RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 OR2M4Q96R27 311 aa16.25■□□□□ 0.19
VPS29-207ENST00000549970 UBL7Q96S82 380 aaPredicted RBP16.25■□□□□ 0.19
VPS29-207ENST00000549970 LYSMD1Q96S90 227 aa16.25■□□□□ 0.19
VPS29-207ENST00000549970 MLPHQ9BV36 600 aaPredicted RBP16.25■□□□□ 0.19
VPS29-207ENST00000549970 MGAQ8IWI9 3026 aa16.24■□□□□ 0.19
VPS29-207ENST00000549970 RHPN2P1A8MT19 583 aa16.24■□□□□ 0.19
VPS29-207ENST00000549970 ANKRD66B4E2M5 251 aa16.24■□□□□ 0.19
VPS29-207ENST00000549970 PPP1R12AO14974 1030 aaPredicted RBP16.24■□□□□ 0.19
VPS29-207ENST00000549970 ASMTLO95671 621 aa16.24■□□□□ 0.19
VPS29-207ENST00000549970 PYGLP06737 847 aa16.24■□□□□ 0.19
VPS29-207ENST00000549970 ITGA2BP08514 1039 aa16.24■□□□□ 0.19
VPS29-207ENST00000549970 HGFP14210 728 aa16.24■□□□□ 0.19
VPS29-207ENST00000549970 ZFXP17010 805 aaPredicted RBP16.24■□□□□ 0.19
VPS29-207ENST00000549970 COMTP21964 271 aa16.24■□□□□ 0.19
VPS29-207ENST00000549970 CCKBRP32239 447 aa16.24■□□□□ 0.19
VPS29-207ENST00000549970 EIF3IQ13347 325 aaKnown RBP16.24■□□□□ 0.19
VPS29-207ENST00000549970 AMZ1Q400G9 498 aa16.24■□□□□ 0.19
VPS29-207ENST00000549970 MAP9Q49MG5 647 aa16.24■□□□□ 0.19
VPS29-207ENST00000549970 MFSD7Q6UXD7 560 aa16.24■□□□□ 0.19
VPS29-207ENST00000549970 KDELC2Q7Z4H8 507 aa16.24■□□□□ 0.19
VPS29-207ENST00000549970 NLRP8Q86W28 1048 aa16.24■□□□□ 0.19
VPS29-207ENST00000549970 EXD1Q8NHP7 514 aa16.24■□□□□ 0.19
VPS29-207ENST00000549970 OLFM3Q96PB7 478 aa16.24■□□□□ 0.19
VPS29-207ENST00000549970 DPH1Q9BZG8 443 aa16.24■□□□□ 0.19
VPS29-207ENST00000549970 TRIM5Q9C035 493 aa16.24■□□□□ 0.19
VPS29-207ENST00000549970 CPNE5Q9HCH3 593 aa16.24■□□□□ 0.19
VPS29-207ENST00000549970 DDX56Q9NY93 547 aaKnown RBP16.24■□□□□ 0.19
VPS29-207ENST00000549970 INTUQ9ULD6 942 aa16.24■□□□□ 0.19
VPS29-207ENST00000549970 JMJD7P0C870 316 aa16.23■□□□□ 0.19
VPS29-207ENST00000549970 ALDH4A1P30038 563 aa16.23■□□□□ 0.19
VPS29-207ENST00000549970 UGT1A5P35504 534 aa16.23■□□□□ 0.19
VPS29-207ENST00000549970 MLLT3P42568 568 aaPredicted RBP16.23■□□□□ 0.19
VPS29-207ENST00000549970 NOP2P46087 812 aaKnown RBP16.23■□□□□ 0.19
VPS29-207ENST00000549970 SPINT3P49223 89 aa16.23■□□□□ 0.19
VPS29-207ENST00000549970 TMPRSS3P57727 454 aa16.23■□□□□ 0.19
VPS29-207ENST00000549970 OR1D5P58170 312 aa16.23■□□□□ 0.19
VPS29-207ENST00000549970 B4GALNT1Q00973 533 aa16.23■□□□□ 0.19
VPS29-207ENST00000549970 LLGL1Q15334 1064 aa16.23■□□□□ 0.19
VPS29-207ENST00000549970 PCSK7Q16549 785 aa16.23■□□□□ 0.19
VPS29-207ENST00000549970 PYCR3Q53H96 274 aa16.23■□□□□ 0.19
VPS29-207ENST00000549970 TMPRSS9Q7Z410 1059 aa16.23■□□□□ 0.19
VPS29-207ENST00000549970 CLEC14AQ86T13 490 aa16.23■□□□□ 0.19
VPS29-207ENST00000549970 NT5DC3Q86UY8 548 aa16.23■□□□□ 0.19
VPS29-207ENST00000549970 C17orf82Q86X59 251 aaPredicted RBP16.23■□□□□ 0.19
VPS29-207ENST00000549970 JAMLQ86YT9 394 aa16.23■□□□□ 0.19
VPS29-207ENST00000549970 GALNT13Q8IUC8 556 aa16.23■□□□□ 0.19
VPS29-207ENST00000549970 NAGSQ8N159 534 aa16.23■□□□□ 0.19
VPS29-207ENST00000549970 CCHCR1Q8TD31 782 aa16.23■□□□□ 0.19
VPS29-207ENST00000549970 SCARF2Q96GP6 870 aaPredicted RBP16.23■□□□□ 0.19
VPS29-207ENST00000549970 COX14Q96I36 57 aa16.23■□□□□ 0.19
VPS29-207ENST00000549970 WDR24Q96S15 920 aa16.23■□□□□ 0.19
VPS29-207ENST00000549970 ADGRE3Q9BY15 652 aa16.23■□□□□ 0.19
VPS29-207ENST00000549970 GOLPH3Q9H4A6 298 aa16.23■□□□□ 0.19
VPS29-207ENST00000549970 RDH14Q9HBH5 336 aa16.23■□□□□ 0.19
VPS29-207ENST00000549970 WDR70Q9NW82 654 aa16.23■□□□□ 0.19
VPS29-207ENST00000549970 PKD2L2Q9NZM6 624 aa16.23■□□□□ 0.19
VPS29-207ENST00000549970 PISDQ9UG56 409 aa16.23■□□□□ 0.19
VPS29-207ENST00000549970 LOXL2Q9Y4K0 774 aa16.23■□□□□ 0.19
VPS29-207ENST00000549970 ZFC3H1O60293 1989 aaKnown RBP16.22■□□□□ 0.19
VPS29-207ENST00000549970 B4GAT1O43505 415 aa16.22■□□□□ 0.19
VPS29-207ENST00000549970 SLC4A1P02730 911 aa16.22■□□□□ 0.19
VPS29-207ENST00000549970 ATP1A1P05023 1023 aaKnown RBP16.22■□□□□ 0.19
VPS29-207ENST00000549970 MAGEA1P43355 309 aa16.22■□□□□ 0.19
VPS29-207ENST00000549970 UCNP55089 124 aa16.22■□□□□ 0.19
VPS29-207ENST00000549970 ZFP36L1Q07352 338 aaKnown RBP16.22■□□□□ 0.19
VPS29-207ENST00000549970 PEX6Q13608 980 aa16.22■□□□□ 0.19
VPS29-207ENST00000549970 TCEAL1Q15170 157 aa16.22■□□□□ 0.19
VPS29-207ENST00000549970 PHF19Q5T6S3 580 aa16.22■□□□□ 0.19
VPS29-207ENST00000549970 HENMT1Q5T8I9 393 aaKnown RBP16.22■□□□□ 0.19
VPS29-207ENST00000549970 ARHGAP40Q5TG30 622 aa16.22■□□□□ 0.19
VPS29-207ENST00000549970 KAZNQ674X7 775 aa16.22■□□□□ 0.19
VPS29-207ENST00000549970 SARM1Q6SZW1 724 aa16.22■□□□□ 0.19
VPS29-207ENST00000549970 LYSMD3Q7Z3D4 306 aa16.22■□□□□ 0.19
VPS29-207ENST00000549970 RAVER1Q8IY67 606 aaKnown RBP16.22■□□□□ 0.19
VPS29-207ENST00000549970 TC2NQ8N9U0 490 aa16.22■□□□□ 0.19
VPS29-207ENST00000549970 CCDC97Q96F63 343 aaPredicted RBP16.22■□□□□ 0.19
VPS29-207ENST00000549970 IMP4Q96G21 291 aaKnown RBP16.22■□□□□ 0.19
VPS29-207ENST00000549970 BRD8Q9H0E9 1235 aa16.22■□□□□ 0.19
VPS29-207ENST00000549970 SLC25A51Q9H1U9 297 aa16.22■□□□□ 0.19
VPS29-207ENST00000549970 SEMA6CQ9H3T2 930 aa16.22■□□□□ 0.19
VPS29-207ENST00000549970 FAM83DQ9H4H8 585 aa16.22■□□□□ 0.19
VPS29-207ENST00000549970 SAE1Q9UBE0 346 aaPredicted RBP16.22■□□□□ 0.19
VPS29-207ENST00000549970 ZNHIT2Q9UHR6 403 aa16.22■□□□□ 0.19
VPS29-207ENST00000549970 PRKAB1Q9Y478 270 aa16.22■□□□□ 0.19
VPS29-207ENST00000549970 PCYT1BQ9Y5K3 369 aaPredicted RBP16.22■□□□□ 0.19
VPS29-207ENST00000549970 OAS3Q9Y6K5 1087 aaKnown RBP16.22■□□□□ 0.19
VPS29-207ENST00000549970 SCN8AQ9UQD0 1980 aa16.21■□□□□ 0.19
VPS29-207ENST00000549970 TEX51A0A1B0GUA7 166 aa16.21■□□□□ 0.19
VPS29-207ENST00000549970 FADS2P1A8MWK0 482 aa16.21■□□□□ 0.19
VPS29-207ENST00000549970 PSTPIP1O43586 416 aa16.21■□□□□ 0.19
VPS29-207ENST00000549970 PIRTP0C851 137 aa16.21■□□□□ 0.19
VPS29-207ENST00000549970 ITIH1P19827 911 aa16.21■□□□□ 0.19
VPS29-207ENST00000549970 SLC5A2P31639 672 aa16.21■□□□□ 0.19
VPS29-207ENST00000549970 CDKN2BP42772 138 aa16.21■□□□□ 0.19
VPS29-207ENST00000549970 USP53Q70EK8 1073 aa16.21■□□□□ 0.19
VPS29-207ENST00000549970 ZNF438Q7Z4V0 828 aa16.21■□□□□ 0.19
VPS29-207ENST00000549970 PIM3Q86V86 326 aa16.21■□□□□ 0.19
VPS29-207ENST00000549970 SLITRK4Q8IW52 837 aa16.21■□□□□ 0.19
VPS29-207ENST00000549970 TRIB3Q96RU7 358 aa16.21■□□□□ 0.19
VPS29-207ENST00000549970 NUDT22Q9BRQ3 303 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms