RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 KIAA1522Q9P206 1035 aaPredicted RBP11.92□□□□□ -0.5
CCDC38-202ENST00000546386 ZNF711Q9Y462 761 aa11.92□□□□□ -0.5
CCDC38-202ENST00000546386 CCDC189A1A4V9 331 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 A8MT66 165 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 B2RBV5 119 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 BTN3A1O00481 513 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 BIRC5O15392 142 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 ESRRAP11474 423 aaPredicted RBP11.91□□□□□ -0.5
CCDC38-202ENST00000546386 PRDX3P30048 256 aaKnown RBP11.91□□□□□ -0.5
CCDC38-202ENST00000546386 SOX11P35716 441 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 FOXA1P55317 472 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 FAM83EQ2M2I3 478 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 TTC31Q49AM3 519 aaPredicted RBP11.91□□□□□ -0.5
CCDC38-202ENST00000546386 RALGPS1Q5JS13 557 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 LRRC66Q68CR7 880 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 SDCCAG8Q86SQ7 713 aaPredicted RBP11.91□□□□□ -0.5
CCDC38-202ENST00000546386 BEND7Q8N7W2 519 aaPredicted RBP11.91□□□□□ -0.5
CCDC38-202ENST00000546386 DCAF4L2Q8NA75 395 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 STYXQ8WUJ0 223 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 NUDT8Q8WV74 236 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 HERVK_113Q902F9 699 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 ZNF599Q96NL3 588 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 BIRC8Q96P09 236 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 TACO1Q9BSH4 297 aaKnown RBP11.91□□□□□ -0.5
CCDC38-202ENST00000546386 RPP25Q9BUL9 199 aaKnown RBP11.91□□□□□ -0.5
CCDC38-202ENST00000546386 CCDC68Q9H2F9 335 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 IL26Q9NPH9 171 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 NLE1Q9NVX2 485 aaPredicted RBP11.91□□□□□ -0.5
CCDC38-202ENST00000546386 GGA2Q9UJY4 613 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 OBSL1O75147 1896 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 DOCK9Q9BZ29 2069 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 EIF4E1BA6NMX2 242 aaKnown RBP11.91□□□□□ -0.5
CCDC38-202ENST00000546386 TARM1B6A8C7 271 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 E5RI56 91 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 AP3B1O00203 1094 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 LTA4HP09960 611 aaKnown RBP11.91□□□□□ -0.5
CCDC38-202ENST00000546386 PPP3CCP48454 512 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 POU4F1Q01851 419 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 NAB1Q13506 487 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 TCEA2Q15560 299 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 SLC44A4Q53GD3 710 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 ARSIQ5FYB1 569 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 MBOAT1Q6ZNC8 495 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 PIWIL4Q7Z3Z4 852 aaKnown RBP11.91□□□□□ -0.5
CCDC38-202ENST00000546386 ADIPOR2Q86V24 386 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 LMNTD1Q8N9Z9 388 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 GPR26Q8NDV2 337 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 FIBINQ8TAL6 211 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 CALML6Q8TD86 181 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 SKA2Q8WVK7 121 aaPredicted RBP11.91□□□□□ -0.5
CCDC38-202ENST00000546386 FOXJ1Q92949 421 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 NXPE3Q969Y0 559 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 CCDC124Q96CT7 223 aaKnown RBP11.91□□□□□ -0.5
CCDC38-202ENST00000546386 MRPL46Q9H2W6 279 aaKnown RBP11.91□□□□□ -0.5
CCDC38-202ENST00000546386 FBRSL1Q9HCM7 1045 aaKnown RBP11.91□□□□□ -0.5
CCDC38-202ENST00000546386 HSFX1Q9UBD0 423 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 STOML2Q9UJZ1 356 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 COQ6Q9Y2Z9 468 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 PKP3Q9Y446 797 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 TIMM22Q9Y584 194 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 COMMD10Q9Y6G5 202 aa11.91□□□□□ -0.5
CCDC38-202ENST00000546386 TRAFD1O14545 582 aaPredicted RBP11.9□□□□□ -0.5
CCDC38-202ENST00000546386 ZNF195O14628 629 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 SIN3BO75182 1162 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 PGLSO95336 258 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 PABPC1P11940 636 aaKnown RBP11.9□□□□□ -0.5
CCDC38-202ENST00000546386 GFAPP14136 432 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 GM2AP17900 193 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 LHCGRP22888 699 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 SESN3P58005 492 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 TAF1AQ15573 450 aaPredicted RBP11.9□□□□□ -0.5
CCDC38-202ENST00000546386 CHRNA6Q15825 494 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 CTSL3PQ5NE16 218 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 LIPMQ5VYY2 423 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 ZYG11AQ6WRX3 759 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 OR2AP1Q8NGE2 309 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 VOPP1Q96AW1 172 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 MKS1Q9NXB0 559 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 TAS2R1Q9NYW7 299 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 APOBEC2Q9Y235 224 aaKnown RBP11.9□□□□□ -0.5
CCDC38-202ENST00000546386 BTRCQ9Y297 605 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 ASB3Q9Y575 518 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 CCDC85CA6NKD9 419 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 SUPT3HB4E1H0 165 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 PRRT4C9JH25 899 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 GFRA2O00451 464 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 KLF11O14901 512 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 SUPT3HO75486 399 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 LEFTY1O75610 366 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 ZNF37AP17032 561 aaPredicted RBP11.9□□□□□ -0.5
CCDC38-202ENST00000546386 BPIP17213 487 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 GDF5P43026 501 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 SOX9P48436 509 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 TECRLQ5HYJ1 363 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 FAM78AQ5JUQ0 283 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 HABP4Q5JVS0 413 aaKnown RBP11.9□□□□□ -0.5
CCDC38-202ENST00000546386 SERPINA9Q86WD7 417 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 TTC30BQ8N4P2 665 aa11.9□□□□□ -0.5
CCDC38-202ENST00000546386 PTGR2Q8N8N7 351 aaPredicted RBP11.9□□□□□ -0.5
CCDC38-202ENST00000546386 TRPC4APQ8TEL6 797 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms