RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 MAP9Q49MG5 647 aa10.82□□□□□ -0.68
VTI1BP3-201ENST00000550220 PYCR3Q53H96 274 aa10.82□□□□□ -0.68
VTI1BP3-201ENST00000550220 TAF1BQ53T94 588 aaPredicted RBP10.82□□□□□ -0.68
VTI1BP3-201ENST00000550220 ARHGAP40Q5TG30 622 aa10.82□□□□□ -0.68
VTI1BP3-201ENST00000550220 SLC9A4Q6AI14 798 aa10.82□□□□□ -0.68
VTI1BP3-201ENST00000550220 CCDC70Q6NSX1 233 aa10.82□□□□□ -0.68
VTI1BP3-201ENST00000550220 SLC30A9Q6PML9 568 aa10.82□□□□□ -0.68
VTI1BP3-201ENST00000550220 CCDC81Q6ZN84 652 aa10.82□□□□□ -0.68
VTI1BP3-201ENST00000550220 NYAP1Q6ZVC0 841 aa10.82□□□□□ -0.68
VTI1BP3-201ENST00000550220 B3GNT8Q7Z7M8 397 aa10.82□□□□□ -0.68
VTI1BP3-201ENST00000550220 NT5DC3Q86UY8 548 aa10.82□□□□□ -0.68
VTI1BP3-201ENST00000550220 RHOT1Q8IXI2 618 aa10.82□□□□□ -0.68
VTI1BP3-201ENST00000550220 AVL9Q8NBF6 648 aa10.82□□□□□ -0.68
VTI1BP3-201ENST00000550220 CCDC112Q8NEF3 446 aa10.82□□□□□ -0.68
VTI1BP3-201ENST00000550220 LPCAT1Q8NF37 534 aa10.82□□□□□ -0.68
VTI1BP3-201ENST00000550220 SCAMP4Q969E2 229 aa10.82□□□□□ -0.68
VTI1BP3-201ENST00000550220 SH3KBP1Q96B97 665 aa10.82□□□□□ -0.68
VTI1BP3-201ENST00000550220 CCNL2Q96S94 520 aaPredicted RBP10.82□□□□□ -0.68
VTI1BP3-201ENST00000550220 RIOK2Q9BVS4 552 aaKnown RBP10.82□□□□□ -0.68
VTI1BP3-201ENST00000550220 PACSIN1Q9BY11 444 aa10.82□□□□□ -0.68
VTI1BP3-201ENST00000550220 FOXP3Q9BZS1 431 aa10.82□□□□□ -0.68
VTI1BP3-201ENST00000550220 TSPY26PQ9H489 355 aa10.82□□□□□ -0.68
VTI1BP3-201ENST00000550220 STN1Q9H668 368 aaKnown RBP10.82□□□□□ -0.68
VTI1BP3-201ENST00000550220 PCDHB11Q9Y5F2 797 aa10.82□□□□□ -0.68
VTI1BP3-201ENST00000550220 HEY1Q9Y5J3 304 aa10.82□□□□□ -0.68
VTI1BP3-201ENST00000550220 C1orf232A0A0U1RR37 186 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 GPR89AB7ZAQ6 455 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 K7ENP7 123 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 MTSS1O43312 755 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 B4GAT1O43505 415 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 CLDN7O95471 211 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 ASMTLO95671 621 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 SOD1P00441 154 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 GPR89BP0CG08 455 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 ACTR1BP42025 376 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 CD86P42081 329 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 POLD2P49005 469 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 SPINT3P49223 89 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 ACTR1AP61163 376 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 NIPAL4Q0D2K0 466 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 AP1B1Q10567 949 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 SLC10A2Q12908 348 aaPredicted RBP10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 TFDP2Q14188 446 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 QPCTQ16769 361 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 AMZ1Q400G9 498 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 PHF19Q5T6S3 580 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 PDPK2PQ6A1A2 396 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 INO80CQ6PI98 192 aaPredicted RBP10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 DOK6Q6PKX4 331 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 XKR5Q6UX68 686 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 JAMLQ86YT9 394 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 SLITRK4Q8IW52 837 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 PLD5Q8N7P1 536 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 OR4D9Q8NGE8 314 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 COX14Q96I36 57 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 SLC25A51Q9H1U9 297 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 ZFYVE1Q9HBF4 777 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 MAGEE1Q9HCI5 957 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 LUC7LQ9NQ29 371 aaKnown RBP10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 PISDQ9UG56 409 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 CD84Q9UIB8 345 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 ATXN7L1Q9ULK2 861 aaPredicted RBP10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 TMEM98Q9Y2Y6 226 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 IGSF10Q6WRI0 2623 aa10.81□□□□□ -0.68
VTI1BP3-201ENST00000550220 OR5K4A6NMS3 321 aa10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 AKR1B15C9JRZ8 316 aaPredicted RBP10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 KCNK1O00180 336 aa10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 MAP3K6O95382 1288 aa10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 LIPCP11150 499 aa10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 AK4P27144 223 aaPredicted RBP10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 TNNT3P45378 269 aaPredicted RBP10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 FASLGP48023 281 aa10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 MAZP56270 477 aaKnown RBP10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 OR1D5P58170 312 aa10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 CLN3Q13286 438 aa10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 USP53Q70EK8 1073 aa10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 NAGSQ8N159 534 aa10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 ZSCAN1Q8NBB4 408 aa10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 OR10G6Q8NH81 332 aa10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 IMP4Q96G21 291 aaKnown RBP10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 CALR3Q96L12 384 aaKnown RBP10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 SLC38A3Q99624 504 aa10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 CHP1Q99653 195 aa10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 HERPUD2Q9BSE4 406 aa10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 ZSCAN5AQ9BUG6 496 aa10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 CARD9Q9H257 536 aa10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 EPB41L1Q9H4G0 881 aa10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 SUDS3Q9H7L9 328 aaPredicted RBP10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 CPNE5Q9HCH3 593 aa10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 KCNK4Q9NYG8 393 aa10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 ZNHIT2Q9UHR6 403 aa10.8□□□□□ -0.68
VTI1BP3-201ENST00000550220 AHCTF1Q8WYP5 2266 aa10.79□□□□□ -0.68
VTI1BP3-201ENST00000550220 C3orf70A6NLC5 250 aaPredicted RBP10.79□□□□□ -0.68
VTI1BP3-201ENST00000550220 PSTPIP1O43586 416 aa10.79□□□□□ -0.68
VTI1BP3-201ENST00000550220 SPOPO43791 374 aa10.79□□□□□ -0.68
VTI1BP3-201ENST00000550220 EPOP01588 193 aa10.79□□□□□ -0.68
VTI1BP3-201ENST00000550220 KRT1P04264 644 aa10.79□□□□□ -0.68
VTI1BP3-201ENST00000550220 MMP2P08253 660 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms