RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 USP41Q3LFD5 358 aa2.26□□□□□ -2.05
CEP290-204ENST00000547926 C6orf141Q5SZD1 244 aa2.26□□□□□ -2.05
CEP290-204ENST00000547926 CDC73Q6P1J9 531 aa2.26□□□□□ -2.05
CEP290-204ENST00000547926 TSSK4Q6SA08 328 aa2.26□□□□□ -2.05
CEP290-204ENST00000547926 PCDH20Q8N6Y1 951 aaKnown RBP2.26□□□□□ -2.05
CEP290-204ENST00000547926 TSPYL6Q8N831 410 aa2.26□□□□□ -2.05
CEP290-204ENST00000547926 MAB21L3Q8N8X9 362 aa2.26□□□□□ -2.05
CEP290-204ENST00000547926 ACVR1CQ8NER5 493 aa2.26□□□□□ -2.05
CEP290-204ENST00000547926 OR5R1Q8NH85 324 aa2.26□□□□□ -2.05
CEP290-204ENST00000547926 IGSF8Q969P0 613 aa2.26□□□□□ -2.05
CEP290-204ENST00000547926 ORAI1Q96D31 301 aa2.26□□□□□ -2.05
CEP290-204ENST00000547926 FEM1CQ96JP0 617 aa2.26□□□□□ -2.05
CEP290-204ENST00000547926 TBATAQ96M53 351 aa2.26□□□□□ -2.05
CEP290-204ENST00000547926 MTERF1Q99551 399 aaKnown RBP2.26□□□□□ -2.05
CEP290-204ENST00000547926 SH3GL2Q99962 352 aa2.26□□□□□ -2.05
CEP290-204ENST00000547926 TMEM47Q9BQJ4 181 aa2.26□□□□□ -2.05
CEP290-204ENST00000547926 IFIH1Q9BYX4 1025 aaKnown RBP2.26□□□□□ -2.05
CEP290-204ENST00000547926 SLC28A3Q9HAS3 691 aa2.26□□□□□ -2.05
CEP290-204ENST00000547926 ASAH2Q9NR71 780 aa2.26□□□□□ -2.05
CEP290-204ENST00000547926 ZFP57Q9NU63 452 aa2.26□□□□□ -2.05
CEP290-204ENST00000547926 ACSS1Q9NUB1 689 aaPredicted RBP2.26□□□□□ -2.05
CEP290-204ENST00000547926 OR2W1Q9Y3N9 320 aa2.26□□□□□ -2.05
CEP290-204ENST00000547926 LOXL2Q9Y4K0 774 aa2.26□□□□□ -2.05
CEP290-204ENST00000547926 C1orf226A1L170 272 aa2.25□□□□□ -2.05
CEP290-204ENST00000547926 PRR23AA6NEV1 266 aa2.25□□□□□ -2.05
CEP290-204ENST00000547926 LDLRP01130 860 aa2.25□□□□□ -2.05
CEP290-204ENST00000547926 HOXB5P09067 269 aa2.25□□□□□ -2.05
CEP290-204ENST00000547926 MCM3P25205 808 aa2.25□□□□□ -2.05
CEP290-204ENST00000547926 PBX3P40426 434 aa2.25□□□□□ -2.05
CEP290-204ENST00000547926 RAD23BP54727 409 aa2.25□□□□□ -2.05
CEP290-204ENST00000547926 PDE1BQ01064 536 aa2.25□□□□□ -2.05
CEP290-204ENST00000547926 TROAPQ12815 778 aa2.25□□□□□ -2.05
CEP290-204ENST00000547926 TBX2Q13207 712 aaPredicted RBP2.25□□□□□ -2.05
CEP290-204ENST00000547926 DCTN2Q13561 401 aaKnown RBP2.25□□□□□ -2.05
CEP290-204ENST00000547926 KRT24Q2M2I5 525 aa2.25□□□□□ -2.05
CEP290-204ENST00000547926 ATF7IPQ6VMQ6 1270 aa2.25□□□□□ -2.05
CEP290-204ENST00000547926 DSTYKQ6XUX3 929 aa2.25□□□□□ -2.05
CEP290-204ENST00000547926 DPPA4Q7L190 304 aa2.25□□□□□ -2.05
CEP290-204ENST00000547926 NRROSQ86YC3 692 aa2.25□□□□□ -2.05
CEP290-204ENST00000547926 SRBD1Q8N5C6 995 aaKnown RBP2.25□□□□□ -2.05
CEP290-204ENST00000547926 OR14L1PQ8NHC6 308 aa2.25□□□□□ -2.05
CEP290-204ENST00000547926 MMABQ96EY8 250 aaPredicted RBP2.25□□□□□ -2.05
CEP290-204ENST00000547926 ACOX2Q99424 681 aa2.25□□□□□ -2.05
CEP290-204ENST00000547926 SEC62Q99442 399 aaKnown RBP2.25□□□□□ -2.05
CEP290-204ENST00000547926 PRKRIP1Q9H875 184 aaPredicted RBP2.25□□□□□ -2.05
CEP290-204ENST00000547926 PLEKHA5Q9HAU0 1116 aa2.25□□□□□ -2.05
CEP290-204ENST00000547926 KLHL1Q9NR64 748 aa2.25□□□□□ -2.05
CEP290-204ENST00000547926 TAS2R10Q9NYW0 307 aa2.25□□□□□ -2.05
CEP290-204ENST00000547926 CNOT8Q9UFF9 292 aaKnown RBP2.25□□□□□ -2.05
CEP290-204ENST00000547926 AMDHD2Q9Y303 409 aa2.25□□□□□ -2.05
CEP290-204ENST00000547926 SNED1Q8TER0 1413 aa2.25□□□□□ -2.05
CEP290-204ENST00000547926 A0A1W2PQF6 199 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 CCDC189A1A4V9 331 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 GOLGA6L9A6NEM1 432 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 TTC36A6NLP5 189 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 PAGE4O60829 102 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 CRYAAP02489 173 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 RRM1P23921 792 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 RARSP54136 660 aaKnown RBP2.24□□□□□ -2.05
CEP290-204ENST00000547926 F2RL1P55085 397 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 CSNK2A1P68400 391 aaPredicted RBP2.24□□□□□ -2.05
CEP290-204ENST00000547926 FOXD4Q12950 439 aaPredicted RBP2.24□□□□□ -2.05
CEP290-204ENST00000547926 G3BP1Q13283 466 aaKnown RBP eCLIP2.24□□□□□ -2.05
CEP290-204ENST00000547926 FRG1Q14331 258 aaKnown RBP2.24□□□□□ -2.05
CEP290-204ENST00000547926 SYT16Q17RD7 645 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 CDONQ4KMG0 1287 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 IRAK1BP1Q5VVH5 260 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 SIGIRRQ6IA17 410 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 GDPD4Q6W3E5 623 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 MARK2Q7KZI7 788 aaKnown RBP2.24□□□□□ -2.05
CEP290-204ENST00000547926 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.24□□□□□ -2.05
CEP290-204ENST00000547926 RNF113BQ8IZP6 322 aaKnown RBP2.24□□□□□ -2.05
CEP290-204ENST00000547926 LMNTD1Q8N9Z9 388 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 IL17RCQ8NAC3 791 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 CSNK2A3Q8NEV1 391 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 OR13A1Q8NGR1 328 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 INTS12Q96CB8 462 aaKnown RBP2.24□□□□□ -2.05
CEP290-204ENST00000547926 CDCA5Q96FF9 252 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 WDFY2Q96P53 400 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 PCGF1Q9BSM1 259 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 EGLN1Q9GZT9 426 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 MMP28Q9H239 520 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 MYH16Q9H6N6 1097 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 PGAP2Q9UHJ9 254 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 A0A1W2PPH5 198 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 ASPDHA6ND91 283 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 LILRA5A6NI73 299 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 EIF3CLB5ME19 914 aaKnown RBP2.24□□□□□ -2.05
CEP290-204ENST00000547926 C16orf97H3BN30 126 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 PAK4O96013 591 aaPredicted RBP2.24□□□□□ -2.05
CEP290-204ENST00000547926 SP1P08047 785 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 CETPP11597 493 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 GNL1P36915 607 aaPredicted RBP2.24□□□□□ -2.05
CEP290-204ENST00000547926 ARL1P40616 181 aaPredicted RBP2.24□□□□□ -2.05
CEP290-204ENST00000547926 CCR9P51686 369 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 OLR1P78380 273 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 FOXM1Q08050 763 aa2.24□□□□□ -2.05
CEP290-204ENST00000547926 TBCEQ15813 527 aaPredicted RBP2.24□□□□□ -2.05
CEP290-204ENST00000547926 TSTQ16762 297 aaKnown RBP2.24□□□□□ -2.05
CEP290-204ENST00000547926 INTS11Q5TA45 600 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms