RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 SEPT10Q9P0V9 454 aa7.38□□□□□ -1.23
CPSF7-224ENST00000544990 SPASTQ9UBP0 616 aa7.38□□□□□ -1.23
CPSF7-224ENST00000544990 B4GALT6Q9UBX8 382 aa7.38□□□□□ -1.23
CPSF7-224ENST00000544990 GPN3Q9UHW5 284 aaPredicted RBP7.38□□□□□ -1.23
CPSF7-224ENST00000544990 AMFRQ9UKV5 643 aa7.38□□□□□ -1.23
CPSF7-224ENST00000544990 RPL26L1Q9UNX3 145 aaKnown RBP7.38□□□□□ -1.23
CPSF7-224ENST00000544990 REXO2Q9Y3B8 237 aaKnown RBP7.38□□□□□ -1.23
CPSF7-224ENST00000544990 PPIL1Q9Y3C6 166 aa7.38□□□□□ -1.23
CPSF7-224ENST00000544990 PCDHA3Q9Y5H8 950 aa7.38□□□□□ -1.23
CPSF7-224ENST00000544990 DUSP10Q9Y6W6 482 aa7.38□□□□□ -1.23
CPSF7-224ENST00000544990 DNAH14Q0VDD8 3507 aa7.38□□□□□ -1.23
CPSF7-224ENST00000544990 LAMA1P25391 3075 aa7.38□□□□□ -1.23
CPSF7-224ENST00000544990 SPTBN2O15020 2390 aa7.38□□□□□ -1.23
CPSF7-224ENST00000544990 A0A0J9YYE9 177 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 MACROD2A1Z1Q3 448 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 HACD1B0YJ81 288 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 CACNB4O00305 520 aaPredicted RBP7.37□□□□□ -1.23
CPSF7-224ENST00000544990 SCAMP1O15126 338 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 KRT86O43790 486 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 HEXIM1O94992 359 aaKnown RBP7.37□□□□□ -1.23
CPSF7-224ENST00000544990 TRBC1P01850 177 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 PCCBP05166 539 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 PDHA1P08559 390 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 C1SP09871 688 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 ATXN1LP0C7T5 689 aaKnown RBP7.37□□□□□ -1.23
CPSF7-224ENST00000544990 CTSEP14091 401 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 NME1P15531 152 aaKnown RBP7.37□□□□□ -1.23
CPSF7-224ENST00000544990 ZNF30P17039 623 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 CTPS1P17812 591 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 KELP23276 732 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 CTNNA2P26232 953 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 CTNNA1P35221 906 aaKnown RBP7.37□□□□□ -1.23
CPSF7-224ENST00000544990 CD86P42081 329 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 DUSP3P51452 185 aaPredicted RBP7.37□□□□□ -1.23
CPSF7-224ENST00000544990 RWDD2BP57060 319 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 PPARDQ03181 441 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 LLGL1Q15334 1064 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 TEX44Q53QW1 395 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 ZNF542PQ5EBM4 170 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 RNFT1Q5M7Z0 435 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 FAXCQ5TGI0 409 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 DENND2CQ68D51 928 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 CCDC70Q6NSX1 233 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 ENPP7Q6UWV6 458 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 MACC1Q6ZN28 852 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 KANSL1Q7Z3B3 1105 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 PEX26Q7Z412 305 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 SLCO6A1Q86UG4 719 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 NT5DC3Q86UY8 548 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 GALNT15Q8N3T1 639 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 SLC25A45Q8N413 288 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 CHCHD4Q8N4Q1 142 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 RNF10Q8N5U6 811 aaKnown RBP7.37□□□□□ -1.23
CPSF7-224ENST00000544990 UBL4BQ8N7F7 174 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 PNPLA1Q8N8W4 532 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 CCDC112Q8NEF3 446 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 OR4C6Q8NH72 309 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 ARRDC2Q8TBH0 407 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 NUDT8Q8WV74 236 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 UBE2Q2Q8WVN8 375 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 KRT35Q92764 455 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 NUS1Q96E22 293 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 TBATAQ96M53 351 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 AGAP3Q96P47 875 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 MCCC1Q96RQ3 725 aaPredicted RBP7.37□□□□□ -1.23
CPSF7-224ENST00000544990 VAT1Q99536 393 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 MLPHQ9BV36 600 aaPredicted RBP7.37□□□□□ -1.23
CPSF7-224ENST00000544990 SCNM1Q9BWG6 230 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 TDRD1Q9BXT4 1180 aaKnown RBP7.37□□□□□ -1.23
CPSF7-224ENST00000544990 ADGRE3Q9BY15 652 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 TSGA10Q9BZW7 698 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 PCDH9Q9HC56 1237 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 NLGN3Q9NZ94 848 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 APOBEC3BQ9UH17 382 aaKnown RBP7.37□□□□□ -1.23
CPSF7-224ENST00000544990 CHKBQ9Y259 395 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 EFR3BQ9Y2G0 817 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 PCDHGA1Q9Y5H4 931 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 CSNK1G3Q9Y6M4 447 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 EPG5Q9HCE0 2579 aa7.37□□□□□ -1.23
CPSF7-224ENST00000544990 ARID1BQ8NFD5 2236 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-224ENST00000544990 GRID2IPA4D2P6 1211 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 GOLGA6CA6NDK9 693 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 GOLGA6BA6NDN3 693 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 NPIPB15A6NHN6 443 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-224ENST00000544990 MIF4GDA9UHW6 222 aaKnown RBP7.36□□□□□ -1.23
CPSF7-224ENST00000544990 ANKRD66B4E2M5 251 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 H7C0C1 242 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 APOC4-APOC2K7ER74 178 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 TPP1O14773 563 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 FFAR2O15552 330 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 ARHGAP6O43182 974 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 AQP9O43315 295 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 SIGLEC6O43699 453 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 HYAL3O43820 417 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-224ENST00000544990 RFPL3O75679 317 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 TJP3O95049 919 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 RASGRP1O95267 797 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 TNFP01375 233 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 APOC2P02655 101 aa7.36□□□□□ -1.23
CPSF7-224ENST00000544990 PTMAP06454 111 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms