F0 183 aa12.78□□□□□ -0.36
PTCH1-221ENST00000550914 COX14Q96I36 57 aa12.78□□□□□ -0.36
PTCH1-221ENST00000550914 CATSPER2Q96P56 530 aa12.78□□□□□ -0.36
PTCH1-221ENST00000550914 POLR1EQ9GZS1 481 aaKnown RBP12.78□□□□□ -0.36
PTCH1-221ENST00000550914 NT5MQ9NPB1 228 aa12.78□□□□□ -0.36
PTCH1-221ENST00000550914 HAUS2Q9NVX0 235 aa12.78□□□□□ -0.36
PTCH1-221ENST00000550914 SLC39A1Q9NY26 324 aa12.78□□□□□ -0.36
PTCH1-221ENST00000550914 VPS18Q9P253 973 aa12.78□□□□□ -0.36
PTCH1-221ENST00000550914 MYO1AQ9UBC5 1043 aa12.78□□□□□ -0.36
PTCH1-221ENST00000550914 B3GALT1Q9Y5Z6 326 aa12.78□□□□□ -0.36
PTCH1-221ENST00000550914 SPTAN1Q13813 2472 aaKnown RBP12.77□□□□□ -0.37
PTCH1-221ENST00000550914 ZNF891A8MT65 544 aaPredicted RBP12.77□□□□□ -0.37
PTCH1-221ENST00000550914 SMTNL1A8MU46 457 aa12.77□□□□□ -0.37
PTCH1-221ENST00000550914 GOLGA6L22H0YM25 854 aa12.77□□□□□ -0.37
PTCH1-221ENST00000550914 DUX1O43812 170 aa12.77□□□□□ -0.37
PTCH1-221ENST00000550914 TCF4P15884 667 aa12.77□□□□□ -0.37
PTCH1-221ENST00000550914 CTPS1P17812 591 aa12.77□□□□□ -0.37
PTCH1-221ENST00000550914 CA4P22748 312 aa12.77□□□□□ -0.37
PTCH1-221ENST00000550914 STC1P52823 247 aa12.77□□□□□ -0.37
PTCH1-221ENST00000550914 RPL26P61254 145 aaKnown RBP12.77□□□□□ -0.37
PTCH1-221ENST00000550914 SLC25A11Q02978 314 aaKnown RBP12.77□□□□□ -0.37
PTCH1-221ENST00000550914 TYRO3Q06418 890 aa12.77□□□□□ -0.37
PTCH1-221ENST00000550914 CLCA4Q14CN2 919 aa12.77□□□□□ -0.37
PTCH1-221ENST00000550914 FIGNQ5HY92 759 aa12.77□□□□□ -0.37
PTCH1-221ENST00000550914 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.77□□□□□ -0.37
PTCH1-221ENST00000550914 CCDC183Q5T5S1 534 aa12.77□□□□□ -0.37
PTCH1-221ENST00000550914 CACNA2D3Q8IZS8 1091 aa12.77□□□□□ -0.37
PTCH1-221ENST00000550914 BMPERQ8N8U9 685 aa12.77□□□□□ -0.37
PTCH1-221ENST00000550914 OR10G6Q8NH81 332 aa12.77□□□□□ -0.37
PTCH1-221ENST00000550914 FAM71BQ8TC56 605 aa12.77□□□□□ -0.37
PTCH1-221ENST00000550914 SLC37A2Q8TED4 501 aa12.77□□□□□ -0.37
PTCH1-221ENST00000550914 MAML1Q92585 1016 aa12.77□□□□□ -0.37
PTCH1-221ENST00000550914 SCAMP4Q969E2 229 aa12.77□□□□□ -0.37
PTCH1-221ENST00000550914 PMEPA1Q969W9 287 aa12.77□□□□□ -0.37
PTCH1-221ENST00000550914 AHCYL2Q96HN2 611 aaKnown RBP12.77□□□□□ -0.37
PTCH1-221ENST00000550914 LYSMD1Q96S90 227 aa12.77□□□□□ -0.37
PTCH1-221ENST00000550914 ZPBPQ9BS86 351 aa12.77□□□□□ -0.37
PTCH1-221ENST00000550914 SARS2Q9NP81 518 aaKnown RBP12.77□□□□□ -0.37
PTCH1-221ENST00000550914 IP6K2Q9UHH9 426 aa12.77□□□□□ -0.37
PTCH1-221ENST00000550914 CD84Q9UIB8 345 aa12.77□□□□□ -0.37
PTCH1-221ENST00000550914 RPL26L1Q9UNX3 145 aaKnown RBP12.77□□□□□ -0.37
PTCH1-221ENST00000550914 TMEM98Q9Y2Y6 226 aa12.77□□□□□ -0.37
PTCH1-221ENST00000550914 USP9XQ93008 2570 aaPredicted RBP12.76□□□□□ -0.37
PTCH1-221ENST00000550914 A0A1B0GTH6 734 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 MBD3O95983 291 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 SLC2A4P14672 509 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 LIFP15018 202 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 IL4RP24394 825 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 MAN1A1P33908 653 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 GARSP41250 739 aaKnown RBP12.76□□□□□ -0.37
PTCH1-221ENST00000550914 EPHB1P54762 984 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 EPHA4P54764 986 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 NFKB2Q00653 900 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 GALNT2Q10471 571 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 PTPRRQ15256 657 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 TXNRD3NBQ6F5E7 133 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 TIGD7Q6NT04 549 aaPredicted RBP12.76□□□□□ -0.37
PTCH1-221ENST00000550914 RFLNAQ6ZTI6 216 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 ARHGAP22Q7Z5H3 698 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 FAM129CQ86XR2 697 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 AVL9Q8NBF6 648 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 JPH3Q8WXH2 748 aaPredicted RBP12.76□□□□□ -0.37
PTCH1-221ENST00000550914 SH3KBP1Q96B97 665 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 SLC45A3Q96JT2 553 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 TSGA13Q96PP4 275 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 SLC38A3Q99624 504 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 EFHD1Q9BUP0 239 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 SPRY4Q9C004 299 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 TRIM4Q9C037 500 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 EPB41L1Q9H4G0 881 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 STN1Q9H668 368 aaKnown RBP12.76□□□□□ -0.37
PTCH1-221ENST00000550914 RMI1Q9H9A7 625 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 OCIAD1Q9NX40 245 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 TMEM9Q9P0T7 183 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 PILRAQ9UKJ1 303 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 PLEKHM1Q9Y4G2 1056 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 BZW2Q9Y6E2 419 aaKnown RBP12.76□□□□□ -0.37
PTCH1-221ENST00000550914 RELNP78509 3460 aa12.76□□□□□ -0.37
PTCH1-221ENST00000550914 SPTBN1Q01082 2364 aaKnown RBP12.76□□□□□ -0.37
PTCH1-221ENST00000550914 RGSL1A5PLK6 1076 aa12.75□□□□□ -0.37
PTCH1-221ENST00000550914 EFCAB7A8K855 629 aa12.75□□□□□ -0.37
PTCH1-221ENST00000550914 MATN3O15232 486 aa12.75□□□□□ -0.37
PTCH1-221ENST00000550914 RAD1O60671 282 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms