RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 ZNF217O75362 1048 aa17.32■□□□□ 0.36
LETMD1-220ENST00000549686 PCDH8O95206 1070 aa17.32■□□□□ 0.36
LETMD1-220ENST00000549686 APBB3O95704 486 aa17.32■□□□□ 0.36
LETMD1-220ENST00000549686 C6P13671 934 aa17.32■□□□□ 0.36
LETMD1-220ENST00000549686 SLC1A2P43004 574 aa17.32■□□□□ 0.36
LETMD1-220ENST00000549686 CD151P48509 253 aa17.32■□□□□ 0.36
LETMD1-220ENST00000549686 POLD2P49005 469 aa17.32■□□□□ 0.36
LETMD1-220ENST00000549686 ADPRHP54922 357 aa17.32■□□□□ 0.36
LETMD1-220ENST00000549686 TAS2R38P59533 333 aa17.32■□□□□ 0.36
LETMD1-220ENST00000549686 NFATC2Q13469 925 aa17.32■□□□□ 0.36
LETMD1-220ENST00000549686 AGERQ15109 404 aa17.32■□□□□ 0.36
LETMD1-220ENST00000549686 MAP7D1Q3KQU3 841 aa17.32■□□□□ 0.36
LETMD1-220ENST00000549686 ZRANB3Q5FWF4 1079 aa17.32■□□□□ 0.36
LETMD1-220ENST00000549686 AGBL2Q5U5Z8 902 aa17.32■□□□□ 0.36
LETMD1-220ENST00000549686 PGBD3Q8N328 593 aa17.32■□□□□ 0.36
LETMD1-220ENST00000549686 TRAM1L1Q8N609 369 aa17.32■□□□□ 0.36
LETMD1-220ENST00000549686 GPR26Q8NDV2 337 aa17.32■□□□□ 0.36
LETMD1-220ENST00000549686 OR14C36Q8NHC7 312 aa17.32■□□□□ 0.36
LETMD1-220ENST00000549686 ZNF398Q8TD17 642 aa17.32■□□□□ 0.36
LETMD1-220ENST00000549686 HMGB4Q8WW32 186 aa17.32■□□□□ 0.36
LETMD1-220ENST00000549686 UHRF1Q96T88 793 aaPredicted RBP17.32■□□□□ 0.36
LETMD1-220ENST00000549686 RBBP8Q99708 897 aa17.32■□□□□ 0.36
LETMD1-220ENST00000549686 C1QTNF7Q9BXJ2 289 aa17.32■□□□□ 0.36
LETMD1-220ENST00000549686 RHOJQ9H4E5 214 aa17.32■□□□□ 0.36
LETMD1-220ENST00000549686 SMOXQ9NWM0 555 aa17.32■□□□□ 0.36
LETMD1-220ENST00000549686 USP36Q9P275 1121 aaKnown RBP17.32■□□□□ 0.36
LETMD1-220ENST00000549686 SERGEFQ9UGK8 458 aa17.32■□□□□ 0.36
LETMD1-220ENST00000549686 TRBV5-4A0A0C4DH59 114 aa17.31■□□□□ 0.36
LETMD1-220ENST00000549686 A0A0U1RQS6 177 aa17.31■□□□□ 0.36
LETMD1-220ENST00000549686 AGAP14A8MT82 685 aa17.31■□□□□ 0.36
LETMD1-220ENST00000549686 TM7SF2O76062 418 aa17.31■□□□□ 0.36
LETMD1-220ENST00000549686 SNRPAP09012 282 aaKnown RBP17.31■□□□□ 0.36
LETMD1-220ENST00000549686 ETV3P41162 512 aa17.31■□□□□ 0.36
LETMD1-220ENST00000549686 TPMTP51580 245 aa17.31■□□□□ 0.36
LETMD1-220ENST00000549686 CCR3P51677 355 aa17.31■□□□□ 0.36
LETMD1-220ENST00000549686 LIMK2P53671 638 aa17.31■□□□□ 0.36
LETMD1-220ENST00000549686 DPTQ07507 201 aa17.31■□□□□ 0.36
LETMD1-220ENST00000549686 FAM151BQ6UXP7 276 aa17.31■□□□□ 0.36
LETMD1-220ENST00000549686 Q6ZVL8 140 aa17.31■□□□□ 0.36
LETMD1-220ENST00000549686 DENND6AQ8IWF6 608 aa17.31■□□□□ 0.36
LETMD1-220ENST00000549686 FLCNQ8NFG4 579 aa17.31■□□□□ 0.36
LETMD1-220ENST00000549686 HEXDCQ8WVB3 486 aa17.31■□□□□ 0.36
LETMD1-220ENST00000549686 ASB12Q8WXK4 309 aa17.31■□□□□ 0.36
LETMD1-220ENST00000549686 MRRFQ96E11 262 aaKnown RBP17.31■□□□□ 0.36
LETMD1-220ENST00000549686 NUS1Q96E22 293 aa17.31■□□□□ 0.36
LETMD1-220ENST00000549686 NECAB3Q96P71 396 aaPredicted RBP17.31■□□□□ 0.36
LETMD1-220ENST00000549686 BTBD1Q9H0C5 482 aa17.31■□□□□ 0.36
LETMD1-220ENST00000549686 SLC6A17Q9H1V8 727 aa17.31■□□□□ 0.36
LETMD1-220ENST00000549686 ASB8Q9H765 288 aa17.31■□□□□ 0.36
LETMD1-220ENST00000549686 SENP1Q9P0U3 644 aa17.31■□□□□ 0.36
LETMD1-220ENST00000549686 OR51F1A6NGY5 319 aa17.3■□□□□ 0.36
LETMD1-220ENST00000549686 LRRC72A6NJI9 287 aa17.3■□□□□ 0.36
LETMD1-220ENST00000549686 HMGB1P1B2RPK0 211 aaPredicted RBP17.3■□□□□ 0.36
LETMD1-220ENST00000549686 GAPDHSO14556 408 aaPredicted RBP17.3■□□□□ 0.36
LETMD1-220ENST00000549686 MMP20O60882 483 aa17.3■□□□□ 0.36
LETMD1-220ENST00000549686 NDUFS3O75489 264 aa17.3■□□□□ 0.36
LETMD1-220ENST00000549686 PIAS1O75925 651 aa17.3■□□□□ 0.36
LETMD1-220ENST00000549686 RECQL5O94762 991 aaPredicted RBP17.3■□□□□ 0.36
LETMD1-220ENST00000549686 CLCN5P51795 746 aa17.3■□□□□ 0.36
LETMD1-220ENST00000549686 ADARP55265 1226 aaKnown RBP17.3■□□□□ 0.36
LETMD1-220ENST00000549686 CTBP1Q13363 440 aa17.3■□□□□ 0.36
LETMD1-220ENST00000549686 ITIH4Q14624 930 aa17.3■□□□□ 0.36
LETMD1-220ENST00000549686 TMED2Q15363 201 aa17.3■□□□□ 0.36
LETMD1-220ENST00000549686 CHRNA6Q15825 494 aa17.3■□□□□ 0.36
LETMD1-220ENST00000549686 HENMT1Q5T8I9 393 aaKnown RBP17.3■□□□□ 0.36
LETMD1-220ENST00000549686 ANO7Q6IWH7 933 aa17.3■□□□□ 0.36
LETMD1-220ENST00000549686 TAS2R42Q7RTR8 314 aa17.3■□□□□ 0.36
LETMD1-220ENST00000549686 MTERF4Q7Z6M4 381 aaKnown RBP17.3■□□□□ 0.36
LETMD1-220ENST00000549686 OR2T34Q8NGX1 318 aa17.3■□□□□ 0.36
LETMD1-220ENST00000549686 AP2M1Q96CW1 435 aa17.3■□□□□ 0.36
LETMD1-220ENST00000549686 MCMBPQ9BTE3 642 aa17.3■□□□□ 0.36
LETMD1-220ENST00000549686 SPATA16Q9BXB7 569 aa17.3■□□□□ 0.36
LETMD1-220ENST00000549686 ABCG8Q9H221 673 aa17.3■□□□□ 0.36
LETMD1-220ENST00000549686 CENPHQ9H3R5 247 aa17.3■□□□□ 0.36
LETMD1-220ENST00000549686 MARCH4Q9P2E8 410 aaPredicted RBP17.3■□□□□ 0.36
LETMD1-220ENST00000549686 CRLS1Q9UJA2 301 aa17.3■□□□□ 0.36
LETMD1-220ENST00000549686 FNDC3AQ9Y2H6 1198 aaKnown RBP17.3■□□□□ 0.36
LETMD1-220ENST00000549686 PSAT1Q9Y617 370 aa17.3■□□□□ 0.36
LETMD1-220ENST00000549686 UGT1A9O60656 530 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 S1PR4O95977 384 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 AHSGP02765 367 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 ITGA2BP08514 1039 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 GM2AP17900 193 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 KRT15P19012 456 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 TEAD1P28347 426 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 PTGER3P43115 390 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 CXCL12P48061 93 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 MPP1Q00013 466 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 MTAPQ13126 283 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 SGCGQ13326 291 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 SETMARQ53H47 684 aaPredicted RBP17.29■□□□□ 0.36
LETMD1-220ENST00000549686 TNFAIP8L3Q5GJ75 292 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 TIFABQ6ZNK6 161 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 ZC3HC1Q86WB0 502 aaKnown RBP17.29■□□□□ 0.36
LETMD1-220ENST00000549686 HORMAD1Q86X24 394 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 VPS39Q96JC1 886 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 ATP6V1G3Q96LB4 118 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 VPS35Q96QK1 796 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 RIOK2Q9BVS4 552 aaKnown RBP17.29■□□□□ 0.36
LETMD1-220ENST00000549686 C1QTNF2Q9BXJ5 285 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms