RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 PTSQ03393 145 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 VAC14Q08AM6 782 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 NIPAL4Q0D2K0 466 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 C19orf57Q0VDD7 668 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 ILF3Q12906 894 aaKnown RBP eCLIP6.68□□□□□ -1.34
SCAF11-211ENST00000547950 SLC10A2Q12908 348 aaPredicted RBP6.68□□□□□ -1.34
SCAF11-211ENST00000547950 HLTFQ14527 1009 aaKnown RBP eCLIP6.68□□□□□ -1.346e-8■□□□□ 11
SCAF11-211ENST00000547950 SLC18A3Q16572 532 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 IFI16Q16666 785 aaKnown RBP6.68□□□□□ -1.34
SCAF11-211ENST00000547950 TAF1BQ53T94 588 aaPredicted RBP6.68□□□□□ -1.34
SCAF11-211ENST00000547950 PHF19Q5T6S3 580 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 KDELC2Q7Z4H8 507 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 SPRED1Q7Z699 444 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 TRIM74Q86UV6 250 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 NRROSQ86YC3 692 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 PQLC3Q8N755 202 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 RNF214Q8ND24 703 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 ARMC2Q8NEN0 867 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 LPCAT1Q8NF37 534 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 SLC35G2Q8TBE7 412 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 ARRDC2Q8TBH0 407 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 KIAA1524Q8TCG1 905 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 CCDC97Q96F63 343 aaPredicted RBP6.68□□□□□ -1.34
SCAF11-211ENST00000547950 CCDC42Q96M95 316 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 TMEM74Q96NL1 305 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 TSGA13Q96PP4 275 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 MCCC1Q96RQ3 725 aaPredicted RBP6.68□□□□□ -1.34
SCAF11-211ENST00000547950 AGAP2Q99490 1192 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 CHP1Q99653 195 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 ZNF670Q9BS34 389 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 RIOK2Q9BVS4 552 aaKnown RBP6.68□□□□□ -1.34
SCAF11-211ENST00000547950 MAK16Q9BXY0 300 aaKnown RBP6.68□□□□□ -1.34
SCAF11-211ENST00000547950 GSDMCQ9BYG8 508 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 FRMD8Q9BZ67 464 aaPredicted RBP6.68□□□□□ -1.34
SCAF11-211ENST00000547950 SEMA6CQ9H3T2 930 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 RDH14Q9HBH5 336 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 HAUS2Q9NVX0 235 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 TRNAU1APQ9NX07 287 aaKnown RBP6.68□□□□□ -1.34
SCAF11-211ENST00000547950 KCTD5Q9NXV2 234 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 TAAR2Q9P1P5 351 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 PISDQ9UG56 409 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 APPL1Q9UKG1 709 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 PPIL1Q9Y3C6 166 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 HEY1Q9Y5J3 304 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 LAMA5O15230 3695 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 ATRXP46100 2492 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 PTPRBP23467 1997 aa6.68□□□□□ -1.34
SCAF11-211ENST00000547950 A0A0J9YYE9 177 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 TEX51A0A1B0GUA7 166 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 LRRD1A4D1F6 860 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 CDRT15L2A8MXV6 281 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 CBFA2T2O43439 604 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 NUDT21O43809 227 aaKnown RBP6.67□□□□□ -1.34
SCAF11-211ENST00000547950 MAN1A2O60476 641 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 PRLP01236 227 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 TRBC1P01850 177 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 HLA-DQB2P05538 268 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 ITGA2BP08514 1039 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 TPM1P09493 284 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 TMEM253P0C7T8 217 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 BMP2P12643 396 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 PNLIPP16233 465 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 ITIH1P19827 911 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 PTMSP20962 102 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 CA4P22748 312 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 CCKBRP32239 447 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 CD86P42081 329 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 PPM1FP49593 454 aaPredicted RBP6.67□□□□□ -1.34
SCAF11-211ENST00000547950 STC1P52823 247 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 MAPK10P53779 464 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 B4GALNT1Q00973 533 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 ZFP36L1Q07352 338 aaKnown RBP6.67□□□□□ -1.34
SCAF11-211ENST00000547950 DPTQ07507 201 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 AP1B1Q10567 949 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 CLN3Q13286 438 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 EIF3IQ13347 325 aaKnown RBP6.67□□□□□ -1.34
SCAF11-211ENST00000547950 TGIF1Q15583 401 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 ASTE1Q2TB18 679 aaPredicted RBP6.67□□□□□ -1.34
SCAF11-211ENST00000547950 SKOR2Q2VWA4 1001 aaPredicted RBP6.67□□□□□ -1.34
SCAF11-211ENST00000547950 MAP9Q49MG5 647 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 ODF2Q5BJF6 829 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 NKAIN2Q5VXU1 208 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 IGF2-ASQ6U949 168 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 ADAMTSL4Q6UY14 1074 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 CCDC81Q6ZN84 652 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 B4GALNT4Q76KP1 1039 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 TMPRSS9Q7Z410 1059 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 PIM3Q86V86 326 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 CCDC13Q8IYE1 715 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 EXD1Q8NHP7 514 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.67□□□□□ -1.34
SCAF11-211ENST00000547950 PATE1Q8WXA2 126 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 MAML1Q92585 1016 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 LIN37Q96GY3 246 aaPredicted RBP6.67□□□□□ -1.34
SCAF11-211ENST00000547950 ZNF830Q96NB3 372 aaPredicted RBP6.67□□□□□ -1.34
SCAF11-211ENST00000547950 RNF157Q96PX1 679 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 DNAJC7Q99615 494 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 CMKLR1Q99788 373 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 CEP41Q9BYV8 373 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 NHEJ1Q9H9Q4 299 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms