RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 LRRC26Q2I0M4 334 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 PIGWQ7Z7B1 504 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 CLP1Q92989 425 aaKnown RBP12.16□□□□□ -0.46
NR4A1-215ENST00000550557 TADA1Q96BN2 335 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 NELL2Q99435 816 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 OSBPL2Q9H1P3 480 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 PAPOLBQ9NRJ5 636 aaKnown RBP12.16□□□□□ -0.46
NR4A1-215ENST00000550557 TBC1D23Q9NUY8 699 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 LAMB2P55268 1798 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 TGM5O43548 720 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 AKAP10O43572 662 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 GNPDA1P46926 289 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 CACNA2D1P54289 1103 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 CACNG1Q06432 222 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 BNIP1Q12981 228 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 TCEAL1Q15170 157 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 CLEC4FQ8N1N0 589 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 ZFP28Q8NHY6 868 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 EME1Q96AY2 570 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 WDR6Q9NNW5 1121 aaKnown RBP12.16□□□□□ -0.46
NR4A1-215ENST00000550557 MTRRQ9UBK8 725 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 PSMD13Q9UNM6 376 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 NR5A2O00482 541 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 UBDO15205 165 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 UQCRBP14927 111 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 ATP6V0D1P61421 351 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 RPL6Q02878 288 aaKnown RBP12.16□□□□□ -0.46
NR4A1-215ENST00000550557 CYLC2Q14093 348 aaPredicted RBP12.16□□□□□ -0.46
NR4A1-215ENST00000550557 PLEKHG4Q58EX7 1191 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 XKR4Q5GH76 650 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 TMEM220Q6QAJ8 160 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 ZDHHC24Q6UX98 284 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 CYP4Z1Q86W10 505 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 PLD5Q8N7P1 536 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 PTGR2Q8N8N7 351 aaPredicted RBP12.16□□□□□ -0.46
NR4A1-215ENST00000550557 ZNF555Q8NEP9 628 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 BRSK1Q8TDC3 778 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 STYXQ8WUJ0 223 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 NKD2Q969F2 451 aaPredicted RBP12.16□□□□□ -0.46
NR4A1-215ENST00000550557 FAM120BQ96EK7 910 aaKnown RBP12.16□□□□□ -0.46
NR4A1-215ENST00000550557 TWNKQ96RR1 684 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 POMKQ9H5K3 350 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 TMCO1Q9UM00 188 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 B4DGG1 531 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 WDR47O94967 919 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 DLDP09622 509 aaKnown RBP12.16□□□□□ -0.46
NR4A1-215ENST00000550557 PKMP14618 531 aaKnown RBP12.16□□□□□ -0.46
NR4A1-215ENST00000550557 MINDY4Q4G0A6 757 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 UBXN11Q5T124 520 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 C2orf73Q8N5S3 287 aaPredicted RBP12.16□□□□□ -0.46
NR4A1-215ENST00000550557 OR2AP1Q8NGE2 309 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 TMEM40Q8WWA1 233 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 NUS1Q96E22 293 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 LMLNQ96KR4 655 aa12.16□□□□□ -0.46
NR4A1-215ENST00000550557 FKBP6O75344 327 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 ERAL1O75616 437 aaKnown RBP12.15□□□□□ -0.46
NR4A1-215ENST00000550557 HLA-EP13747 358 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 TRPC1P48995 793 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 CCR3P51677 355 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 FAAP100Q0VG06 881 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 PRKG2Q13237 762 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 TRABD2AQ86V40 505 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 TTC29Q8NA56 475 aaPredicted RBP12.15□□□□□ -0.46
NR4A1-215ENST00000550557 SMOQ99835 787 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 TTLL2Q9BWV7 592 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 R3HDMLQ9H3Y0 253 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 PNPLA8Q9NP80 782 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 CYP8B1Q9UNU6 501 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 TNFP01375 233 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 PTDSS1P48651 473 aaKnown RBP12.15□□□□□ -0.46
NR4A1-215ENST00000550557 RAB33AQ14088 237 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 CERCAMQ5T4B2 595 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 CDK20Q8IZL9 346 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 TOP1MTQ969P6 601 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 KLHDC7BQ96G42 594 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 EBNA1BP2Q99848 306 aaKnown RBP12.15□□□□□ -0.46
NR4A1-215ENST00000550557 AIF1LQ9BQI0 150 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 SRMSQ9H3Y6 488 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 SYBUQ9NX95 663 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 TCRBV21S2A2A0A5A6 115 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 SERPINI2O75830 405 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 PSMG1O95456 288 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 HNRNPCP07910 306 aaKnown RBP eCLIP12.15□□□□□ -0.46
NR4A1-215ENST00000550557 EPCAMP16422 314 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 SEMG2Q02383 582 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 PHF19Q5T6S3 580 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 CPNE8Q86YQ8 564 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 CAMK1DQ8IU85 385 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 STX19Q8N4C7 294 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 SLCO2A1Q92959 643 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 ACSS3Q9H6R3 686 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 CRTAC1Q9NQ79 661 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 FZD10Q9ULW2 581 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 VWA7Q9Y334 891 aa12.15□□□□□ -0.46
NR4A1-215ENST00000550557 A8MUI8 341 aa12.14□□□□□ -0.47
NR4A1-215ENST00000550557 HCRTO43612 131 aa12.14□□□□□ -0.47
NR4A1-215ENST00000550557 CMPK1P30085 196 aa12.14□□□□□ -0.47
NR4A1-215ENST00000550557 SERPINB5P36952 375 aa12.14□□□□□ -0.47
NR4A1-215ENST00000550557 CDKN2BP42772 138 aa12.14□□□□□ -0.47
NR4A1-215ENST00000550557 MSLNQ13421 630 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms